FFCP PHASE1:Hg19::chr17:79426425..79426444,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:79426425..79426444,+|id=chr17:79426425..79426444,+|ontology_enrichment_celltype=CL:0000115!1.37e-18!35;CL:0002078!2.51e-15!44;CL:0002139!2.87e-15!24;CL:0005020!5.66e-14!6;CL:0002138!5.66e-14!6;CL:0005022!5.66e-14!6;CL:0000213!1.65e-10!57;CL:0000215!1.65e-10!57|ontology_enrichment_celltype_v019=CL:0002138;4.45e-46;6!CL:0000115;3.84e-34;36!CL:0002078;1.35e-25;45!CL:0002139;1.19e-24;24!CL:0002262;2.03e-16;2!CL:1000398;2.03e-16;2!CL:0000213;3.39e-16;58!CL:0000215;3.39e-16;58!CL:0002188;4.97e-15;5!CL:0002144;2.86e-11;3!CL:1000746;6.94e-11;7!CL:1000612;6.94e-11;7!CL:0002127;5.53e-09;1!CL:0000911;5.53e-09;1!CL:0000814;5.53e-09;1!CL:0000817;9.17e-09;1!CL:0000785;9.17e-09;1!CL:0000819;9.17e-09;1|ontology_enrichment_celltype_v019_2=CL:0005020,4.82e-46,6;CL:0002138,4.82e-46,6;CL:0005022,4.82e-46,6;CL:0000115,1.08e-39,36;CL:0002078,6.41e-36,45;CL:0000213,2.91e-27,58;CL:0000215,2.91e-27,58;CL:0002139,1.04e-24,24;CL:0002262,1.73e-16,2;CL:1000398,1.73e-16,2;CL:0002188,5.21e-15,5;CL:0000222,1.24e-11,121;CL:0002144,2.51e-11,3;CL:1000746,7.17e-11,7;CL:1000612,7.17e-11,7;CL:0000817,7.36e-11,3;CL:0002127,5.75e-09,1;CL:0000914,5.75e-09,1;CL:0000911,5.75e-09,1;CL:0000814,5.75e-09,1;CL:0002042,5.75e-09,1;CL:0002039,5.75e-09,1;CL:0002040,5.75e-09,1;CL:0002041,5.75e-09,1;CL:0000819,9.91e-09,1|ontology_enrichment_development_v019=CL:0005022;4.45e-46;6!UBERON:0006242;9.17e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060073;9.17e-09;1!DOID:8675;9.17e-09;1|ontology_enrichment_disease_v019_2=DOID:0060073,9.91e-09,1;DOID:8675,9.91e-09,1|ontology_enrichment_uberon=UBERON:0007023!1.01e-15!115;UBERON:0002465!3.02e-13!10;UBERON:0000477!4.26e-12!286;UBERON:0004111!3.95e-11!241;UBERON:0001473!3.22e-10!8;UBERON:0004536!3.22e-10!8;UBERON:0006558!3.22e-10!8;UBERON:0000025!9.29e-10!194;UBERON:0001049!2.25e-07!57;UBERON:0005068!2.25e-07!57;UBERON:0006241!2.25e-07!57;UBERON:0007135!2.25e-07!57|ontology_enrichment_uberon_v019=UBERON:0001473;1.76e-34;8!UBERON:0004536;1.76e-34;8!UBERON:0006558;1.76e-34;8!UBERON:0002465;1.63e-27;10!UBERON:0001281;2.03e-16;2!UBERON:0003497;2.03e-16;2!UBERON:0003909;2.03e-16;2!UBERON:0003835;2.03e-16;2!UBERON:0002405;2.69e-13;27!UBERON:0000353;5.10e-13;15!UBERON:0010523;2.86e-11;3!UBERON:0001915;2.86e-11;3!UBERON:0001982;2.86e-11;3!UBERON:0001280;2.93e-11;3!UBERON:0004647;2.93e-11;3!UBERON:0000074;6.94e-11;7!UBERON:0001229;6.94e-11;7!UBERON:0000055;2.33e-08;65|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.86e-34,8;UBERON:0004536,1.86e-34,8;UBERON:0006558,1.86e-34,8;UBERON:0002465,1.70e-27,10;UBERON:0001281,1.73e-16,2;UBERON:0003497,1.73e-16,2;UBERON:0003909,1.73e-16,2;UBERON:0003835,1.73e-16,2;UBERON:0000353,4.97e-13,15;UBERON:0000055,7.27e-12,68;UBERON:0010523,2.51e-11,3;UBERON:0001915,2.51e-11,3;UBERON:0001982,2.51e-11,3;UBERON:0001280,2.64e-11,3;UBERON:0004647,2.64e-11,3;UBERON:0005171,2.64e-11,3;UBERON:0010532,7.17e-11,7;UBERON:0000074,7.17e-11,7;UBERON:0001229,7.17e-11,7;UBERON:0001230,7.17e-11,7;UBERON:0003220,7.17e-11,7;UBERON:0005749,7.17e-11,7;UBERON:0004199,7.17e-11,7;UBERON:0004209,7.17e-11,7;UBERON:0004198,7.17e-11,7;UBERON:0003887,9.73e-11,12;UBERON:0000058,3.01e-10,19;UBERON:0002049,4.18e-10,78;UBERON:0007798,4.18e-10,78;UBERON:0005103,1.43e-09,8;UBERON:0000083,1.43e-09,8;UBERON:0009201,1.43e-09,8;UBERON:0006553,1.43e-09,8;UBERON:0003074,1.43e-09,8;UBERON:0003060,1.43e-09,8;UBERON:0000080,1.47e-08,9;UBERON:0002120,1.47e-08,9;UBERON:0004875,1.47e-08,9;UBERON:0005721,1.47e-08,9;UBERON:0005754,1.47e-08,9;UBERON:0007297,1.47e-08,9;UBERON:0002294,3.55e-08,9;UBERON:0001173,3.55e-08,