FFCP PHASE1:Hg19::chr17:42985456..42985481,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2670|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4235|TSSclassifier=W|UniProt=|association_with_transcript=133bp_to_AK124465_5end|coexpression_cluster_id=C3632|description=CAGE_peak_24_at_GFAP_5end|id=chr17:42985456..42985481,-|ontology_enrichment_celltype=CL:0000128!1.16e-12!7;CL:0000126!1.16e-12!7;CL:0000127!1.16e-12!7;CL:0002453!1.16e-12!7;CL:0002605!7.50e-12!3;CL:0002319!6.52e-07!25|ontology_enrichment_celltype_v019=CL:0002605;3.09e-18;3!CL:0000128;1.45e-13;7!CL:0000126;1.45e-13;7!CL:0000127;1.45e-13;7|ontology_enrichment_celltype_v019_2=CL:0002605,1.76e-18,3;CL:0000128,1.10e-13,7;CL:0000126,1.10e-13,7;CL:0000127,1.10e-13,7;CL:0002453,1.10e-13,7|ontology_enrichment_development_v019=UBERON:0006241;1.38e-19;3!UBERON:0003057;1.38e-19;3!UBERON:0006601;1.28e-12;82!UBERON:0005425;1.05e-07;1!UBERON:0006222;1.68e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.88e-131!57;UBERON:0005068!5.88e-131!57;UBERON:0006241!5.88e-131!57;UBERON:0007135!5.88e-131!57;UBERON:0001017!2.14e-112!82;UBERON:0002616!4.88e-109!59;UBERON:0005743!8.83e-107!86;UBERON:0000073!4.69e-100!94;UBERON:0001016!4.69e-100!94;UBERON:0000955!1.07e-99!69;UBERON:0006238!1.07e-99!69;UBERON:0002780!6.75e-94!41;UBERON:0001890!6.75e-94!41;UBERON:0006240!6.75e-94!41;UBERON:0003080!1.66e-91!42;UBERON:0003075!9.13e-88!86;UBERON:0007284!9.13e-88!86;UBERON:0002346!1.98e-83!90;UBERON:0002020!6.70e-83!34;UBERON:0003528!6.70e-83!34;UBERON:0001893!2.25e-82!34;UBERON:0002791!2.07e-79!33;UBERON:0001869!1.60e-75!32;UBERON:0003056!9.63e-61!61;UBERON:0007023!1.89e-55!115;UBERON:0000033!1.05e-54!123;UBERON:0000956!4.47e-54!25;UBERON:0000203!4.47e-54!25;UBERON:0000153!1.06e-51!129;UBERON:0007811!1.06e-51!129;UBERON:0004121!1.65e-51!169;UBERON:0000924!4.42e-50!173;UBERON:0006601!4.42e-50!173;UBERON:0002619!2.37e-44!22;UBERON:0003076!2.43e-38!15;UBERON:0003057!2.43e-38!15;UBERON:0001950!3.07e-38!20;UBERON:0004732!2.25e-31!13;UBERON:0000025!2.46e-31!194;UBERON:0002308!1.79e-30!9;UBERON:0000125!1.79e-30!9;UBERON:0002420!3.02e-30!9;UBERON:0007245!3.02e-30!9;UBERON:0010009!3.02e-30!9;UBERON:0010011!3.02e-30!9;UBERON:0000454!3.02e-30!9;UBERON:0004733!6.60e-28!12;UBERON:0002028!6.60e-28!12;UBERON:0007277!6.60e-28!12;UBERON:0009663!1.43e-23!7;UBERON:0004111!3.95e-23!241;UBERON:0002298!5.23e-22!8;UBERON:0000477!6.15e-19!286;UBERON:0002680!4.08e-18!9;UBERON:0001895!4.08e-18!9;UBERON:0010092!4.08e-18!9;UBERON:0000349!1.08e-17!5;UBERON:0000483!1.02e-16!309;UBERON:0000119!1.88e-16!312;UBERON:0000064!5.29e-16!219;UBERON:0001871!2.83e-15!7;UBERON:0000475!3.39e-14!365;UBERON:0000200!6.28e-14!6;UBERON:0000369!1.12e-13!4;UBERON:0002435!1.12e-13!4;UBERON:0000204!1.12e-13!4;UBERON:0010082!1.12e-13!4;UBERON:0001894!9.78e-13!7;UBERON:0006222!9.78e-13!7;UBERON:0002240!1.60e-12!3;UBERON:0001896!4.50e-12!3;UBERON:0005290!4.50e-12!3;UBERON:0010096!4.50e-12!3;UBERON:0006331!5.02e-12!3;UBERON:0000988!1.33e-11!3;UBERON:0002021!1.52e-11!5;UBERON:0001872!5.34e-11!5;UBERON:0002771!5.47e-11!3;UBERON:0005383!8.57e-11!3;UBERON:0005382!8.57e-11!3;UBERON