FFCP PHASE1:Hg19::chr19:35532612..35532676,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3249|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5155|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_uc002nxs.1_5end|coexpression_cluster_id=C5|description=CAGE_peak_1_at_HPN_5end|id=chr19:35532612..35532676,+|ontology_enrichment_celltype=CL:0000039!2.93e-08!7;CL:0000586!2.93e-08!7;CL:0002322!3.64e-07!5;CL:0000181!9.71e-07!12;CL:0000417!9.71e-07!12;CL:0000668!9.71e-07!12;CL:0000414!9.71e-07!12;CL:0000412!9.71e-07!12;CL:0000182!9.71e-07!12|ontology_enrichment_celltype_v019=CL:0000039;2.80e-12;7!CL:0000586;2.80e-12;7!CL:0000182;1.01e-10;12!CL:0002322;1.81e-10;5|ontology_enrichment_celltype_v019_2=CL:0000039,3.33e-12,7;CL:0000586,3.33e-12,7;CL:0000182,1.02e-10,12;CL:0002322,1.80e-10,5|ontology_enrichment_development_v019=UBERON:0003104;1.56e-14;31!UBERON:0004161;1.86e-11;11!UBERON:0009497;2.01e-09;13!UBERON:0001041;9.26e-09;30|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!3.90e-11!126;UBERON:0007023!3.99e-11!115;UBERON:0005172!6.28e-11!55;UBERON:0005173!6.28e-11!55;UBERON:0003135!6.94e-10!11;UBERON:0005177!4.25e-09!107;UBERON:0002417!5.48e-09!61;UBERON:0000916!5.48e-09!61;UBERON:0002530!7.87e-09!59;UBERON:0001007!1.21e-08!155;UBERON:0001555!1.21e-08!155;UBERON:0007026!1.21e-08!155;UBERON:0009569!1.49e-08!113;UBERON:0004921!1.75e-08!129;UBERON:0004185!1.75e-08!129;UBERON:0009497!3.17e-08!25;UBERON:0000015!3.17e-08!25;UBERON:0002423!3.17e-08!25;UBERON:0006235!3.17e-08!25;UBERON:0004161!3.17e-08!25;UBERON:0003929!3.84e-08!54;UBERON:0002107!3.97e-08!19;UBERON:0006925!3.97e-08!19;UBERON:0008836!3.97e-08!19;UBERON:0004119!4.42e-08!169;UBERON:0000925!4.42e-08!169;UBERON:0006595!4.42e-08!169;UBERON:0000077!5.42e-08!130;UBERON:0002365!5.89e-08!31;UBERON:0002330!5.89e-08!31;UBERON:0003101!8.96e-08!22;UBERON:0000079!8.96e-08!22;UBERON:0005911!1.42e-07!82;UBERON:0002368!1.55e-07!35;UBERON:0005057!1.59e-07!26;UBERON:0000062!1.71e-07!511;UBERON:0007499!1.71e-07!25;UBERON:0001048!3.52e-07!168;UBERON:0009856!4.83e-07!26;UBERON:0000473!6.29e-07!8;UBERON:0000464!7.72e-07!104|ontology_enrichment_uberon_v019=UBERON:0002107;1.06e-11;19!UBERON:0006925;1.06e-11;19!UBERON:0002365;3.14e-11;31!UBERON:0002330;3.14e-11;31!UBERON:0002368;7.94e-11;33!UBERON:0000922;8.91e-11;49!UBERON:0003135;2.93e-10;11!UBERON:0002423;9.21e-10;25!UBERON:0005172;2.39e-08;52!UBERON:0005173;2.39e-08;52!UBERON:0000473;4.29e-08;8!UBERON:0006947;3.75e-07;3!UBERON:0004054;3.75e-07;3!UBERON:0002530;4.30e-07;57!UBERON:0003101;4.78e-07;22!UBERON:0000079;4.78e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0005172,7.48e-15,54;UBERON:0005173,7.48e-15,54;UBERON:0005177,4.84e-13,101;UBERON:0002417,1.10e-12,60;UBERON:0000916,1.10e-12,60;UBERON:0002530,6.65e-12,59;UBERON:0002107,1.04e-11,19;UBERON:0006925,1.04e-11,19;UBERON:0008836,1.04e-11,19;UBERON:0009569,1.52e-11,112;UBERON:0007499,2.01e-11,25;UBERON:0002365,2.21e-11,31;UBERON:0002330,2.21e-11,31;UBERON:0002368,3.07e-11,35;UBERON:0009856,7.54e-11,26;UBERON:0003135,3.20e-10,11;UBERON:0004921,4.49e-10,118;UBERON:0009497,9.10e-10,25;UBERON:0000015,9.10e-10,25;UBERON:0002423,9.10e-10,25;UBERON:0006235,9.10e-10,25;UBERON:0004161,9.10e-10,25;UBERON:0008835,1.01e-09,22;UBERON:0003894,1.01e-09,22;UBERON:0001007,2.84e-09,145;UBERON:0001555,2.84e-09,145;UBERON:0007026,2.84e-09,145;UBERON:0009854,3.54e-09,23;UBERON:0000949,4.53e-09,45;UBERON:0005911,7.99e-09,82;UBERON:0004119,3.98e-08,160;UBERON:0000925,3.98e-08,160;UBERON:0006595,3.98e-08,160;UBERON:0000473,4.71e-08,8;UBERON:0003929,5.89e-08,54;UBERON:0001041,1.47e-07,87;UBERON:0001048,3.70e-07,160;UBERON:0006947,3.76e-07,3;UBERON:0004054,3.76e-07,3;UBERON:0003101,4.97e-07,22;UBERON:0000079,4.97e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,3.68600904752263,10.4670175195864,0.436882744260345,1.84636884759917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.8824749753495,3.64295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,26.7122416423814,19.2168164066154,20.5663278879048,13.2686150419674,21.9519140261797,11.6792754904266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8810180793198,0,812.499773207936,528.761042572563,527.575386666494,0,31.6080287055802,0,1.09750285408626,0,0,4.9997760385606,0,0,0,0.115930404975077,0,0,0,0,3.95102198979638,1.71697232418975,0,0,0,0,1.00789276919316,2.1266264586358,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3249 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5155 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002nxs.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_HPN_5end | |||
|id=chr19:35532612..35532676,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.93e-08!7;CL:0000586!2.93e-08!7;CL:0002322!3.64e-07!5;CL:0000181!9.71e-07!12;CL:0000417!9.71e-07!12;CL:0000668!9.71e-07!12;CL:0000414!9.71e-07!12;CL:0000412!9.71e-07!12;CL:0000182!9.71e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.80e-12;7!CL:0000586;2.80e-12;7!CL:0000182;1.01e-10;12!CL:0002322;1.81e-10;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.33e-12,7;CL:0000586,3.33e-12,7;CL:0000182,1.02e-10,12;CL:0002322,1.80e-10,5 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.56e-14;31!UBERON:0004161;1.86e-11;11!UBERON:0009497;2.01e-09;13!UBERON:0001041;9.26e-09;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!3.90e-11!126;UBERON:0007023!3.99e-11!115;UBERON:0005172!6.28e-11!55;UBERON:0005173!6.28e-11!55;UBERON:0003135!6.94e-10!11;UBERON:0005177!4.25e-09!107;UBERON:0002417!5.48e-09!61;UBERON:0000916!5.48e-09!61;UBERON:0002530!7.87e-09!59;UBERON:0001007!1.21e-08!155;UBERON:0001555!1.21e-08!155;UBERON:0007026!1.21e-08!155;UBERON:0009569!1.49e-08!113;UBERON:0004921!1.75e-08!129;UBERON:0004185!1.75