FFCP PHASE1:Hg19::chr2:166428839..166428859,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80034|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30729|TSSclassifier=S|UniProt=Q8WYN3|association_with_transcript=0bp_to_ENST00000342316,NM_024969_5end|coexpression_cluster_id=C10|description=CAGE_peak_2_at_CSRNP3_5end|id=chr2:166428839..166428859,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000333;4.77e-09;5|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;4.35e-17;82|ontology_enrichment_disease=DOID:171!5.06e-09!10;DOID:169!8.71e-07!6|ontology_enrichment_disease_v019=DOID:171;2.60e-12;10!DOID:169;3.75e-11;6|ontology_enrichment_disease_v019_2=DOID:171,3.03e-12,10;DOID:169,4.06e-11,6|ontology_enrichment_uberon=UBERON:0007023!9.57e-48!115;UBERON:0000073!2.66e-45!94;UBERON:0001016!2.66e-45!94;UBERON:0001017!4.69e-45!82;UBERON:0005743!7.72e-44!86;UBERON:0001049!6.58e-42!57;UBERON:0005068!6.58e-42!57;UBERON:0006241!6.58e-42!57;UBERON:0007135!6.58e-42!57;UBERON:0002780!1.48e-38!41;UBERON:0001890!1.48e-38!41;UBERON:0006240!1.48e-38!41;UBERON:0002616!7.88e-38!59;UBERON:0001893!1.63e-37!34;UBERON:0002020!2.10e-37!34;UBERON:0003528!2.10e-37!34;UBERON:0003080!2.28e-37!42;UBERON:0000955!2.74e-37!69;UBERON:0006238!2.74e-37!69;UBERON:0002791!6.26e-36!33;UBERON:0001869!3.82e-35!32;UBERON:0002346!6.59e-34!90;UBERON:0002619!2.65e-33!22;UBERON:0003075!1.84e-31!86;UBERON:0007284!1.84e-31!86;UBERON:0001950!1.24e-30!20;UBERON:0000956!1.62e-28!25;UBERON:0000203!1.62e-28!25;UBERON:0003056!9.56e-27!61;UBERON:0000924!1.45e-26!173;UBERON:0006601!1.45e-26!173;UBERON:0004121!1.54e-24!169;UBERON:0000153!1.13e-22!129;UBERON:0007811!1.13e-22!129;UBERON:0000033!1.82e-21!123;UBERON:0000200!6.65e-11!6;UBERON:0001871!1.98e-10!7;UBERON:0002420!1.99e-10!9;UBERON:0007245!1.99e-10!9;UBERON:0010009!1.99e-10!9;UBERON:0010011!1.99e-10!9;UBERON:0000454!1.99e-10!9;UBERON:0002308!3.14e-10!9;UBERON:0000125!3.14e-10!9;UBERON:0001872!1.82e-09!5;UBERON:0002021!2.30e-09!5;UBERON:0002298!4.94e-09!8;UBERON:0000349!1.18e-08!5;UBERON:0000064!1.05e-07!219;UBERON:0009663!1.17e-07!7;UBERON:0000025!1.48e-07!194|ontology_enrichment_uberon_v019=UBERON:0002619;4.23e-58;22!UBERON:0001950;2.15e-53;20!UBERON:0001869;6.62e-52;32!UBERON:0000956;1.23e-50;25!UBERON:0000203;1.23e-50;25!UBERON:0003528;1.58e-50;34!UBERON:0002020;1.58e-50;34!UBERON:0001893;3.13e-50;34!UBERON:0002791;3.98e-48;32!UBERON:0002780;8.29e-42;41!UBERON:0001890;8.29e-42;41!UBERON:0000073;1.41e-33;53!UBERON:0002616;1.41e-33;53!UBERON:0000955;2.07e-25;68!UBERON:0001017;7.40e-25;75!UBERON:0001016;2.16e-22;83!UBERON:0000200;4.68e-18;6!UBERON:0001872;1.58e-15;5!UBERON:0002021;2.60e-15;5!UBERON:0001871;6.04e-15;6!UBERON:0000349;5.35e-14;5!UBERON:0002298;4.05e-11;6!UBERON:0002420;1.61e-10;9!UBERON:0007245;1.61e-10