FFCP PHASE1:Hg19::chr1:240255198..240255211,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56776|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14074|TSSclassifier=S|UniProt=Q9HBL1,Q9NZ56|association_with_transcript=13bp_to_NM_020066,uc010pyd.1,uc010pye.1_5end|coexpression_cluster_id=C2556|description=CAGE_peak_3_at_FMN2_5end|id=chr1:240255198..240255211,+|ontology_enrichment_celltype=CL:0000055!1.90e-17!180;CL:0000057!2.78e-15!75;CL:0002620!5.11e-12!23;CL:0000133!2.77e-07!59|ontology_enrichment_celltype_v019=CL:0002620;2.90e-13;23|ontology_enrichment_celltype_v019_2=CL:0002620,2.57e-13,23;CL:0000057,3.83e-07,76|ontology_enrichment_development_v019=UBERON:0006601;1.50e-12;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;2.67e-07;5!DOID:450;2.67e-07;5!DOID:66;2.67e-07;5!DOID:423;2.67e-07;5!DOID:0080000;2.67e-07;5!DOID:11722;2.67e-07;5|ontology_enrichment_disease_v019_2=DOID:17,2.33e-07,5;DOID:450,2.33e-07,5;DOID:66,2.33e-07,5;DOID:423,2.33e-07,5;DOID:0080000,2.33e-07,5;DOID:11722,2.33e-07,5|ontology_enrichment_uberon=UBERON:0000073!3.61e-43!94;UBERON:0001016!3.61e-43!94;UBERON:0005743!2.46e-42!86;UBERON:0001017!1.99e-40!82;UBERON:0001049!3.00e-40!57;UBERON:0005068!3.00e-40!57;UBERON:0006241!3.00e-40!57;UBERON:0007135!3.00e-40!57;UBERON:0000955!3.45e-38!69;UBERON:0006238!3.45e-38!69;UBERON:0002616!2.70e-35!59;UBERON:0003075!2.24e-33!86;UBERON:0007284!2.24e-33!86;UBERON:0002780!4.63e-31!41;UBERON:0001890!4.63e-31!41;UBERON:0006240!4.63e-31!41;UBERON:0002346!1.49e-30!90;UBERON:0003080!7.26e-30!42;UBERON:0003056!5.63e-27!61;UBERON:0004121!9.99e-27!169;UBERON:0000033!3.09e-26!123;UBERON:0002020!4.21e-26!34;UBERON:0003528!4.21e-26!34;UBERON:0001893!4.93e-26!34;UBERON:0000924!3.32e-25!173;UBERON:0006601!3.32e-25!173;UBERON:0002791!3.67e-25!33;UBERON:0001869!1.59e-24!32;UBERON:0000153!1.63e-23!129;UBERON:0007811!1.63e-23!129;UBERON:0000475!2.14e-19!365;UBERON:0000956!4.71e-19!25;UBERON:0000203!4.71e-19!25;UBERON:0002619!2.01e-18!22;UBERON:0001950!8.59e-17!20;UBERON:0007023!6.04e-14!115;UBERON:0003076!2.78e-11!15;UBERON:0003057!2.78e-11!15;UBERON:0002097!8.21e-10!40;UBERON:0002199!2.10e-09!45;UBERON:0002416!2.10e-09!45;UBERON:0004733!4.73e-09!12;UBERON:0002028!4.73e-09!12;UBERON:0007277!4.73e-09!12;UBERON:0002420!1.35e-08!9;UBERON:0007245!1.35e-08!9;UBERON:0010009!1.35e-08!9;UBERON:0010011!1.35e-08!9;UBERON:0000454!1.35e-08!9;UBERON:0002308!1.70e-08!9;UBERON:0000125!1.70e-08!9;UBERON:0000483!2.35e-08!309;UBERON:0000064!4.54e-08!219;UBERON:0004732!5.21e-08!13;UBERON:0000119!5.78e-08!312;UBERON:0000025!1.19e-07!194;UBERON:0009663!8.54e-07!7|ontology_enrichment_uberon_v019=UBERON:0002780;9.24e-34;41!UBERON:0001890;9.24e-34;41!UBERON:0001893;9.94e-33;34!UBERON:0003528;1.67e-32;34!UBERON:0002020;1.67e-32;34!UBERON:0000073;3.76e-32;53!UBERON:0002616;3.76e-32;53!UBERON:0001869;5.36e-32