FFCP PHASE1:Hg19::chr19:42007124..42007140,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2092|description=CAGE_peak_at_chr19:42007124..42007140,-|id=chr19:42007124..42007140,-|ontology_enrichment_celltype=CL:0002139!2.85e-17!24;CL:0000115!2.26e-15!35;CL:0002078!1.50e-11!44;CL:0000071!7.00e-11!18;CL:0002546!7.00e-11!18;CL:0005020!1.58e-08!6;CL:0002138!1.58e-08!6;CL:0005022!1.58e-08!6;CL:0000213!4.61e-07!57;CL:0000215!4.61e-07!57|ontology_enrichment_celltype_v019=CL:0002139;3.35e-34;24!CL:0000115;1.82e-30;36!CL:0002138;2.13e-19;6!CL:0002078;4.76e-19;45!CL:0000071;8.60e-19;18!CL:0000213;6.45e-12;58!CL:0000215;6.45e-12;58!CL:0002144;5.19e-11;3!CL:0002188;7.31e-11;5!CL:0002543;4.26e-08;6!CL:1000746;9.71e-08;7!CL:1000612;9.71e-08;7!CL:0002545;1.09e-07;2|ontology_enrichment_celltype_v019_2=CL:0000115,3.23e-37,36;CL:0002139,3.72e-34,24;CL:0002078,1.57e-28,45;CL:0000213,9.05e-21,58;CL:0000215,9.05e-21,58;CL:0005020,1.95e-19,6;CL:0002138,1.95e-19,6;CL:0005022,1.95e-19,6;CL:0000071,9.86e-19,18;CL:0002546,9.86e-19,18;CL:0002144,5.28e-11,3;CL:0002188,7.24e-11,5;CL:0002543,4.83e-08,6;CL:1000746,9.64e-08,7;CL:1000612,9.64e-08,7;CL:0002545,1.09e-07,2;CL:0000222,4.61e-07,121|ontology_enrichment_development_v019=CL:0005022;2.13e-19;6!CL:0002546;8.60e-19;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.98e-26!115;UBERON:0004111!2.28e-16!241;UBERON:0000477!4.42e-14!286;UBERON:0000025!1.95e-13!194;UBERON:0001049!6.08e-13!57;UBERON:0005068!6.08e-13!57;UBERON:0006241!6.08e-13!57;UBERON:0007135!6.08e-13!57;UBERON:0001986!7.00e-11!18;UBERON:0004638!7.00e-11!18;UBERON:0004852!7.00e-11!18;UBERON:0000487!7.57e-11!22;UBERON:0001893!5.88e-10!34;UBERON:0003075!7.52e-10!86;UBERON:0007284!7.52e-10!86;UBERON:0002780!8.02e-10!41;UBERON:0001890!8.02e-10!41;UBERON:0006240!8.02e-10!41;UBERON:0001017!1.18e-09!82;UBERON:0002791!1.45e-09!33;UBERON:0002346!1.48e-09!90;UBERON:0002616!1.69e-09!59;UBERON:0003080!2.04e-09!42;UBERON:0002020!2.08e-09!34;UBERON:0003528!2.08e-09!34;UBERON:0005743!3.08e-09!86;UBERON:0001869!5.57e-09!32;UBERON:0006914!6.60e-09!25;UBERON:0000073!1.37e-08!94;UBERON:0001016!1.37e-08!94;UBERON:0000955!2.87e-08!69;UBERON:0006238!2.87e-08!69;UBERON:0002619!4.02e-08!22;UBERON:0000483!4.89e-08!309;UBERON:0000119!9.79e-08!312;UBERON:0002465!1.68e-07!10;UBERON:0001950!8.61e-07!20|ontology_enrichment_uberon_v019=UBERON:0004638;8.60e-19;18!UBERON:0001986;8.60e-19;18!UBERON:0004852;8.60e-19;18!UBERON:0000487;6.07e-18;22!UBERON:0006914;1.90e-15;25!UBERON:0002465;6.79e-15;10!UBERON:0001473;2.38e-14;8!UBERON:0004536;2.38e-14;8!UBERON:0006558;2.38e-14;8!UBERON:0010523;5.19e-11;3!UBERON:0001915;5.19e-11;3!UBERON:0001982;5.19e-11;3!UBERON:0000490;7.84e-10;33!UBERON:0000055;1.31e-09;65!UBERON:0001638;6.29e-08;9!UBERON:0003920;6.29e-08;9!UBERON:0004582;6.29e-08;9!UBERON:0002405;7.08e-08;27!UBERON:0000074;9.71e-08;7!UBERON:0001229;9.71e-08;7!UBERON:0005800;1.09e-07;2!UBERON:0001515;1.09e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0004638,9.86e-19,18;UBERON:0001986,9.86e-19,18;UBERON:0004852,9.86e-19,18;UBERON:0000487,6.86e-18,22;UBERON:0006914,2.12e-15,25;UBERON:0002465,6.33e-15,10;UBERON:0001473,2.23e-14,8;UBERON:0004536,2.23e