FFCP PHASE1:Mm9::chr11:11641846..11641861,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=40|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:11641846..11641861,+|id=chr11:11641846..11641861,+|ontology_enrichment_celltype=CL:0000791!2.80e-34!9;CL:0000789!2.80e-34!9;CL:0002420!2.80e-34!9;CL:0002419!2.80e-34!9;CL:0000790!2.80e-34!9;CL:0000624!1.02e-30!8;CL:0000084!8.52e-28!11;CL:0000827!8.52e-28!11;CL:0000838!2.31e-25!12;CL:0000893!1.87e-23!6;CL:0002489!1.87e-23!6;CL:0000898!1.87e-23!6;CL:0000809!1.87e-23!6;CL:0000810!1.87e-23!6;CL:0000895!1.87e-23!6;CL:0000808!1.87e-23!6;CL:0000894!1.87e-23!6;CL:0000806!1.87e-23!6;CL:0000807!1.87e-23!6;CL:0000805!1.87e-23!6;CL:0002425!1.87e-23!6;CL:0002436!1.87e-23!6;CL:0002427!1.87e-23!6;CL:0002428!1.87e-23!6;CL:0002429!1.87e-23!6;CL:0002433!1.87e-23!6;CL:0002431!1.87e-23!6;CL:0002432!1.87e-23!6;CL:0000542!2.65e-23!13;CL:0000051!2.65e-23!13;CL:0000738!1.75e-17!17;CL:0002087!1.75e-17!17;CL:0002031!2.01e-11!25;CL:0000988!1.33e-08!32;CL:0002032!1.33e-08!32;CL:0000037!1.33e-08!32;CL:0000566!1.33e-08!32;CL:0000837!1.33e-08!32|ontology_enrichment_celltype_v019_2=CL:0000624,2.11e-39,8;CL:0000791,4.33e-35,9;CL:0000789,4.33e-35,9;CL:0002420,4.33e-35,9;CL:0002419,4.33e-35,9;CL:0000790,4.33e-35,9;CL:0000893,4.28e-34,6;CL:0002489,4.28e-34,6;CL:0000898,4.28e-34,6;CL:0000809,4.28e-34,6;CL:0000810,4.28e-34,6;CL:0000895,4.28e-34,6;CL:0000808,4.28e-34,6;CL:0000894,4.28e-34,6;CL:0000806,4.28e-34,6;CL:0000807,4.28e-34,6;CL:0000805,4.28e-34,6;CL:0002425,4.28e-34,6;CL:0002436,4.28e-34,6;CL:0002427,4.28e-34,6;CL:0002428,4.28e-34,6;CL:0002429,4.28e-34,6;CL:0002433,4.28e-34,6;CL:0002431,4.28e-34,6;CL:0002432,4.28e-34,6;CL:0000084,8.23e-29,11;CL:0000827,8.23e-29,11;CL:0000838,1.87e-26,12;CL:0000542,1.86e-24,13;CL:0000051,1.86e-24,13;CL:0000738,8.20e-19,17;CL:0002087,8.20e-19,17;CL:0000815,1.55e-13,1;CL:0000792,1.55e-13,1;CL:0002031,6.45e-13,25;CL:0000988,3.68e-10,32;CL:0002032,3.68e-10,32;CL:0000037,3.68e-10,32;CL:0000837,3.68e-10,32;CL:0002320,3.85e-07,46;CL:0000134,3.85e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!7.73e-35!23;UBERON:0000974!7.73e-35!23;UBERON:0004807!7.73e-35!23;UBERON:0005058!7.73e-35!23;UBERON:0003351!7.73e-35!23;UBERON:0009113!7.73e-35!23;UBERON:0003295!7.73e-35!23;UBERON:0009722!7.73e-35!23;UBERON:0005562!7.73e-35!23;UBERON:0007690!7.73e-35!23;UBERON:0006562!2.84e-33!24;UBERON:0003408!2.84e-33!24;UBERON:0001557!2.84e-33!24;UBERON:0001042!2.84e-33!24;UBERON:0008814!2.84e-33!24;UBERON:0009145!2.84e-33!24;UBERON:0004177!6.59e-31!29;UBERON:0000072!2.84e-29!27;UBERON:0000065!9.86e-24!41;UBERON:0001004!4.29e-23!42;UBERON:0000063!5.96e-22!35;UBERON:0002390!7.15e-19!45;UBERON:0003061!7.15e-19!45;UBERON:0002193!1.66e-17!48;UBERON:0005057!2.66e-16!51;UBERON:0003929!6.00e-13!55;UBERON:0005911!7.92e-13!69;UBERON:0002368!1.24e-11!60;UBERON:0001041!1.92e-11!92;UBERON:0002405!4.64e-11!70;UBERON:0000077!1.13e-10!97;UBERON:0002530!1.61e-10!65;UBERON:0000490!2.56e-10!66;UBERON:0000949!3.19e-09!72;UBERON:0003081!3.52e-08!88;UBERON:0004921!2.10e-07!126;UBERON:0004185!2.10e-07!126;UBERON:0007811!2.92e-07!86;UBERON:0001007!3.12e-07!128;UBERON:0001555!3.12e-07!128;UBERON:0007026!3.12e-07!128;UBERON:0004119!4.58e-07!130;UBERON:0000925!4.58e-07!130;UBERON:0006595!4.58e-07!130;UBERON:0003104!5.52e-07!131;UBERON:0009142!5.52e-07!131;UBERON:0000064!6.19e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.30e-20,23;UBERON:0000974,8.30e-20,23;UBERON:0004807,8.30e-20,23;UBERON:0005058,8.30e-20,23;UBERON:0003351,8.30e-20,23;UBERON:0009113,8.30e-20,23;UBERON:0003295,8.30e-20,23;UBERON:0009722,8.30e-20,23;UBERON:0005562,8.30e-20,23;UBERON:0007690,8.30e-20,23;UBERON:0006562,5.37e-19,24;UBERON:0003408,5.37e-19,24;UBERON:0001557,5.37e-19,24;UBERON:0001042,5.37e-19,24;UBERON:0008814,5.37e-19,24;UBERON:0009145,5.37e-19,24;UBERON:0000072,6.38e-17,27;UBERON:0004177,8.94e-16,29;UBERON:0005057,8.94e-16,29;UBERON:0000077,4.07e-13,35;UBERON:0007811,9.27e-13,36;UBERON:0000065,3.14e-11,41;UBERON:0001004,5.74e-11,42;UBERON:0000153,1.02e-10,43;UBERON:0002390,3.00e-10,45;UBERON:0003061,3.00e-10,45;UBERON:0002193,1.28e-09,48;UBERON:0002405,1.28e-09,48;UBERON:0003929,2.06e-08,55;UBERON:0002368,1.01e-07,60;UBERON:0002384,3.85e-07,46;UBERON:0002530,3.91e-07,65;UBERON:0000490,5.00e-07,66|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,4.50523910885334,2.57470978954193,0.171217968225505,0.478632953972018,8.73123722649149,2.71003247498892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=40 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:11641846..11641861,+ | |||
|id=chr11:11641846..11641861,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.80e-34!9;CL:0000789!2.80e-34!9;CL:0002420!2.80e-34!9;CL:0002419!2.80e-34!9;CL:0000790!2.80e-34!9;CL:0000624!1.02e-30!8;CL:0000084!8.52e-28!11;CL:0000827!8.52e-28!11;CL:0000838!2.31e-25!12;CL:0000893!1.87e-23!6;CL:0002489!1.87e-23!6;CL:0000898!1.87e-23!6;CL:0000809!1.87e-23!6;CL:0000810!1.87e-23!6;CL:0000895!1.87e-23!6;CL:0000808!1.87e-23!6;CL:0000894!1.87e-23!6;CL:0000806!1.87e-23!6;CL:0000807!1.87e-23!6;CL:0000805!1.87e-23!6;CL:0002425!1.87e-23!6;CL:0002436!1.87e-23!6;CL:0002427!1.87e-23!6;CL:0002428!1.87e-23!6;CL:0002429!1.87e-23!6;CL:0002433!1.87e-23!6;CL:0002431!1.87e-23!6;CL:0002432!1.87e-23!6;CL:0000542!2.65e-23!13;CL:0000051!2.65e-23!13;CL:0000738!1.75e-17!17;CL:0002087!1.75e-17!17;CL:0002031!2.01e-11!25;CL:0000988!1.33e-08!32;CL:0002032!1.33e-08!32;CL:0000037!1.33e-08!32;CL:0000566!1.33e-08!32;CL:0000837!1.33e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.11e-39,8;CL:0000791,4.33e-35,9;CL:0000789,4.33e-35,9;CL:0002420,4.33e-35,9;CL:0002419,4.33e-35,9;CL:0000790,4.33e-35,9;CL:0000893,4.28e-34,6;CL:0002489,4.28e-34,6;CL:0000898,4.28e-34,6;CL:0000809,4.28e-34,6;CL:0000810,4.28e-34,6;CL:0000895,4.28e-34,6;CL:0000808,4.28e-34,6;CL:0000894,4.28e-34,6;CL:0000806,4.28e-34,6;CL:0000807,4.28e-34,6;CL:0000805,4.28e-34,6;CL:0002425,4.28e-34,6;CL:0002436,4.28e-34,6;CL:0002427,4.28e-34,6;CL:0002428,4.28e-34,6;CL:0002429,4.28e-34,6;CL:0002433,4.28e-34,6;CL:0002431,4.28e-34,6;CL:0002432,4.28e-34,6;CL:0000084,8.23e-29,11;CL:0000827,8.23e-29,11;CL:0000838,1.87e-26,12;CL:0000542,1.86e-24,13;CL:0000051,1.86e-24,13;CL:0000738,8.20e-19,17;CL:0002087,8.20e-19,17;CL:0000815,1.55e-13,1;CL:0000792,1.55e-13,1;CL:0002031,6.45e-13,25;CL:0000988,3.68e-10,32;CL:0002032,3.68e-10,32;CL:0000037,3.68e-10,32;CL:0000837,3.68e-10,32;CL:0002320,3.85e-07,46;CL:0000134,3.85e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!7.73e-35!23;UBERON:0000974!7.73e-35!23;UBERON:0004807!7.73e-35!23;UBERON:0005058!7.73e-35!23;UBERON:0003351!7.73e-35!23;UBERON:0009113!7.73e-35!23;UBERON:0003295!7.73e-35!23;UBERON:0009722!7.73e-35!23;UBERON:0005562!7.73e-35!23;UBERON:0007690!7.73e-35!23;UBERON:0006562!2.84e-33!24;UBERON:0003408!2.84e-33!24;UBERON:0001557!2.84e-33!24;UBERON:0001042!2.84e-33!24;UBERON:0008814!2.84e-33!24;UBERON:0009145!2.84e-33!24;UBERON:0004177!6.59e-31!29;UBERON:0000072!2.84e-29!27;UBERON:0000065!9.86e-24!41;UBERON:0001004!4.29e-23!42;UBERON:0000063!5.96e-22!35;UBERON:0002390!7.15e-19!45;UBERON:0003061!7.15e-19!45;UBERON:0002193!1.66e-17!48;UBERON:0005057!2.66e-16!51;UBERON:0003929!6.00e-13!55;UBERON:0005911!7.92e-13!69;UBERON:0002368!1.24e-11!60;UBERON:0001041!1.92e-11!92;UBERON:0002405!4.64e-11!70;UBERON:0000077!1.13e-10!97;UBERON:0002530!1.61e-10!65;UBERON:0000490!2.56e-10!66;UBERON:0000949!3.19e-09!72;UBERON:0003081!3.52e-08!88;UBERON:0004921!2.10e-07!126;UBERON:0004185!2.10e-07!126;UBERON:0007811!2.92e-07!86;UBERON:0001007!3.12e-07!128;UBERON:0001555!3.12e-07!128;UBERON:0007026!3.12e-07!128;UBERON:0004119!4.58e-07!130;UBERON:0000925!4.58e-07!130;UBERON:0006595!4.58e-07!130;UBERON:0003104!5.52e-07!131;UBERON:0009142!5.52e-07!131;UBERON:0000064!6.19e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.30e-20,23;UBERON:0000974,8.30e-20,23;UBERON:0004807,8.30e-20,23;UBERON:0005058,8.30e-20,23;UBERON:0003351,8.30e-20,23;UBERON:0009113,8.30e-20,23;UBERON:0003295,8.30e-20,23;UBERON:0009722,8.30e-20