;32!UBERON:0002791;7.83e-32;32!UBERON:0002619;3.27e-31;22!UBERON:0001950;1.96e-28;20!UBERON:0000956;1.09e-26;25!UBERON:0000203;1.09e-26;25!UBERON:0000955;1.56e-22;68!UBERON:0001017;2.42e-22;75!UBERON:0001016;7.77e-21;83!UBERON:0002420;1.04e-13;9!UBERON:0007245;1.04e-13;9!UBERON:0010009;1.04e-13;9!UBERON:0010011;1.04e-13;9!UBERON:0000454;1.04e-13;9!UBERON:0000125;1.50e-13;9!UBERON:0002308;1.50e-13;9!UBERON:0009663;1.30e-10;7!UBERON:0000200;4.94e-10;6!UBERON:0002298;6.04e-10;6!UBERON:0004733;6.83e-10;12!UBERON:0002028;6.83e-10;12!UBERON:0001894;7.16e-10;7!UBERON:0002097;1.32e-09;41!UBERON:0011216;2.99e-09;132!UBERON:0004732;5.92e-09;13!UBERON:0000349;6.14e-09;5!UBERON:0002021;9.11e-09;5!UBERON:0001872;9.62e-09;5!UBERON:0001871;1.17e-08;6!UBERON:0010314;1.24e-07;132!UBERON:0002199;1.29e-07;46!UBERON:0002416;1.29e-07;46!UBERON:0007023;2.72e-07;114!UBERON:0000369;3.51e-07;4!UBERON:0002435;3.51e-07;4!UBERON:0000204;3.51e-07;4!UBERON:0002784;9.21e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.59e-60,56;UBERON:0005068,5.59e-60,56;UBERON:0006241,5.59e-60,56;UBERON:0007135,5.59e-60,56;UBERON:0000073,7.16e-56,53;UBERON:0002616,7.16e-56,53;UBERON:0001017,2.80e-52,81;UBERON:0001016,5.40e-52,89;UBERON:0000955,7.07e-50,68;UBERON:0006238,7.07e-50,68;UBERON:0002780,2.91e-47,41;UBERON:0001890,2.91e-47,41;UBERON:0003080,2.91e-47,41;UBERON:0006240,2.91e-47,41;UBERON:0003075,3.31e-46,82;UBERON:0007284,3.31e-46,82;UBERON:0002346,3.47e-43,86;UBERON:0010371,7.10e-41,104;UBERON:0003528,1.03e-38,34;UBERON:0002020,1.03e-38,34;UBERON:0001893,1.34e-38,34;UBERON:0003056,3.46e-36,61;UBERON:0001869,5.15e-36,32;UBERON:0002791,9.42e-36,32;UBERON:0004121,1.47e-35,171;UBERON:0000924,1.47e-35,171;UBERON:0006601,1.47e-35,171;UBERON:0002619,3.28e-31,22;UBERON:0010314,1.15e-30,132;UBERON:0001950,2.21e-28,20;UBERON:0000956,1.10e-26,25;UBERON:0000203,1.10e-26,25;UBERON:0007023,4.17e-20,114;UBERON:0011216,2.73e-17,223;UBERON:0002420,1.08e-13,9;UBERON:0007245,1.08e-13,9;UBERON:0010009,1.08e-13,9;UBERON:0010011,1.08e-13,9;UBERON:0000454,1.08e-13,9;UBERON:0000125,1.60e-13,9;UBERON:0002308,1.60e-13,9;UBERON:0003076,1.68e-13,15;UBERON:0003057,1.68e-13,15;UBERON:0002097,1.42e-12,4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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56776 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14074 | |||
|TSSclassifier=S | |||
|UniProt=Q9HBL1,Q9NZ56 | |||
|association_with_transcript=13bp_to_NM_020066,uc010pyd.1,uc010pye.1_5end | |||
|coexpression_cluster_id=C2556 | |||
|description=CAGE_peak_3_at_FMN2_5end | |||