;9!UBERON:0010009;1.61e-10;9!UBERON:0010011;1.61e-10;9!UBERON:0000454;1.61e-10;9!UBERON:0011216;1.89e-10;132!UBERON:0000125;2.72e-10;9!UBERON:0002308;2.72e-10;9!UBERON:0001870;5.54e-10;3!UBERON:0000013;4.77e-09;5!UBERON:0002410;4.77e-09;5!UBERON:0000988;8.30e-09;3!UBERON:0007023;2.34e-08;114!UBERON:0002702;4.07e-07;2!UBERON:0002771;4.86e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.05e-68,89;UBERON:0001017,8.22e-65,81;UBERON:0000073,6.25e-60,53;UBERON:0002616,6.25e-60,53;UBERON:0001049,1.54e-59,56;UBERON:0005068,1.54e-59,56;UBERON:0006241,1.54e-59,56;UBERON:0007135,1.54e-59,56;UBERON:0001893,4.44e-59,34;UBERON:0001869,6.42e-59,32;UBERON:0003528,6.84e-59,34;UBERON:0002020,6.84e-59,34;UBERON:0002780,1.08e-58,41;UBERON:0001890,1.08e-58,41;UBERON:0003080,1.08e-58,41;UBERON:0006240,1.08e-58,41;UBERON:0002619,3.57e-58,22;UBERON:0000955,1.60e-55,68;UBERON:0006238,1.60e-55,68;UBERON:0002791,3.36e-54,32;UBERON:0001950,1.97e-53,20;UBERON:0000956,1.06e-50,25;UBERON:0000203,1.06e-50,25;UBERON:0002346,5.65e-42,86;UBERON:0003075,8.84e-40,82;UBERON:0007284,8.84e-40,82;UBERON:0004121,1.19e-39,171;UBERON:0000924,1.19e-39,171;UBERON:0006601,1.19e-39,171;UBERON:0003056,2.62e-39,61;UBERON:0010371,6.77e-35,104;UBERON:0011216,5.29e-26,223;UBERON:0007023,6.20e-26,114;UBERON:0010314,3.40e-25,132;UBERON:0000200,4.90e-18,6;UBERON:0001872,1.68e-15,5;UBERON:0002021,2.53e-15,5;UBERON:0001871,5.57e-15,6;UBERON:0000349,4.54e-14,5;UBERON:0000025,2.83e-12,192;UBERON:0002298,3.97e-11,6;UBERON:0002420,1.33e-10,9;UBERON:0007245,1.33e-10,9;UBERON:0010009,1.33e-10,9;UBERON:0010011,1.33e-10,9;UBERON:0000454,1.33e-10,9;UBERON:0000125,2.46e-10,9;UBERON:0002308,2.46e-10,9;UBERON:0001870,5.46e-10,3;UBERON:0000013,4.53e-09,5;UBERON:0002410,4.53e-09,5;UBERON:0000988,7.87e-09,3;UBERON:0004111,1.26e-08,240;UBERON:0000483,6.43e-08,306;UBERON:0000119,9.68e-08,309;UBERON:0002702,4.02e-07,2;UBERON:0002771,4.93e-07,2;UBERON:0001876,9.59e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80034 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30729 | |||
|TSSclassifier=S | |||
|UniProt=Q8WYN3 | |||
|association_with_transcript=0bp_to_ENST00000342316,NM_024969_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_CSRNP3_5end | |||
|id=chr2:166428839..166428859,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;4.77e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.35e-17;82 | |||
