FFCP PHASE1:Hg19::chr1:167059705..167059714,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10223|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4445|TSSclassifier=S|UniProt=E9PMB2|association_with_transcript=-142bp_to_ENST00000534512_5end|coexpression_cluster_id=C25|description=CAGE_peak_6_at_GPA33_5end|id=chr1:167059705..167059714,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0001045;1.26e-25;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000059!5.88e-45!11;UBERON:0000160!7.84e-45!27;UBERON:0001155!1.14e-35!9;UBERON:0005409!7.51e-35!35;UBERON:0001154!6.31e-21!1;UBERON:0001153!6.31e-21!1;UBERON:0004907!1.31e-16!5;UBERON:0002108!1.25e-12!14;UBERON:0004921!1.96e-09!129;UBERON:0004185!1.96e-09!129;UBERON:0001007!8.71e-08!155;UBERON:0001555!8.71e-08!155;UBERON:0007026!8.71e-08!155;UBERON:0004119!4.19e-07!169;UBERON:0000925!4.19e-07!169;UBERON:0006595!4.19e-07!169|ontology_enrichment_uberon_v019=UBERON:0000160;6.51e-67;17!UBERON:0005409;1.88e-52;22!UBERON:0002108;4.68e-45;4!UBERON:0001155;3.36e-44;9!UBERON:0000059;2.70e-36;11!UBERON:0004921;4.84e-32;33!UBERON:0001154;1.26e-25;1!UBERON:0001153;1.26e-25;1!UBERON:0009854;1.26e-25;1!UBERON:0001555;3.21e-13;54!UBERON:0002114;1.60e-09;2!UBERON:0001007;9.23e-09;81!UBERON:0009856;2.04e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.84e-67,17;UBERON:0005409,2.00e-46,25;UBERON:0002108,5.45e-45,4;UBERON:0001155,3.18e-44,9;UBERON:0000059,2.58e-36,11;UBERON:0001154,1.26e-25,1;UBERON:0001153,1.26e-25,1;UBERON:0001045,1.26e-25,1;UBERON:0004921,3.14e-10,118;UBERON:0002114,1.67e-09,2;UBERON:0001007,2.52e-08,145;UBERON:0001555,2.52e-08,145;UBERON:0007026,2.52e-08,145;UBERON:0004119,1.54e-07,160;UBERON:0000925,1.54e-07,160;UBERON:0006595,1.54e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8071081061233,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,4.59979335417364,8.55442202907076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2739551945665,3.27839340755936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@GPA33}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10223 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4445 | |||
|TSSclassifier=S | |||
|UniProt=E9PMB2 | |||
|association_with_transcript=-142bp_to_ENST00000534512_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_6_at_GPA33_5end | |||
|id=chr1:167059705..167059714,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.26e-25;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!5.88e-45!11;UBERON:0000160!7.84e-45!27;UBERON:0001155!1.14e-35!9;UBERON:0005409!7.51e-35!35;UBERON:0001154!6.31e-21!1;UBERON:0001153!6.31e-21!1;UBERON:0004907!1.31e-16!5;UBERON:0002108!1.25e-12!14;UBERON:0004921!1.96e-09!129;UBERON:0004185!1.96e-09!129;UBERON:0001007!8.71e-08!155;UBERON:0001555!8.71e-08!155;UBERON:0007026!8.71e-08!155;UBERON:0004119!4.19e-07!169;UBERON:0000925!4.19e-07!169;UBERON:0006595!4.19e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;6.51e-67;17!UBERON:0005409;1.88e-52;22!UBERON:0002108;4.68e-45;4!UBERON:0001155;3.36e-44;9!UBERON:0000059;2.70e-36;11!UBERON:0004921;4.84e-32;33!UBERON:0001154;1.26e-25;1!UBERON:0001153;1.26e-25;1!UBERON:0009854;1.26e-25;1!UBERON:0001555;3.21e-13;54!UBERON:0002114;1.60e-09;2!UBERON:0001007;9.23e-09;81!UBERON:0009856;2.04e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.84e-67,17;UBERON:0005409,2.00e-46,25;UBERON:0002108,5.45e-45,4;UBERON:0001155,3.18e-44,9;UBERON:0000059,2.58e-36,11;UBERON:0001154,1.26e-25,1;UBERON:0001153,1.26e-25,1;UBERON:0001045,1.26e-25,1;UBERON:0004921,3.14e-10,118;UBERON:0002114,1.67e-09,2;UBERON:0001007,2.52e-08,145;UBERON:0001555,2.52e-08,145;UBERON:0007026,2.52e-08,145;UBERON:0004119,1.54e-07,160;UBERON:0000925,1.54e-07,160;UBERON:0006595,1.54e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8071081061233,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,4.59979335417364,8.55442202907076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2739551945665,3.27839340755936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@GPA33 | |||
}} |
Revision as of 01:34, 12 September 2013
Short description: | p6@GPA33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_GPA33_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -142bp_to_ENST00000534512_5end |
EntrezGene: | GPA33 |
HGNC: | 4445 |
UniProt: | E9PMB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 6.84e-67 | 17 |
gastrointestinal system | 2.00e-46 | 25 |
small intestine | 5.45e-45 | 4 |
colon | 3.18e-44 | 9 |
large intestine | 2.58e-36 | 11 |
vermiform appendix | 1.26e-25 | 1 |
caecum | 1.26e-25 | 1 |
midgut | 1.26e-25 | 1 |
subdivision of digestive tract | 3.14e-10 | 118 |
duodenum | 1.67e-09 | 2 |
digestive system | 2.52e-08 | 145 |
digestive tract | 2.52e-08 | 145 |
primitive gut | 2.52e-08 | 145 |
endoderm-derived structure | 1.54e-07 | 160 |
endoderm | 1.54e-07 | 160 |
presumptive endoderm | 1.54e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.