|id=chr1:240255198..240255211,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.90e-17!180;CL:0000057!2.78e-15!75;CL:0002620!5.11e-12!23;CL:0000133!2.77e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.90e-13;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.57e-13,23;CL:0000057,3.83e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.50e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.67e-07;5!DOID:450;2.67e-07;5!DOID:66;2.67e-07;5!DOID:423;2.67e-07;5!DOID:0080000;2.67e-07;5!DOID:11722;2.67e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.33e-07,5;DOID:450,2.33e-07,5;DOID:66,2.33e-07,5;DOID:423,2.33e-07,5;DOID:0080000,2.33e-07,5;DOID:11722,2.33e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.61e-43!94;UBERON:0001016!3.61e-43!94;UBERON:0005743!2.46e-42!86;UBERON:0001017!1.99e-40!82;UBERON:0001049!3.00e-40!57;UBERON:0005068!3.00e-40!57;UBERON:0006241!3.00e-40!57;UBERON:0007135!3.00e-40!57;UBERON:0000955!3.45e-38!69;UBERON:0006238!3.45e-38!69;UBERON:0002616!2.70e-35!59;UBERON:0003075!2.24e-33!86;UBERON:0007284!2.24e-33!86;UBERON:0002780!4.63e-31!41;UBERON:0001890!4.63e-31!41;UBERON:0006240!4.63e-31!41;UBERON:0002346!1.49e-30!90;UBERON:0003080!7.26e-30!42;UBERON:0003056!5.63e-27!61;UBERON:0004121!9.99e-27!169;UBERON:0000033!3.09e-26!123;UBERON:0002020!4.21e-26!34;UBERON:0003528!4.21e-26!34;UBERON:0001893!4.93e-26!34;UBERON:0000924!3.32e-25!173;UBERON:0006601!3.32e-25!173;UBERON:0002791!3.67e-25!33;UBERON:0001869!1.59e-24!32;UBERON:0000153!1.63e-23!129;UBERON:0007811!1.63e-23!129;UBERON:0000475!2.14e-19!365;UBERON:0000956!4.71e-19!25;UBERON:0000203!4.71e-19!25;UBERON:0002619!2.01e-18!22;UBERON:0001950!8.59e-17!20;UBERON:0007023!6.04e-14!115;UBERON:0003076!2.78e-11!15;UBERON:0003057!2.78e-11!15;UBERON:0002097!8.21e-10!40;UBERON:0002199!2.10e-09!45;UBERON:0002416!2.10e-09!45;UBERON:0004733!4.73e-09!12;UBERON:0002028!4.73e-09!12;UBERON:0007277!4.73e-09!12;UBERON:0002420!1.35e-08!9;UBERON:0007245!1.35e-08!9;UBERON:0010009!1.35e-08!9;UBERON:0010011!1.35e-08!9;UBERON:0000454!1.35e-08!9;UBERON:0002308!1.70e-08!9;UBERON:0000125!1.70e-08!9;UBERON:0000483!2.35e-08!309;UBERON:0000064!4.54e-08!219;UBERON:0004732!5.21e-08!13;UBERON:0000119!5.78e-08!312;UBERON:0000025!1.19e-07!194;UBERON:0009663!8.54e-07!7 | |||
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| |||
|short_description=p3@FMN2 | |||
}} |
Revision as of 04:31, 12 September 2013
Short description: | p3@FMN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_FMN2_5end |
Coexpression cluster: | C2556_Fibroblast_corpus_medulla_gastrointestinal_occipital_temporal_cerebellum |
Association with transcript: | 13bp_to_NM_020066, uc010pyd.1, uc010pye.1_5end |
EntrezGene: | FMN2 |
HGNC: | 14074 |
UniProt: | Q9HBL1Q9NZ56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.57e-13 | 23 |
fibroblast | 3.83e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.33e-07 | 5 |
myotonic disease | 2.33e-07 | 5 |
muscle tissue disease | 2.33e-07 | 5 |
myopathy | 2.33e-07 | 5 |
muscular disease | 2.33e-07 | 5 |
myotonic dystrophy | 2.33e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.