:0002037!3.53e-09!6;UBERON:0006215!3.53e-09!6;UBERON:0000062!7.51e-09!511;UBERON:0005162!8.90e-09!2;UBERON:0000122!8.90e-09!2;UBERON:0002148!1.24e-08!2;UBERON:0009662!1.24e-08!2;UBERON:0001897!1.86e-08!2;UBERON:0001876!2.16e-08!2;UBERON:0001875!2.99e-08!2;UBERON:0006514!2.99e-08!2;UBERON:0001954!3.98e-08!2;UBERON:0003022!3.98e-08!2;UBERON:0002421!3.98e-08!2;UBERON:0002600!3.98e-08!2;UBERON:0001873!6.09e-08!2;UBERON:0010122!6.09e-08!2;UBERON:0001905!1.10e-07!2;UBERON:0002757!1.10e-07!2;UBERON:0010134!1.10e-07!2;UBERON:0002784!1.10e-07!2;UBERON:0005408!1.10e-07!2;UBERON:0001899!1.10e-07!2;UBERON:0005174!1.19e-07!5;UBERON:0001137!1.19e-07!5;UBERON:0000923!2.09e-07!604;UBERON:0005291!2.09e-07!604;UBERON:0006598!2.09e-07!604;UBERON:0002532!2.09e-07!604;UBERON:0002050!2.25e-07!605;UBERON:0005423!2.25e-07!605;UBERON:0000481!2.44e-07!347;UBERON:0000922!3.76e-07!612;UBERON:0000467!9.48e-07!625|ontology_enrichment_uberon_v019=UBERON:0000073;3.35e-41;53!UBERON:0002616;3.35e-41;53!UBERON:0002780;1.47e-40;41!UBERON:0001890;1.47e-40;41!UBERON:0003528;2.96e-34;34!UBERON:0002020;2.96e-34;34!UBERON:0002791;3.45e-33;32!UBERON:0001893;7.47e-33;34!UBERON:0001869;3.47e-30;32!UBERON:0001017;1.15e-25;75!UBERON:0002298;4.24e-25;6!UBERON:0000956;5.97e-25;25!UBERON:0000203;5.97e-25;25!UBERON:0000955;2.60e-24;68!UBERON:0000125;2.97e-23;9!UBERON:0002308;2.97e-23;9!UBERON:0002420;8.65e-23;9!UBERON:0007245;8.65e-23;9!UBERON:0010009;8.65e-23;9!UBERON:0010011;8.65e-23;9!UBERON:0000454;8.65e-23;9!UBERON:0004732;6.02e-22;13!UBERON:0001016;5.11e-20;83!UBERON:0002240;1.38e-19;3!UBERON:0005174;1.38e-19;3!UBERON:0001137;1.38e-19;3!UBERON:0001896;9.36e-19;3!UBERON:0005290;9.36e-19;3!UBERON:0000349;1.41e-18;5!UBERON:0004733;1.68e-17;12!UBERON:0002028;1.68e-17;12!UBERON:0002619;5.61e-15;22!UBERON:0002784;8.07e-14;4!UBERON:0001894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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2670 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4235 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=133bp_to_AK124465_5end | |||
|coexpression_cluster_id=C3632 | |||
|description=CAGE_peak_24_at_GFAP_5end | |||
|id=chr17:42985456..42985481,- | |||
|ontology_enrichment_celltype=CL:0000128!1.16e-12!7;CL:0000126!1.16e-12!7;CL:0000127!1.16e-12!7;CL:0002453!1.16e-12!7;CL:0002605!7.50e-12!3;CL:0002319!6.52e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002605;3.09e-18;3!CL:0000128;1.45e-13;7!CL:0000126;1.45e-13;7!CL:0000127;1.45e-13;7 | |||
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|short_description=p24@GFAP | |||
}} |
Revision as of 13:59, 11 September 2013
Short description: | p24@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_24_at_GFAP_5end |
Coexpression cluster: | C3632_optic_spinal_occipital_diencephalon_brain_cerebral_thalamus |
Association with transcript: | 133bp_to_AK124465_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.76e-18 | 3 |
oligodendrocyte | 1.10e-13 | 7 |
macroglial cell | 1.10e-13 | 7 |
astrocyte | 1.10e-13 | 7 |
oligodendrocyte precursor cell | 1.10e-13 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.