FFCP PHASE1:Hg19::chr1:6508082..6508098,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83715|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13281|TSSclassifier=S|UniProt=|association_with_transcript=-4bp_to_ENST00000461727,uc001amz.2_5end|description=CAGE_peak_7_at_ESPN_5end|id=chr1:6508082..6508098,+|ontology_enrichment_celltype=CL:0002322!1.79e-12!5|ontology_enrichment_celltype_v019=CL:0000182;3.05e-16;12!CL:0002322;5.81e-07;5|ontology_enrichment_celltype_v019_2=CL:0000182,3.15e-16,12;CL:0002322,8.34e-07,5|ontology_enrichment_development_v019=UBERON:0004161;5.76e-18;11!UBERON:0009497;3.51e-15;13!UBERON:0001041;2.88e-12;30|ontology_enrichment_disease=DOID:305!7.73e-07!106|ontology_enrichment_disease_v019=DOID:4362;3.46e-07;5|ontology_enrichment_disease_v019_2=DOID:4362,3.06e-07,5;DOID:305,4.34e-07,106|ontology_enrichment_uberon=UBERON:0009497!2.43e-08!25;UBERON:0000015!2.43e-08!25;UBERON:0002423!2.43e-08!25;UBERON:0006235!2.43e-08!25;UBERON:0004161!2.43e-08!25;UBERON:0004921!1.25e-07!129;UBERON:0004185!1.25e-07!129|ontology_enrichment_uberon_v019=UBERON:0002423;7.18e-19;25!UBERON:0002107;1.76e-14;19!UBERON:0006925;1.76e-14;19!UBERON:0002108;3.48e-14;4!UBERON:0002114;4.89e-11;2!UBERON:0000160;1.80e-10;17!UBERON:0004913;6.72e-09;1!UBERON:0003703;6.72e-09;1!UBERON:0001174;6.72e-09;1!UBERON:0004914;6.72e-09;1!UBERON:0002365;3.29e-08;31!UBERON:0002330;3.29e-08;31!UBERON:0005409;3.73e-08;22!UBERON:0002368;5.99e-08;33|ontology_enrichment_uberon_v019_2=UBERON:0009497,7.46e-19,25;UBERON:0000015,7.46e-19,25;UBERON:0002423,7.46e-19,25;UBERON:0006235,7.46e-19,25;UBERON:0004161,7.46e-19,25;UBERON:0008835,1.33e-16,22;UBERON:0003894,1.33e-16,22;UBERON:0009854,7.58e-16,23;UBERON:0007499,1.62e-14,25;UBERON:0002107,1.78e-14,19;UBERON:0006925,1.78e-14,19;UBERON:0008836,1.78e-14,19;UBERON:0002108,4.18e-14,4;UBERON:0009856,6.27e-14,26;UBERON:0002114,8.14e-11,2;UBERON:0000160,1.66e-10,17;UBERON:0004921,9.91e-09,118;UBERON:0004913,1.07e-08,1;UBERON:0003703,1.07e-08,1;UBERON:0001174,1.07e-08,1;UBERON:0004914,1.07e-08,1;UBERON:0002365,1.12e-08,31;UBERON:0002330,1.12e-08,31;UBERON:0003929,3.77e-08,54;UBERON:0005911,6.28e-08,82;UBERON:0001007,6.76e-08,145;UBERON:0001555,6.76e-08,145;UBERON:0007026,6.76e-08,145;UBERON:0002368,1.27e-07,35;UBERON:0005409,3.25e-07,25;UBERON:0004119,6.33e-07,160;UBERON:0000925,6.33e-07,160;UBERON:0006595,6.33e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57204305099666,0.411202997999018,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0.68725489096526,0.506039384039006,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.662648841607426,1.04574548582567,0.829288440122964,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.659006605437454,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.80218419206545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0.0897576444097721,0.651884231532048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.973033209536731,4.888241159469,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,1.95551382734803,0.400794101257669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49487848582361,4.25429184459008,3.87354534391482,4.51603743823039,0,0,0.795229689809303,0,1.44677833618517,0.962776056180637,1.24632101408756,0,0,0,0,0,0.104909176269996,0,0.179287339332845,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0.58620893471233,5.30027555648885,0,0,0,0,0,0.157204305099666,0,0,0,0.243585196761792,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0.936669811613763,2.60857851499485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,1.03499260351932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0.560544326627578,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,1.63757624423474,0.596852325484105,0,0,0,5.28369952483357,0.231522474323834,1.96703604453562,2.82190377816914,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,8.3451021356735,0.730336388246517,0,0,0,0,0,1.0580536810308,0,0,0,0,0.218531143927391,0,0.407955318967927,0,0.459474497674225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0.244209805832924,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0|short_description=p7@ESPN}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=83715 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13281 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-4bp_to_ENST00000461727,uc001amz.2_5end | |||
|description=CAGE_peak_7_at_ESPN_5end | |||
|id=chr1:6508082..6508098,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.79e-12!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.05e-16;12!CL:0002322;5.81e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.15e-16,12;CL:0002322,8.34e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.76e-18;11!UBERON:0009497;3.51e-15;13!UBERON:0001041;2.88e-12;30 | |||
