FFCP PHASE1:Hg19::chr1:100643734..100643745,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=127495|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28228|TSSclassifier=S|UniProt=Q96DD0|association_with_transcript=25bp_to_ENST00000342895,ENST00000370136,ENST00000370137,ENST00000370138,NM_144620,uc001dsw.1,uc001dsx.1_5end|coexpression_cluster_id=C31|description=CAGE_peak_2_at_LRRC39_5end|id=chr1:100643734..100643745,-|ontology_enrichment_celltype=CL:0000148!4.55e-08!10;CL:0000541!4.55e-08!10|ontology_enrichment_celltype_v019=CL:0002566;9.17e-09;1|ontology_enrichment_celltype_v019_2=CL:0002566,8.49e-09,1|ontology_enrichment_development_v019=UBERON:0004874;2.60e-09;1!UBERON:0010227;3.18e-09;1!UBERON:0004140;3.72e-09;1!UBERON:0000358;5.31e-09;1!UBERON:0010226;9.17e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.73e-38!115;UBERON:0002780!2.95e-15!41;UBERON:0001890!2.95e-15!41;UBERON:0006240!2.95e-15!41;UBERON:0003080!8.73e-15!42;UBERON:0003075!1.23e-13!86;UBERON:0007284!1.23e-13!86;UBERON:0001049!1.51e-13!57;UBERON:0005068!1.51e-13!57;UBERON:0006241!1.51e-13!57;UBERON:0007135!1.51e-13!57;UBERON:0001950!2.70e-13!20;UBERON:0002346!1.03e-12!90;UBERON:0000153!1.40e-12!129;UBERON:0007811!1.40e-12!129;UBERON:0002619!6.74e-12!22;UBERON:0002616!1.56e-11!59;UBERON:0003056!3.14e-11!61;UBERON:0001893!3.81e-11!34;UBERON:0005743!6.00e-11!86;UBERON:0001017!1.22e-10!82;UBERON:0001869!1.80e-10!32;UBERON:0000956!3.29e-10!25;UBERON:0000203!3.29e-10!25;UBERON:0000955!5.30e-10!69;UBERON:0006238!5.30e-10!69;UBERON:0002791!6.32e-10!33;UBERON:0000200!1.39e-09!6;UBERON:0000073!2.46e-09!94;UBERON:0001016!2.46e-09!94;UBERON:0004121!3.29e-09!169;UBERON:0000033!5.81e-09!123;UBERON:0000924!8.49e-09!173;UBERON:0006601!8.49e-09!173;UBERON:0004151!1.29e-08!3;UBERON:0003978!1.70e-08!3;UBERON:0009751!1.70e-08!3;UBERON:0000946!1.70e-08!3;UBERON:0002523!1.70e-08!3;UBERON:0005983!1.70e-08!3;UBERON:0002165!1.70e-08!3;UBERON:0002062!1.70e-08!3;UBERON:0007280!1.70e-08!3;UBERON:0002020!3.23e-08!34;UBERON:0003528!3.23e-08!34;UBERON:0001042!4.43e-08!10;UBERON:0009145!4.43e-08!10;UBERON:0002771!1.04e-07!3;UBERON:0006562!2.82e-07!11;UBERON:0001871!2.98e-07!7|ontology_enrichment_uberon_v019=UBERON:0005090;4.91e-17;2!UBERON:0001630;4.91e-17;2!UBERON:0000341;6.48e-17;2!UBERON:0001905;2.77e-16;2!UBERON:0002757;2.77e-16;2!UBERON:0010134;2.77e-16;2!UBERON:0005408;2.77e-16;2!UBERON:0001899;2.77e-16;2!UBERON:0001134;2.89e-12;16!UBERON:0002036;2.89e-12;16!UBERON:0001723;1.27e-11;3!UBERON:0001033;1.27e-11;3!UBERON:0004151;3.70e-11;3!UBERON:0002426;1.89e-09;1!UBERON:0003831;1.89e-09;1!UBERON:0003898;1.89e-09;1!UBERON:0004830;1.89e-09;1!UBERON:0003830;1.89e-09;1!UBERON:0005175;1.89e-09;1!UBERON:0001774;1.89e-09;1!UBERON:0001103;1.89e-09;1!UBERON:0000989;2.60e-09;1!UBERON:0001389;2.60e-09;1!UBERON:0000026;2.60e-09;1!UBERON:0008784;2.60e-09;1!UBERON:0006058;2.60e-09;1!UBERON:0008811;2.60e-09;1!UBERON:0003663;2.60e-09;1!UBERON:0004256;2.60e-09;1!UBERON:0004708;2.60e-09;1!UBERON:0002101;2.60e-09;1!UBERON:0004709;2.60e-09;1!UBERON:0002529;2.60e-09;1!UBERON:0010538;2.60e-09;1!UBERON:0003661;2.60e-09;1!UBERON:0010890;2.60e-09;1!UBERON:0002471;2.60e-09;1!UBERON:0001383;2.60e-09;1!UBERON:0010758;2.60e-09;1!UBERON:0010707;2.60e-09;1!UBERON:0000978;2.60e-09;1!UBERON:0002103;2.60e-09;1!UBERON:0001665;2.60e-09;1!UBERON:0003823;2.60e-09;1!UBERON:0000154;2.60e-09;1!UBERON:0010709;2.60e-09;1!UBERON:0002079;3.18e-09;1!UBERON:0007029;5.31e-09;1!UBERON:0002146;5.31e-09;1!UBERON:0005623;5.31e-09;1!UBERON:0002084;9.17e-09;1!UBERON:0002082;9.17e-09;1!UBERON:0003296;1.35e-08;4!UBERON:0010133;1.35e-08;4!UBERON:0002784;1.35e-08;4!UBERON:0007100;1.60e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0005090,5.32e-17,2;UBERON:0001630,5.32e-17,2;UBERON:0000341,6.75e-17,2;UBERON:0001905,2.56e-16,2;UBERON:0002757,2.56e-16,2;UBERON:0010134,2.56e-16,2;UBERON:0005408,2.56e-16,2;UBERON:0001899,2.56e-16,2;UBERON:0001723,1.27e-11,3;UBERON:0001033,1.27e-11,3;UBERON:0010056,1.27e-11,3;UBERON:0004151,3.25e-11,3;UBERON:0002426,1.89e-09,1;UBERON:0003831,1.89e-09,1;UBERON:0003898,1.89e-09,1;UBERON:0004830,1.89e-09,1;UBERON:0003830,1.89e-09,1;UBERON:0005175,1.89e-09,1;UBERON:0001774,1.89e-09,1;UBERON:0001103,1.89e-09,1;UBERON:0010084,1.89e-09,1;UBERON:0000989,2.40e-09,1;UBERON:0008811,2.40e-09,1;UBERON:0006258,2.40e-09,1;UBERON:0005876,2.40e-09,1;UBERON:0004874,2.40e-09,1;UBERON:0005418,2.82e-09,1;UBERON:0001389,2.82e-09,1;UBERON:0000026,2.82e-09,1;UBERON:0008784,2.82e-09,1;UBERON:0006058,2.82e-09,1;UBERON:0003663,2.82e-09,1;UBERON:0004256,2.82e-09,1;UBERON:0004708,2.82e-09,1;UBERON:0002101,2.82e-09,1;UBERON:0004709,2.82e-09,1;UBERON:0002529,2.82e-09,1;UBERON:0010538,2.82e-09,1;UBERON:0003661,2.82e-09,1;UBERON:0010890,2.82e-09,1;UBERON:0002471,2.82e-09,1;UBERON:0001383,2.82e-09,1;UBERON:0004357,2.82e-09,1;UBERON:0004347,2.82e-09,1;UBERON:0005420,2.82e-09,1;UBERON:0005732,2.82e-09,1;UBERON:0010758,2.82e-09,1;UBERON:0010707,2.82e-09,1;UBERON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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=127495 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28228 | |||
|TSSclassifier=S | |||
|UniProt=Q96DD0 | |||
|association_with_transcript=25bp_to_ENST00000342895,ENST00000370136,ENST00000370137,ENST00000370138,NM_144620,uc001dsw.1,uc001dsx.1_5end | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_2_at_LRRC39_5end | |||
|id=chr1:100643734..100643745,- | |||
|ontology_enrichment_celltype=CL:0000148!4.55e-08!10;CL:0000541!4.55e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0002566;9.17e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,8.49e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.60e-09;1!UBERON:0010227;3.18e-09;1!UBERON:0004140;3.72e-09;1!UBERON:0000358;5.31e-09;1!UBERON:0010226;9.17e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@LRRC39 | |||
}} |
Revision as of 23:08, 11 September 2013
Short description: | p2@LRRC39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LRRC39_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 25bp_to_ENST00000342895, ENST00000370136, ENST00000370137, ENST00000370138, NM_144620, uc001dsw.1, uc001dsx.1_5end |
EntrezGene: | LRRC39 |
HGNC: | 28228 |
UniProt: | Q96DD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 8.49e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.