e-08!129;UBERON:0009497!3.17e-08!25;UBERON:0000015!3.17e-08!25;UBERON:0002423!3.17e-08!25;UBERON:0006235!3.17e-08!25;UBERON:0004161!3.17e-08!25;UBERON:0003929!3.84e-08!54;UBERON:0002107!3.97e-08!19;UBERON:0006925!3.97e-08!19;UBERON:0008836!3.97e-08!19;UBERON:0004119!4.42e-08!169;UBERON:0000925!4.42e-08!169;UBERON:0006595!4.42e-08!169;UBERON:0000077!5.42e-08!130;UBERON:0002365!5.89e-08!31;UBERON:0002330!5.89e-08!31;UBERON:0003101!8.96e-08!22;UBERON:0000079!8.96e-08!22;UBERON:0005911!1.42e-07!82;UBERON:0002368!1.55e-07!35;UBERON:0005057!1.59e-07!26;UBERON:0000062!1.71e-07!511;UBERON:0007499!1.71e-07!25;UBERON:0001048!3.52e-07!168;UBERON:0009856!4.83e-07!26;UBERON:0000473!6.29e-07!8;UBERON:0000464!7.72e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.06e-11;19!UBERON:0006925;1.06e-11;19!UBERON:0002365;3.14e-11;31!UBERON:0002330;3.14e-11;31!UBERON:0002368;7.94e-11;33!UBERON:0000922;8.91e-11;49!UBERON:0003135;2.93e-10;11!UBERON:0002423;9.21e-10;25!UBERON:0005172;2.39e-08;52!UBERON:0005173;2.39e-08;52!UBERON:0000473;4.29e-08;8!UBERON:0006947;3.75e-07;3!UBERON:0004054;3.75e-07;3!UBERON:0002530;4.30e-07;57!UBERON:0003101;4.78e-07;22!UBERON:0000079;4.78e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,7.48e-15,54;UBERON:0005173,7.48e-15,54;UBERON:0005177,4.84e-13,101;UBERON:0002417,1.10e-12,60;UBERON:0000916,1.10e-12,60;UBERON:0002530,6.65e-12,59;UBERON:0002107,1.04e-11,19;UBERON:0006925,1.04e-11,19;UBERON:0008836,1.04e-11,19;UBERON:0009569,1.52e-11,112;UBERON:0007499,2.01e-11,25;UBERON:0002365,2.21e-11,31;UBERON:0002330,2.21e-11,31;UBERON:0002368,3.07e-11,35;UBERON:0009856,7.54e-11,26;UBERON:0003135,3.20e-10,11;UBERON:0004921,4.49e-10,118;UBERON:0009497,9.10e-10,25;UBERON:0000015,9.10e-10,25;UBERON:0002423,9.10e-10,25;UBERON:0006235,9.10e-10,25;UBERON:0004161,9.10e-10,25;UBERON:0008835,1.01e-09,22;UBERON:0003894,1.01e-09,22;UBERON:0001007,2.84e-09,145;UBERON:0001555,2.84e-09,145;UBERON:0007026,2.84e-09,145;UBERON:0009854,3.54e-09,23;UBERON:0000949,4.53e-09,45;UBERON:0005911,7.99e-09,82;UBERON:0004119,3.98e-08,160;UBERON:0000925,3.98e-08,160;UBERON:0006595,3.98e-08,160;UBERON:0000473,4.71e-08,8;UBERON:0003929,5.89e-08,54;UBERON:0001041,1.47e-07,87;UBERON:0001048,3.70e-07,160;UBERON:0006947,3.76e-07,3;UBERON:0004054,3.76e-07,3;UBERON:0003101,4.97e-07,22;UBERON:0000079,4.97e-07,22 | |||
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|short_description=p1@HPN | |||
}} |
Revision as of 20:04, 11 September 2013
Short description: | p1@HPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_HPN_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_uc002nxs.1_5end |
EntrezGene: | HPN |
HGNC: | 5155 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.33e-12 | 7 |
germ cell | 3.33e-12 | 7 |
hepatocyte | 1.02e-10 | 12 |
embryonic stem cell | 1.80e-10 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.