-14,8;UBERON:0006558,2.23e-14,8;UBERON:0000055,2.79e-13,68;UBERON:0010523,5.28e-11,3;UBERON:0001915,5.28e-11,3;UBERON:0001982,5.28e-11,3;UBERON:0002049,1.22e-09,78;UBERON:0007798,1.22e-09,78;UBERON:0003887,4.12e-09,12;UBERON:0004111,3.40e-08,240;UBERON:0001638,7.46e-08,9;UBERON:0003920,7.46e-08,9;UBERON:0004582,7.46e-08,9;UBERON:0010532,9.64e-08,7;UBERON:0000074,9.64e-08,7;UBERON:0001229,9.64e-08,7;UBERON:0001230,9.64e-08,7;UBERON:0003220,9.64e-08,7;UBERON:0005749,9.64e-08,7;UBERON:0004199,9.64e-08,7;UBERON:0004209,9.64e-08,7;UBERON:0004198,9.64e-08,7;UBERON:0005800,1.09e-07,2;UBERON:0001515,1.09e-07,2;UBERON:0004876,3.53e-07,11;UBERON:0005103,9.18e-07,8;UBERON:0000083,9.18e-07,8;UBERON:0009201,9.18e-07,8;UBERON:0006553,9.18e-07,8;UBERON:0003074,9.18e-07,8;UBERON:0003060,9.18e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,1.6507082516404,2.08994966536811,3.87625138753993,4.98072767761394,9.70689777017544,51.5621525899708,42.5752379202367,23.4299575246243,22.7951109814439,13.7724131139899,2.67899184852239,1.34717623575702,0.900891843866578,3.06633274931766,0,2.01521918323448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0,0.2323878857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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2092 | |||
|description=CAGE_peak_at_chr19:42007124..42007140,- | |||
|id=chr19:42007124..42007140,- | |||
|ontology_enrichment_celltype=CL:0002139!2.85e-17!24;CL:0000115!2.26e-15!35;CL:0002078!1.50e-11!44;CL:0000071!7.00e-11!18;CL:0002546!7.00e-11!18;CL:0005020!1.58e-08!6;CL:0002138!1.58e-08!6;CL:0005022!1.58e-08!6;CL:0000213!4.61e-07!57;CL:0000215!4.61e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.35e-34;24!CL:0000115;1.82e-30;36!CL:0002138;2.13e-19;6!CL:0002078;4.76e-19;45!CL:0000071;8.60e-19;18!CL:0000213;6.45e-12;58!CL:0000215;6.45e-12;58!CL:0002144;5.19e-11;3!CL:0002188;7.31e-11;5!CL:0002543;4.26e-08;6!CL:1000746;9.71e-08;7!CL:1000612;9.71e-08;7!CL:0002545;1.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.23e-37,36;CL:0002139,3.72e-34,24;CL:0002078,1.57e-28,45;CL:0000213,9.05e-21,58;CL:0000215,9.05e-21,58;CL:0005020,1.95e-19,6;CL:0002138,1.95e-19,6;CL:0005022,1.95e-19,6;CL:0000071,9.86e-19,18;CL:0002546,9.86e-19,18;CL:0002144,5.28e-11,3;CL:0002188,7.24e-11,5;CL:0002543,4.83e-08,6;CL:1000746,9.64e-08,7;CL:1000612,9.64e-08,7;CL:0002545,1.09e-07,2;CL:0000222,4.61e-07,121 | |||
|ontology_enrichment_development_v019=CL:0005022;2.13e-19;6!CL:0002546;8.60e-19;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.98e-26!115;UBERON:0004111!2.28e-16!241;UBERON:0000477!4.42e-14!286;UBERON:0000025!1.95e-13!194;UBERON:0001049!6.08e-13!57;UBERON:0005068!6.08e-13!57;UBERON:0006241!6.08e-13!57;UBERON:0007135!6.08e-13!57;UBERON:0001986!7.00e-11!18;UBERON:0004638!7.00e-11!18;UBERON:0004852!7.00e-11!18;UBERON:0000487!7.57e-11!22;UBERON:0001893!5.88e-10!34;UBERON:0003075!7.52e-10!86;UBERON:0007284!7.52e-10!86;UBERON:0002780!8.02e-10!41;UBERON:0001890!8.02e-10!41;UBERON:0006240!8.02e-10!41;UBERON:0001017!1.18e-09!82;UBERON:0002791!1.45e-09!33;UBERON:0002346!1.48e-09!90;UBERON:0002616!1.69e-09!59;UBERON:0003080!2.04e-09!42;UBERON:0002020!2.08e-09!34;UBERON:0003528!2