FFCP PHASE1:Hg19::chr18:56246628..56246637,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=115701|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20565|TSSclassifier=S|UniProt=Q86TB3|association_with_transcript=-61bp_to_AL832018_5end|description=CAGE_peak_27_at_ALPK2_5end|id=chr18:56246628..56246637,-|ontology_enrichment_celltype=CL:0000057!1.52e-13!75;CL:0002620!1.60e-11!23;CL:0000055!2.50e-11!180|ontology_enrichment_celltype_v019=CL:0002620;3.07e-15;23!CL:0000197;7.89e-12;6!CL:0000098;7.89e-12;6!CL:0002167;7.89e-12;6!CL:0000222;1.05e-08;1!CL:0000057;3.68e-07;73|ontology_enrichment_celltype_v019_2=CL:0002620,2.95e-15,23;CL:0000057,3.93e-12,76;CL:0000197,1.06e-11,6;CL:0000098,1.06e-11,6;CL:0002167,1.06e-11,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1192;8.87e-11;3!DOID:3369;1.05e-08;1!DOID:4235;1.05e-08;1!DOID:17;5.72e-07;5!DOID:450;5.72e-07;5!DOID:66;5.72e-07;5!DOID:423;5.72e-07;5!DOID:0080000;5.72e-07;5!DOID:11722;5.72e-07;5|ontology_enrichment_disease_v019_2=DOID:1192,5.15e-11,3;DOID:3369,7.75e-09,1;DOID:4235,1.22e-08,1;DOID:17,5.24e-07,5;DOID:450,5.24e-07,5;DOID:66,5.24e-07,5;DOID:423,5.24e-07,5;DOID:0080000,5.24e-07,5;DOID:11722,5.24e-07,5|ontology_enrichment_uberon=UBERON:0002097!2.84e-08!40;UBERON:0001737!9.22e-08!9;UBERON:0002199!6.84e-07!45;UBERON:0002416!6.84e-07!45|ontology_enrichment_uberon_v019=UBERON:0001389;1.05e-08;1!UBERON:0007195;1.05e-08;1!UBERON:0000026;1.05e-08;1!UBERON:0008784;1.05e-08;1!UBERON:0006058;1.05e-08;1!UBERON:0003663;1.05e-08;1!UBERON:0004256;1.05e-08;1!UBERON:0004708;1.05e-08;1!UBERON:0002101;1.05e-08;1!UBERON:0004709;1.05e-08;1!UBERON:0002529;1.05e-08;1!UBERON:0010538;1.05e-08;1!UBERON:0003661;1.05e-08;1!UBERON:0010890;1.05e-08;1!UBERON:0002471;1.05e-08;1!UBERON:0001383;1.05e-08;1!UBERON:0010758;1.05e-08;1!UBERON:0010707;1.05e-08;1!UBERON:0000978;1.05e-08;1!UBERON:0002103;1.05e-08;1!UBERON:0001665;1.05e-08;1!UBERON:0003823;1.05e-08;1!UBERON:0000154;1.05e-08;1!UBERON:0010709;1.05e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0005418,9.74e-09,1;UBERON:0001389,9.74e-09,1;UBERON:0000026,9.74e-09,1;UBERON:0008784,9.74e-09,1;UBERON:0006058,9.74e-09,1;UBERON:0003663,9.74e-09,1;UBERON:0004256,9.74e-09,1;UBERON:0004708,9.74e-09,1;UBERON:0002101,9.74e-09,1;UBERON:0004709,9.74e-09,1;UBERON:0002529,9.74e-09,1;UBERON:0010538,9.74e-09,1;UBERON:0003661,9.74e-09,1;UBERON:0010890,9.74e-09,1;UBERON:0002471,9.74e-09,1;UBERON:0001383,9.74e-09,1;UBERON:0004357,9.74e-09,1;UBERON:0004347,9.74e-09,1;UBERON:0005420,9.74e-09,1;UBERON:0005732,9.74e-09,1;UBERON:0010758,9.74e-09,1;UBERON:0010707,9.74e-09,1;UBERON:0000978,9.74e-09,1;UBERON:0002103,9.74e-09,1;UBERON:0001665,9.74e-09,1;UBERON:0003823,9.74e-09,1;UBERON:0000154,9.74e-09,1;UBERON:0010709,9.74e-09,1;UBERON:0005733,9.74e-09,1;UBERON:0005730,9.74e-09,1;UBERON:0007195,1.53e-08,1;UBERON:0002097,3.34e-08,41;UBERON:0002199,3.20e-07,46;UBERON:0002416,3.20e-07,46|phase1_expression=0.726713517082227,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0.572471974262113,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,4.10468460520978,0,0,1.12135520028461,0,0,0.311211035399766,0,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,2.14541457059314,0,0,1.4351170855109,2.56268866582281,0.423863802319124,0,0.824420233907511,0.772921620136887,1.48893485065272,2.02531598689519,0.389748020644795,1.00973509697646,1.56484827691909,0.323292113637624,2.84007674013291,0.806016785821122,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.217879444092406,0.237270619111097,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0.958499421966331,0,0,0.144781306667579,0,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,2.3195768543631,1.26161932027148,1.05427273493442,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,1.84154367945675,0.280660094433074,1.66580894032411,0,0.321707842287215,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0.34444334449382,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,1.88887408098384,0,0,0,0,0,0,0.744316738719335,0.949138274156178,0.38126038784765,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=115701 