FFCP PHASE1:Hg19::chr1:206317482..206317491,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1510|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2530|TSSclassifier=S|UniProt=|association_with_transcript=9bp_to_ENST00000360218_5end|coexpression_cluster_id=C238|description=CAGE_peak_5_at_CTSE_5end|id=chr1:206317482..206317491,+|ontology_enrichment_celltype=CL:0002322!3.25e-13!5;CL:0000148!7.48e-07!10;CL:0000541!7.48e-07!10|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006242;1.67e-23;1|ontology_enrichment_disease=DOID:3493!7.47e-16!2|ontology_enrichment_disease_v019=DOID:3493;1.65e-12;2|ontology_enrichment_disease_v019_2=DOID:3493,1.65e-12,2|ontology_enrichment_uberon=UBERON:0005409!8.80e-12!35;UBERON:0002110!1.05e-10!3;UBERON:0006242!1.05e-10!3;UBERON:0001007!9.83e-09!155;UBERON:0001555!9.83e-09!155;UBERON:0007026!9.83e-09!155;UBERON:0000945!1.12e-08!8;UBERON:0010039!1.12e-08!8;UBERON:0002336!3.53e-08!1;UBERON:0001018!3.53e-08!1;UBERON:0002473!3.53e-08!1;UBERON:0005340!3.53e-08!1;UBERON:0002316!3.53e-08!1;UBERON:0003544!3.53e-08!1;UBERON:0001020!3.53e-08!1;UBERON:0005970!3.53e-08!1;UBERON:0002437!3.53e-08!1;UBERON:0004119!9.15e-08!169;UBERON:0000925!9.15e-08!169;UBERON:0006595!9.15e-08!169;UBERON:0004921!6.10e-07!129;UBERON:0004185!6.10e-07!129|ontology_enrichment_uberon_v019=UBERON:0002108;2.11e-18;4!UBERON:0005409;1.08e-15;22!UBERON:0000160;1.36e-11;17!UBERON:0004921;2.37e-09;33!UBERON:0002110;9.66e-09;3!UBERON:0002114;1.46e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.11e-18,4;UBERON:0005409,6.10e-14,25;UBERON:0000160,1.33e-11,17;UBERON:0002110,9.66e-09,3;UBERON:0006242,9.66e-09,3;UBERON:0002114,1.40e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,5.76323085796252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69864615297857,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490751168076215,7.43699342391843,0,0,0,0,0,0,0,0,0,0,2.39239890134628,0.437119121007915,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,27.7527827533677,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.25458863311266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@CTSE}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1510 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2530 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=9bp_to_ENST00000360218_5end | |||
|coexpression_cluster_id=C238 | |||
|description=CAGE_peak_5_at_CTSE_5end | |||
|id=chr1:206317482..206317491,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.25e-13!5;CL:0000148!7.48e-07!10;CL:0000541!7.48e-07!10 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.67e-23;1 | |||
|ontology_enrichment_disease=DOID:3493!7.47e-16!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.65e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.65e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!8.80e-12!35;UBERON:0002110!1.05e-10!3;UBERON:0006242!1.05e-10!3;UBERON:0001007!9.83e-09!155;UBERON:0001555!9.83e-09!155;UBERON:0007026!9.83e-09!155;UBERON:0000945!1.12e-08!8;UBERON:0010039!1.12e-08!8;UBERON:0002336!3.53e-08!1;UBERON:0001018!3.53e-08!1;UBERON:0002473!3.53e-08!1;UBERON:0005340!3.53e-08!1;UBERON:0002316!3.53e-08!1;UBERON:0003544!3.53e-08!1;UBERON:0001020!3.53e-08!1;UBERON:0005970!3.53e-08!1;UBERON:0002437!3.53e-08!1;UBERON:0004119!9.15e-08!169;UBERON:0000925!9.15e-08!169;UBERON:0006595!9.15e-08!169;UBERON:0004921!6.10e-07!129;UBERON:0004185!6.10e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.11e-18;4!UBERON:0005409;1.08e-15;22!UBERON:0000160;1.36e-11;17!UBERON:0004921;2.37e-09;33!UBERON:0002110;9.66e-09;3!UBERON:0002114;1.46e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.11e-18,4;UBERON:0005409,6.10e-14,25;UBERON:0000160,1.33e-11,17;UBERON:0002110,9.66e-09,3;UBERON:0006242,9.66e-09,3;UBERON:0002114,1.40e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,5.76323085796252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69864615297857,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490751168076215,7.43699342391843,0,0,0,0,0,0,0,0,0,0,2.39239890134628,0.437119121007915,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,27.7527827533677,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.25458863311266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@CTSE | |||
}} |
Revision as of 03:07, 12 September 2013
Short description: | p5@CTSE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CTSE_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | 9bp_to_ENST00000360218_5end |
EntrezGene: | CTSE |
HGNC: | 2530 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 2.11e-18 | 4 |
gastrointestinal system | 6.10e-14 | 25 |
intestine | 1.33e-11 | 17 |
gallbladder | 9.66e-09 | 3 |
gall bladder primordium | 9.66e-09 | 3 |
duodenum | 1.40e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.65e-12 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.