|ontology_enrichment_disease=DOID:305!7.73e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:4362;3.46e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,3.06e-07,5;DOID:305,4.34e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0009497!2.43e-08!25;UBERON:0000015!2.43e-08!25;UBERON:0002423!2.43e-08!25;UBERON:0006235!2.43e-08!25;UBERON:0004161!2.43e-08!25;UBERON:0004921!1.25e-07!129;UBERON:0004185!1.25e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;7.18e-19;25!UBERON:0002107;1.76e-14;19!UBERON:0006925;1.76e-14;19!UBERON:0002108;3.48e-14;4!UBERON:0002114;4.89e-11;2!UBERON:0000160;1.80e-10;17!UBERON:0004913;6.72e-09;1!UBERON:0003703;6.72e-09;1!UBERON:0001174;6.72e-09;1!UBERON:0004914;6.72e-09;1!UBERON:0002365;3.29e-08;31!UBERON:0002330;3.29e-08;31!UBERON:0005409;3.73e-08;22!UBERON:0002368;5.99e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,7.46e-19,25;UBERON:0000015,7.46e-19,25;UBERON:0002423,7.46e-19,25;UBERON:0006235,7.46e-19,25;UBERON:0004161,7.46e-19,25;UBERON:0008835,1.33e-16,22;UBERON:0003894,1.33e-16,22;UBERON:0009854,7.58e-16,23;UBERON:0007499,1.62e-14,25;UBERON:0002107,1.78e-14,19;UBERON:0006925,1.78e-14,19;UBERON:0008836,1.78e-14,19;UBERON:0002108,4.18e-14,4;UBERON:0009856,6.27e-14,26;UBERON:0002114,8.14e-11,2;UBERON:0000160,1.66e-10,17;UBERON:0004921,9.91e-09,118;UBERON:0004913,1.07e-08,1;UBERON:0003703,1.07e-08,1;UBERON:0001174,1.07e-08,1;UBERON:0004914,1.07e-08,1;UBERON:0002365,1.12e-08,31;UBERON:0002330,1.12e-08,31;UBERON:0003929,3.77e-08,54;UBERON:0005911,6.28e-08,82;UBERON:0001007,6.76e-08,145;UBERON:0001555,6.76e-08,145;UBERON:0007026,6.76e-08,145;UBERON:0002368,1.27e-07,35;UBERON:0005409,3.25e-07,25;UBERON:0004119,6.33e-07,160;UBERON:0000925,6.33e-07,160;UBERON:0006595,6.33e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57204305099666,0.411202997999018,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0.68725489096526,0.506039384039006,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.662648841607426,1.04574548582567,0.829288440122964,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.659006605437454,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.80218419206545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0.0897576444097721,0.651884231532048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.973033209536731,4.888241159469,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,1.95551382734803,0.400794101257669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49487848582361,4.25429184459008,3.87354534391482,4.51603743823039,0,0,0.795229689809303,0,1.44677833618517,0.962776056180637,1.24632101408756,0,0,0,0,0,0.104909176269996,0,0.179287339332845,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0.58620893471233,5.30027555648885,0,0,0,0,0,0.157204305099666,0,0,0,0.243585196761792,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0.936669811613763,2.60857851499485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,1.03499260351932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0.560544326627578,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,1.63757624423474,0.596852325484105,0,0,0,5.28369952483357,0.231522474323834,1.96703604453562,2.82190377816914,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,8.3451021356735,0.730336388246517,0,0,0,0,0,1.0580536810308,0,0,0,0,0.218531143927391,0,0.407955318967927,0,0.459474497674225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0.244209805832924,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | |||
|short_description=p7@ESPN | |||
}} |
Revision as of 06:25, 12 September 2013
Short description: | p7@ESPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_ESPN_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000461727, uc001amz.2_5end |
EntrezGene: | ESPN |
HGNC: | 13281 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.15e-16 | 12 |
embryonic stem cell | 8.34e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 7.46e-19 | 25 |
anatomical boundary | 7.46e-19 | 25 |
hepatobiliary system | 7.46e-19 | 25 |
foregut-midgut junction | 7.46e-19 | 25 |
septum transversum | 7.46e-19 | 25 |
hepatic diverticulum | 1.33e-16 | 22 |
liver primordium | 1.33e-16 | 22 |
digestive tract diverticulum | 7.58e-16 | 23 |
epithelial sac | 1.62e-14 | 25 |
liver | 1.78e-14 | 19 |
digestive gland | 1.78e-14 | 19 |
liver bud | 1.78e-14 | 19 |
small intestine | 4.18e-14 | 4 |
sac | 6.27e-14 | 26 |
duodenum | 8.14e-11 | 2 |
intestine | 1.66e-10 | 17 |
subdivision of digestive tract | 9.91e-09 | 118 |
hepatopancreatic ampulla | 1.07e-08 | 1 |
extrahepatic bile duct | 1.07e-08 | 1 |
common bile duct | 1.07e-08 | 1 |
duodenal papilla | 1.07e-08 | 1 |
exocrine gland | 1.12e-08 | 31 |
exocrine system | 1.12e-08 | 31 |
gut epithelium | 3.77e-08 | 54 |
endo-epithelium | 6.28e-08 | 82 |
digestive system | 6.76e-08 | 145 |
digestive tract | 6.76e-08 | 145 |
primitive gut | 6.76e-08 | 145 |
endocrine gland | 1.27e-07 | 35 |
gastrointestinal system | 3.25e-07 | 25 |
endoderm-derived structure | 6.33e-07 | 160 |
endoderm | 6.33e-07 | 160 |
presumptive endoderm | 6.33e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.06e-07 | 5 |
carcinoma | 4.34e-07 | 106 |
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