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |||
|TSSclassifier=S | |||
|UniProt=Q86TB3 | |||
|association_with_transcript=-61bp_to_AL832018_5end | |||
|description=CAGE_peak_27_at_ALPK2_5end | |||
|id=chr18:56246628..56246637,- | |||
|ontology_enrichment_celltype=CL:0000057!1.52e-13!75;CL:0002620!1.60e-11!23;CL:0000055!2.50e-11!180 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.07e-15;23!CL:0000197;7.89e-12;6!CL:0000098;7.89e-12;6!CL:0002167;7.89e-12;6!CL:0000222;1.05e-08;1!CL:0000057;3.68e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.95e-15,23;CL:0000057,3.93e-12,76;CL:0000197,1.06e-11,6;CL:0000098,1.06e-11,6;CL:0002167,1.06e-11,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;8.87e-11;3!DOID:3369;1.05e-08;1!DOID:4235;1.05e-08;1!DOID:17;5.72e-07;5!DOID:450;5.72e-07;5!DOID:66;5.72e-07;5!DOID:423;5.72e-07;5!DOID:0080000;5.72e-07;5!DOID:11722;5.72e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,5.15e-11,3;DOID:3369,7.75e-09,1;DOID:4235,1.22e-08,1;DOID:17,5.24e-07,5;DOID:450,5.24e-07,5;DOID:66,5.24e-07,5;DOID:423,5.24e-07,5;DOID:0080000,5.24e-07,5;DOID:11722,5.24e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!2.84e-08!40;UBERON:0001737!9.22e-08!9;UBERON:0002199!6.84e-07!45;UBERON:0002416!6.84e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.05e-08;1!UBERON:0007195;1.05e-08;1!UBERON:0000026;1.05e-08;1!UBERON:0008784;1.05e-08;1!UBERON:0006058;1.05e-08;1!UBERON:0003663;1.05e-08;1!UBERON:0004256;1.05e-08;1!UBERON:0004708;1.05e-08;1!UBERON:0002101;1.05e-08;1!UBERON:0004709;1.05e-08;1!UBERON:0002529;1.05e-08;1!UBERON:0010538;1.05e-08;1!UBERON:0003661;1.05e-08;1!UBERON:0010890;1.05e-08;1!UBERON:0002471;1.05e-08;1!UBERON:0001383;1.05e-08;1!UBERON:0010758;1.05e-08;1!UBERON:0010707;1.05e-08;1!UBERON:0000978;1.05e-08;1!UBERON:0002103;1.05e-08;1!UBERON:0001665;1.05e-08;1!UBERON:0003823;1.05e-08;1!UBERON:0000154;1.05e-08;1!UBERON:0010709;1.05e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,9.74e-09,1;UBERON:0001389,9.74e-09,1;UBERON:0000026,9.74e-09,1;UBERON:0008784,9.74e-09,1;UBERON:0006058,9.74e-09,1;UBERON:0003663,9.74e-09,1;UBERON:0004256,9.74e-09,1;UBERON:0004708,9.74e-09,1;UBERON:0002101,9.74e-09,1;UBERON:0004709,9.74e-09,1;UBERON:0002529,9.74e-09,1;UBERON:0010538,9.74e-09,1;UBERON:0003661,9.74e-09,1;UBERON:0010890,9.74e-09,1;UBERON:0002471,9.74e-09,1;UBERON:0001383,9.74e-09,1;UBERON:0004357,9.74e-09,1;UBERON:0004347,9.74e-09,1;UBERON:0005420,9.74e-09,1;UBERON:0005732,9.74e-09,1;UBERON:0010758,9.74e-09,1;UBERON:0010707,9.74e-09,1;UBERON:0000978,9.74e-09,1;UBERON:0002103,9.74e-09,1;UBERON:0001665,9.74e-09,1;UBERON:0003823,9.74e-09,1;UBERON:0000154,9.74e-09,1;UBERON:0010709,9.74e-09,1;UBERON:0005733,9.74e-09,1;UBERON:0005730,9.74e-09,1;UBERON:0007195,1.53e-08,1;UBERON:0002097,3.34e-08,41;UBERON:0002199,3.20e-07,46;UBERON:0002416,3.20e-07,46 