.08e-09!34;UBERON:0005743!3.08e-09!86;UBERON:0001869!5.57e-09!32;UBERON:0006914!6.60e-09!25;UBERON:0000073!1.37e-08!94;UBERON:0001016!1.37e-08!94;UBERON:0000955!2.87e-08!69;UBERON:0006238!2.87e-08!69;UBERON:0002619!4.02e-08!22;UBERON:0000483!4.89e-08!309;UBERON:0000119!9.79e-08!312;UBERON:0002465!1.68e-07!10;UBERON:0001950!8.61e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.60e-19;18!UBERON:0001986;8.60e-19;18!UBERON:0004852;8.60e-19;18!UBERON:0000487;6.07e-18;22!UBERON:0006914;1.90e-15;25!UBERON:0002465;6.79e-15;10!UBERON:0001473;2.38e-14;8!UBERON:0004536;2.38e-14;8!UBERON:0006558;2.38e-14;8!UBERON:0010523;5.19e-11;3!UBERON:0001915;5.19e-11;3!UBERON:0001982;5.19e-11;3!UBERON:0000490;7.84e-10;33!UBERON:0000055;1.31e-09;65!UBERON:0001638;6.29e-08;9!UBERON:0003920;6.29e-08;9!UBERON:0004582;6.29e-08;9!UBERON:0002405;7.08e-08;27!UBERON:0000074;9.71e-08;7!UBERON:0001229;9.71e-08;7!UBERON:0005800;1.09e-07;2!UBERON:0001515;1.09e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,9.86e-19,18;UBERON:0001986,9.86e-19,18;UBERON:0004852,9.86e-19,18;UBERON:0000487,6.86e-18,22;UBERON:0006914,2.12e-15,25;UBERON:0002465,6.33e-15,10;UBERON:0001473,2.23e-14,8;UBERON:0004536,2.23e-14,8;UBERON:0006558,2.23e-14,8;UBERON:0000055,2.79e-13,68;UBERON:0010523,5.28e-11,3;UBERON:0001915,5.28e-11,3;UBERON:0001982,5.28e-11,3;UBERON:0002049,1.22e-09,78;UBERON:0007798,1.22e-09,78;UBERON:0003887,4.12e-09,12;UBERON:0004111,3.40e-08,240;UBERON:0001638,7.46e-08,9;UBERON:0003920,7.46e-08,9;UBERON:0004582,7.46e-08,9;UBERON:0010532,9.64e-08,7;UBERON:0000074,9.64e-08,7;UBERON:0001229,9.64e-08,7;UBERON:0001230,9.64e-08,7;UBERON:0003220,9.64e-08,7;UBERON:0005749,9.64e-08,7;UBERON:0004199,9.64e-08,7;UBERON:0004209,9.64e-08,7;UBERON:0004198,9.64e-08,7;UBERON:0005800,1.09e-07,2;UBERON:0001515,1.09e-07,2;UBERON:0004876,3.53e-07,11;UBERON:0005103,9.18e-07,8;UBERON:0000083,9.18e-07,8;UBERON:0009201,9.18e-07,8;UBERON:0006553,9.18e-07,8;UBERON:0003074,9.18e-07,8;UBERON:0003060,9.18e-07,8 | |||
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| |||
|short_description=p@chr19:42007124..42007140,- | |||
}} |
Revision as of 20:49, 11 September 2013
Short description: | p@chr19:42007124..42007140, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:42007124..42007140, - |
Coexpression cluster: | C2092_splenic_Endothelial_Lymphatic_adenocarcinoma_Renal_small_lymphangiectasia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.23e-37 | 36 |
endothelial cell of vascular tree | 3.72e-34 | 24 |
meso-epithelial cell | 1.57e-28 | 45 |
lining cell | 9.05e-21 | 58 |
barrier cell | 9.05e-21 | 58 |
lymphangioblast | 1.95e-19 | 6 |
endothelial cell of lymphatic vessel | 1.95e-19 | 6 |
vascular lymphangioblast | 1.95e-19 | 6 |
blood vessel endothelial cell | 9.86e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.86e-19 | 18 |
capillary endothelial cell | 5.28e-11 | 3 |
glomerular endothelial cell | 7.24e-11 | 5 |
vein endothelial cell | 4.83e-08 | 6 |
glomerular cell | 9.64e-08 | 7 |
kidney corpuscule cell | 9.64e-08 | 7 |
thoracic aorta endothelial cell | 1.09e-07 | 2 |
mesodermal cell | 4.61e-07 | 121 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.