,23;UBERON:0005562,8.30e-20,23;UBERON:0007690,8.30e-20,23;UBERON:0006562,5.37e-19,24;UBERON:0003408,5.37e-19,24;UBERON:0001557,5.37e-19,24;UBERON:0001042,5.37e-19,24;UBERON:0008814,5.37e-19,24;UBERON:0009145,5.37e-19,24;UBERON:0000072,6.38e-17,27;UBERON:0004177,8.94e-16,29;UBERON:0005057,8.94e-16,29;UBERON:0000077,4.07e-13,35;UBERON:0007811,9.27e-13,36;UBERON:0000065,3.14e-11,41;UBERON:0001004,5.74e-11,42;UBERON:0000153,1.02e-10,43;UBERON:0002390,3.00e-10,45;UBERON:0003061,3.00e-10,45;UBERON:0002193,1.28e-09,48;UBERON:0002405,1.28e-09,48;UBERON:0003929,2.06e-08,55;UBERON:0002368,1.01e-07,60;UBERON:0002384,3.85e-07,46;UBERON:0002530,3.91e-07,65;UBERON:0000490,5.00e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,4.50523910885334,2.57470978954193,0.171217968225505,0.478632953972018,8.73123722649149,2.71003247498892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0,0,0.120195449519969,0.147689527174577,0.504832249740738,0.533447646584999,0.201652370273681,0.292373642219257,0.769694733122636,1.05189211963412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:11641846..11641861,+ | |||
}} |
Revision as of 18:52, 12 September 2013
Short description: | p@chr11:11641846..11641861, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:11641846..11641861, + |
Coexpression cluster: | MCL_coexpression_mm9:40 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 8.30e-20 | 23 |
neck | 8.30e-20 | 23 |
respiratory system epithelium | 8.30e-20 | 23 |
hemolymphoid system gland | 8.30e-20 | 23 |
pharyngeal epithelium | 8.30e-20 | 23 |
thymic region | 8.30e-20 | 23 |
pharyngeal gland | 8.30e-20 | 23 |
entire pharyngeal arch endoderm | 8.30e-20 | 23 |
thymus primordium | 8.30e-20 | 23 |
early pharyngeal endoderm | 8.30e-20 | 23 |
pharynx | 5.37e-19 | 24 |
gland of gut | 5.37e-19 | 24 |
upper respiratory tract | 5.37e-19 | 24 |
chordate pharynx | 5.37e-19 | 24 |
pharyngeal arch system | 5.37e-19 | 24 |
pharyngeal region of foregut | 5.37e-19 | 24 |
segment of respiratory tract | 6.38e-17 | 27 |
hemopoietic organ | 8.94e-16 | 29 |
immune organ | 8.94e-16 | 29 |
mixed endoderm/mesoderm-derived structure | 4.07e-13 | 35 |
craniocervical region | 9.27e-13 | 36 |
respiratory tract | 3.14e-11 | 41 |
respiratory system | 5.74e-11 | 42 |
anterior region of body | 1.02e-10 | 43 |
hematopoietic system | 3.00e-10 | 45 |
blood island | 3.00e-10 | 45 |
hemolymphoid system | 1.28e-09 | 48 |
immune system | 1.28e-09 | 48 |
gut epithelium | 2.06e-08 | 55 |
endocrine gland | 1.01e-07 | 60 |
connective tissue | 3.85e-07 | 46 |
gland | 3.91e-07 | 65 |
unilaminar epithelium | 5.00e-07 | 66 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.