|ontology_enrichment_disease=DOID:171!5.06e-09!10;DOID:169!8.71e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:171;2.60e-12;10!DOID:169;3.75e-11;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.03e-12,10;DOID:169,4.06e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.57e-48!115;UBERON:0000073!2.66e-45!94;UBERON:0001016!2.66e-45!94;UBERON:0001017!4.69e-45!82;UBERON:0005743!7.72e-44!86;UBERON:0001049!6.58e-42!57;UBERON:0005068!6.58e-42!57;UBERON:0006241!6.58e-42!57;UBERON:0007135!6.58e-42!57;UBERON:0002780!1.48e-38!41;UBERON:0001890!1.48e-38!41;UBERON:0006240!1.48e-38!41;UBERON:0002616!7.88e-38!59;UBERON:0001893!1.63e-37!34;UBERON:0002020!2.10e-37!34;UBERON:0003528!2.10e-37!34;UBERON:0003080!2.28e-37!42;UBERON:0000955!2.74e-37!69;UBERON:0006238!2.74e-37!69;UBERON:0002791!6.26e-36!33;UBERON:0001869!3.82e-35!32;UBERON:0002346!6.59e-34!90;UBERON:0002619!2.65e-33!22;UBERON:0003075!1.84e-31!86;UBERON:0007284!1.84e-31!86;UBERON:0001950!1.24e-30!20;UBERON:0000956!1.62e-28!25;UBERON:0000203!1.62e-28!25;UBERON:0003056!9.56e-27!61;UBERON:0000924!1.45e-26!173;UBERON:0006601!1.45e-26!173;UBERON:0004121!1.54e-24!169;UBERON:0000153!1.13e-22!129;UBERON:0007811!1.13e-22!129;UBERON:0000033!1.82e-21!123;UBERON:0000200!6.65e-11!6;UBERON:0001871!1.98e-10!7;UBERON:0002420!1.99e-10!9;UBERON:0007245!1.99e-10!9;UBERON:0010009!1.99e-10!9;UBERON:0010011!1.99e-10!9;UBERON:0000454!1.99e-10!9;UBERON:0002308!3.14e-10!9;UBERON:0000125!3.14e-10!9;UBERON:0001872!1.82e-09!5;UBERON:0002021!2.30e-09!5;UBERON:0002298!4.94e-09!8;UBERON:0000349!1.18e-08!5;UBERON:0000064!1.05e-07!219;UBERON:0009663!1.17e-07!7;UBERON:0000025!1.48e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.23e-58;22!UBERON:0001950;2.15e-53;20!UBERON:0001869;6.62e-52;32!UBERON:0000956;1.23e-50;25!UBERON:0000203;1.23e-50;25!UBERON:0003528;1.58e-50;34!UBERON:0002020;1.58e-50;34!UBERON:0001893;3.13e-50;34!UBERON:0002791;3.98e-48;32!UBERON:0002780;8.29e-42;41!UBERON:0001890;8.29e-42;41!UBERON:0000073;1.41e-33;53!UBERON:0002616;1.41e-33;53!UBERON:0000955;2.07e-25;68!UBERON:0001017;7.40e-25;75!UBERON:0001016;2.16e-22;83!UBERON:0000200;4.68e-18;6!UBERON:0001872;1.58e-15;5!UBERON:0002021;2.60e-15;5!UBERON:0001871;6.04e-15;6!UBERON:0000349;5.35e-14;5!UBERON:0002298;4.05e-11;6!UBERON:0002420;1.61e-10;9!UBERON:0007245;1.61e-10;9!UBERON:0010009;1.61e-10;9!UBERON:0010011;1.61e-10;9!UBERON:0000454;1.61e-10;9!UBERON:0011216;1.89e-10;132!UBERON:0000125;2.72e-10;9!UBERON:0002308;2.72e-10;9!UBERON:0001870;5.54e-10;3!UBERON:0000013;4.77e-09;5!UBERON:0002410;4.77e-09;5!UBERON:0000988;8.30e-09;3!UBERON:0007023;2.34e-08;114!UBERON:0002702;4.07e-07;2!UBERON:0002771;4.86e-07;2 | |||
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|short_description=p2@CSRNP3 | |||
}} |
Revision as of 14:29, 12 September 2013
Short description: | p2@CSRNP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CSRNP3_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000342316, NM_024969_5end |
EntrezGene: | CSRNP3 |
HGNC: | 30729 |
UniProt: | Q8WYN3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.03e-12 | 10 |
neuroendocrine tumor | 4.06e-11 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.