9;UBERON:0004912,3.55e-08,9;UBERON:0004876,4.41e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,2.84258435086262,3.20189636418039,3.68192674041137,3.22263453687318,0,2.92874469057803,1.47065232138347,0.81014194788176,0.535798369704479,0,0.563057402416611,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3341763647451,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3943842387973,2.31492756288305,3.04406643575357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.864719720501769,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35378802386407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:79426425..79426444,+ | |||
|id=chr17:79426425..79426444,+ | |||
|ontology_enrichment_celltype=CL:0000115!1.37e-18!35;CL:0002078!2.51e-15!44;CL:0002139!2.87e-15!24;CL:0005020!5.66e-14!6;CL:0002138!5.66e-14!6;CL:0005022!5.66e-14!6;CL:0000213!1.65e-10!57;CL:0000215!1.65e-10!57 | |||
|ontology_enrichment_celltype_v019=CL:0002138;4.45e-46;6!CL:0000115;3.84e-34;36!CL:0002078;1.35e-25;45!CL:0002139;1.19e-24;24!CL:0002262;2.03e-16;2!CL:1000398;2.03e-16;2!CL:0000213;3.39e-16;58!CL:0000215;3.39e-16;58!CL:0002188;4.97e-15;5!CL:0002144;2.86e-11;3!CL:1000746;6.94e-11;7!CL:1000612;6.94e-11;7!CL:0002127;5.53e-09;1!CL:0000911;5.53e-09;1!CL:0000814;5.53e-09;1!CL:0000817;9.17e-09;1!CL:0000785;9.17e-09;1!CL:0000819;9.17e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,4.82e-46,6;CL:0002138,4.82e-46,6;CL:0005022,4.82e-46,6;CL:0000115,1.08e-39,36;CL:0002078,6.41e-36,45;CL:0000213,2.91e-27,58;CL:0000215,2.91e-27,58;CL:0002139,1.04e-24,24;CL:0002262,1.73e-16,2;CL:1000398,1.73e-16,2;CL:0002188,5.21e-15,5;CL:0000222,1.24e-11,121;CL:0002144,2.51e-11,3;CL:1000746,7.17e-11,7;CL:1000612,7.17e-11,7;CL:0000817,7.36e-11,3;CL:0002127,5.75e-09,1;CL:0000914,5.75e-09,1;CL:0000911,5.75e-09,1;CL:0000814,5.75e-09,1;CL:0002042,5.75e-09,1;CL:0002039,5.75e-09,1;CL:0002040,5.75e-09,1;CL:0002041,5.75e-09,1;CL:0000819,9.91e-09,1 | |||
|ontology_enrichment_development_v019=CL:0005022;4.45e-46;6!UBERON:0006242;9.17e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;9.17e-09;1!DOID:8675;9.17e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,9.91e-09,1;DOID:8675,9.91e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.01e-15!115;UBERON:0002465!3.02e-13!10;UBERON:0000477!4.26e-12!286;UBERON:0004111!3.95e-11!241;UBERON:0001473!3.22e-10!8;UBERON:0004536!3.22e-10!8;UBERON:0006558!3.22e-10!8;UBERON:0000025!9.29e-10!194;UBERON:0001049!2.25e-07!57;UBERON:0005068!2.25e-07!57;UBERON:0006241!2.25e-07!57;UBERON:0007135!2.25e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.76e-34;8!UBERON:0004536;1.76e-34;8!UBERON:0006558;1.76e-34;8!UBERON:0002465;1.63e-27;10!UBERON:0001281;2.03e-16;2!UBERON:0003497;2.03e-16;2!UBERON:0003909;2.03e-16;2!UBERON:0003835;2.03e-16;2!UBERON:0002405;2.69e-13;27!UBERON:0000353;5.10e-13;15!UBERON:0010523;2.86e-11;3!UBERON:0001915;2.86e-11;3!UBERON:0001982;2.86e-11;3!UBERON:0001280;2.93e-11;3!UBERON:0004647;2.93e-11;3!UBERON:0000074;6.94e-11;7!UBERON:0001229;6.94e-11;7!UBERON:0000055;2.33e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.86e-34,8;UBERON:0004536,1.86e-34,8;UBERON:0006558,1.86e-34,8;UBERON:0002465,1.70e-27,10;UBERON:0001281,1.73e-16,2;UBERON:0003497,1.73e-16,2;UBERON:0003909,1.73e-16,2;UBERON:0003835,1.73e-16,2;UBERON:0000353,4.97e-13,15;UBERON:0000055,7.27e-12,68;UBERON:0010523,2.51e-11,3;UBERON:0001915,2.51e-11,3;UBERON:0001982,2.51e-11,3;UBERON:0001280,2.64e-11,3;UBERON:0004647,2.64e-11,3;UBERON:0005171,2.64e-11,3;UBERON:0010532,7.17e-11,7;UBERON:0000074,7.17e-11,7;UBERON:0001229,7.17e-11,7;UBERON:0001230,7.17e-11,7;UBERON:0003220,7.17e-11,7;UBERON:0005749,7.17e-11,7;UBERON:0004199,7.17e-11,7;UBERON:0004209,7.17e-11,7;UBERON:0004198,7.17e-11,7;UBERON:0003887,9.73e-11,12;UBERON:0000058,3.01e-10,19;UBERON:0002049,4.18e-10,78;UBERON:0007798,4.18e-10,78;UBERON:0005103,1.43e-09,8;UBERON:0000083,1.43e-09,8;UBERON:0009201,1.43e-09,8;UBERON:0006553,1.43e-09,8;UBERON:0003074,1.43e-09,8;UBERON:0003060,1.43e-09,8;UBERON:0000080,1.47e-08,9;UBERON:0002120,1.47e-08,9;UBERON:0004875,1.47e-08,9;UBERON:0005721,1.47e-08,9;UBERON:0005754,1.47e-08,9;UBERON:0007297,1.47e-08,9;UBERON:0002294,3.55e-08,9;UBERON:0001173,3.55e-08,9;UBERON:0004912,3.55e-08,9;UBERON:0004876,4.41e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,2.84258435086262,3.20189636418039,3.68192674041137,3.22263453687318,0,2.92874469057803,1.47065232138347,0.81014194788176,0.535798369704479,0,0.563057402416611,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3341763647451,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3943842387973,2.31492756288305,3.04406643575357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.864719720501769,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35378802386407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231046011313244,0,0,0.105551628892876,10.2360045663807,13.9476838326743,0.647747748306418,7.71136263451447,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.298422916788,0,0,0,0,0,22.3989138789443,0,0,15.8246694730753,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,4.49137296979728,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0.234264445725339,1.094728735294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0.52418000472609,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0.671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.367182116944987,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23333154505139,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,2.73947616152849,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98150233615243,0.243835849964539,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0.469919589899268,2.32048396704878,0,0,0,0,0,0,0,1.10440093535229,0,0,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,0,0.714193294391221,0,0.124149428591716,0,0.0636471582781649,0.606351566874658,0,1.02669990325584,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr17:79426425..79426444,+ | |||
}} |
Revision as of 16:25, 11 September 2013
Short description: | p@chr17:79426425..79426444, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:79426425..79426444, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 4.82e-46 | 6 |
endothelial cell of lymphatic vessel | 4.82e-46 | 6 |
vascular lymphangioblast | 4.82e-46 | 6 |
endothelial cell | 1.08e-39 | 36 |
meso-epithelial cell | 6.41e-36 | 45 |
lining cell | 2.91e-27 | 58 |
barrier cell | 2.91e-27 | 58 |
endothelial cell of vascular tree | 1.04e-24 | 24 |
endothelial cell of sinusoid | 1.73e-16 | 2 |
endothelial cell of hepatic sinusoid | 1.73e-16 | 2 |
glomerular endothelial cell | 5.21e-15 | 5 |
mesodermal cell | 1.24e-11 | 121 |
capillary endothelial cell | 2.51e-11 | 3 |
glomerular cell | 7.17e-11 | 7 |
kidney corpuscule cell | 7.17e-11 | 7 |
precursor B cell | 7.36e-11 | 3 |
innate effector T cell | 5.75e-09 | 1 |
immature NK T cell | 5.75e-09 | 1 |
effector T cell | 5.75e-09 | 1 |
mature NK T cell | 5.75e-09 | 1 |
immature NK T cell stage IV | 5.75e-09 | 1 |
immature NK T cell stage I | 5.75e-09 | 1 |
immature NK T cell stage II | 5.75e-09 | 1 |
immature NK T cell stage III | 5.75e-09 | 1 |
B-1 B cell | 9.91e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 9.91e-09 | 1 |
lymphosarcoma | 9.91e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.