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0.572471974262113,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,4.10468460520978,0,0,1.12135520028461,0,0,0.311211035399766,0,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,2.14541457059314,0,0,1.4351170855109,2.56268866582281,0.423863802319124,0,0.824420233907511,0.772921620136887,1.48893485065272,2.02531598689519,0.389748020644795,1.00973509697646,1.56484827691909,0.323292113637624,2.84007674013291,0.806016785821122,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.217879444092406,0.237270619111097,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0.958499421966331,0,0,0.144781306667579,0,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,2.3195768543631,1.26161932027148,1.05427273493442,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,1.84154367945675,0.280660094433074,1.66580894032411,0,0.321707842287215,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0.34444334449382,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,1.88887408098384,0,0,0,0,0,0,0.744316738719335,0.949138274156178,0.38126038784765,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.227884111694002,0,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64127056201227,0,0,0,0,0,0,0,0,1.49494626680975,0.627617077873999,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.568209015825267,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,1.03018711554838,0,1.26184898228651,0,0.428883182749851,0,0.226705925512272,0,0.244736704506468,0,0,0,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0.581207126840626,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,1.29485767437579,1.02662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18948980281472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p27@ALPK2 | |||
}} |
Revision as of 17:52, 11 September 2013
Short description: | p27@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_27_at_ALPK2_5end |
Coexpression cluster: | NA |
Association with transcript: | -61bp_to_AL832018_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.95e-15 | 23 |
fibroblast | 3.93e-12 | 76 |
receptor cell | 1.06e-11 | 6 |
sensory epithelial cell | 1.06e-11 | 6 |
olfactory epithelial cell | 1.06e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 9.74e-09 | 1 |
soleus muscle | 9.74e-09 | 1 |
appendage | 9.74e-09 | 1 |
lower limb segment | 9.74e-09 | 1 |
multi-limb segment region | 9.74e-09 | 1 |
hindlimb muscle | 9.74e-09 | 1 |
hindlimb zeugopod muscle | 9.74e-09 | 1 |
paired limb/fin | 9.74e-09 | 1 |
limb | 9.74e-09 | 1 |
pelvic appendage | 9.74e-09 | 1 |
limb segment | 9.74e-09 | 1 |
paired limb/fin segment | 9.74e-09 | 1 |
limb muscle | 9.74e-09 | 1 |
pelvic complex muscle | 9.74e-09 | 1 |
zeugopod | 9.74e-09 | 1 |
muscle of leg | 9.74e-09 | 1 |
paired limb/fin bud | 9.74e-09 | 1 |
limb bud | 9.74e-09 | 1 |
pelvic appendage bud | 9.74e-09 | 1 |
limb/fin field | 9.74e-09 | 1 |
subdivision of organism along appendicular axis | 9.74e-09 | 1 |
appendage girdle complex | 9.74e-09 | 1 |
leg | 9.74e-09 | 1 |
hindlimb | 9.74e-09 | 1 |
triceps surae | 9.74e-09 | 1 |
hindlimb zeugopod | 9.74e-09 | 1 |
posterior region of body | 9.74e-09 | 1 |
pelvic complex | 9.74e-09 | 1 |
limb field | 9.74e-09 | 1 |
hindlimb/pelvic fin field | 9.74e-09 | 1 |
stroma of bone marrow | 1.53e-08 | 1 |
skin of body | 3.34e-08 | 41 |
integument | 3.20e-07 | 46 |
integumental system | 3.20e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 5.15e-11 | 3 |
peripheral primitive neuroectodermal tumor | 7.75e-09 | 1 |
spindle cell sarcoma | 1.22e-08 | 1 |
musculoskeletal system disease | 5.24e-07 | 5 |
myotonic disease | 5.24e-07 | 5 |
muscle tissue disease | 5.24e-07 | 5 |
myopathy | 5.24e-07 | 5 |
muscular disease | 5.24e-07 | 5 |
myotonic dystrophy | 5.24e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.