FFCP PHASE1:Hg19::chr16:6069152..6069161,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54715|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18222|TSSclassifier=S|UniProt=Q59HD3,Q9NWB1|association_with_transcript=20bp_to_ENST00000550418,ENST00000553186,NM_001142333,NM_018723,uc002cyr.1,uc002cys.2,uc002cyt.2,uc010buf.1_5end|coexpression_cluster_id=C10|description=CAGE_peak_34_at_RBFOX1_5end|id=chr16:6069152..6069161,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001869!6.96e-99!32;UBERON:0001893!6.58e-93!34;UBERON:0002791!1.64e-88!33;UBERON:0002020!7.99e-86!34;UBERON:0003528!7.99e-86!34;UBERON:0002619!2.75e-84!22;UBERON:0002780!1.51e-82!41;UBERON:0001890!1.51e-82!41;UBERON:0006240!1.51e-82!41;UBERON:0003080!1.72e-80!42;UBERON:0001049!1.45e-77!57;UBERON:0005068!1.45e-77!57;UBERON:0006241!1.45e-77!57;UBERON:0007135!1.45e-77!57;UBERON:0000955!6.31e-76!69;UBERON:0006238!6.31e-76!69;UBERON:0001017!1.02e-75!82;UBERON:0002616!9.12e-75!59;UBERON:0001950!9.85e-75!20;UBERON:0000956!4.87e-74!25;UBERON:0000203!4.87e-74!25;UBERON:0005743!5.81e-72!86;UBERON:0000073!1.20e-64!94;UBERON:0001016!1.20e-64!94;UBERON:0003056!5.12e-54!61;UBERON:0003075!4.91e-53!86;UBERON:0007284!4.91e-53!86;UBERON:0002346!2.05e-50!90;UBERON:0000033!7.60e-43!123;UBERON:0000153!1.44e-40!129;UBERON:0007811!1.44e-40!129;UBERON:0007023!4.47e-38!115;UBERON:0004121!2.08e-33!169;UBERON:0000924!1.73e-32!173;UBERON:0006601!1.73e-32!173;UBERON:0000200!9.63e-30!6;UBERON:0002021!1.88e-25!5;UBERON:0001871!2.31e-22!7;UBERON:0002420!3.88e-20!9;UBERON:0007245!3.88e-20!9;UBERON:0010009!3.88e-20!9;UBERON:0010011!3.88e-20!9;UBERON:0000454!3.88e-20!9;UBERON:0000025!1.73e-18!194;UBERON:0009663!2.47e-18!7;UBERON:0001872!9.72e-17!5;UBERON:0000349!1.58e-16!5;UBERON:0002771!8.99e-16!3;UBERON:0000064!2.13e-14!219;UBERON:0002308!3.28e-14!9;UBERON:0000125!3.28e-14!9;UBERON:0004111!1.28e-13!241;UBERON:0000369!2.26e-12!4;UBERON:0002435!2.26e-12!4;UBERON:0000204!2.26e-12!4;UBERON:0010082!2.26e-12!4;UBERON:0001870!1.45e-11!2;UBERON:0000477!2.07e-11!286;UBERON:0001954!2.85e-11!2;UBERON:0003022!2.85e-11!2;UBERON:0002421!2.85e-11!2;UBERON:0002600!2.85e-11!2;UBERON:0001875!3.50e-11!2;UBERON:0006514!3.50e-11!2;UBERON:0000483!4.51e-10!309;UBERON:0000475!6.12e-10!365;UBERON:0000119!6.54e-10!312;UBERON:0005383!4.35e-08!3;UBERON:0005382!4.35e-08!3;UBERON:0001874!9.81e-07!1|ontology_enrichment_uberon_v019=UBERON:0001874;2.73e-29;1!UBERON:0002021;1.21e-23;5!UBERON:0001950;4.78e-22;20!UBERON:0002791;1.45e-21;32!UBERON:0002619;3.48e-20;22!UBERON:0001869;6.47e-20;32!UBERON:0003528;2.94e-18;34!UBERON:0002020;2.94e-18;34!UBERON:0001893;3.07e-18;34!UBERON:0000956;6.30e-18;25!UBERON:0000203;6.30e-18;25!UBERON:0002780;5.53e-14;41!UBERON:0001890;5.53e-14;41!UBERON:0000922;7.86e-14;49!UBERON:0000955;1.66e-12;68!UBERON:0002114;7.78e-11;2!UBERON:0005383;1.04e-10;3!UBERON:0005382;1.04e-10;3!UBERON:0000073;3.11e-09;53!UBERON:0002616;3.11e-09;53!UBERON:0001016;9.00e-09;83!UBERON:0001017;9.33e-09;75!UBERON:0000369;2.35e-08;4!UBERON:0002435;2.35e-08;4!UBERON:0000204;2.35e-08;4!UBERON:0002108;5.23e-07;4!UBERON:0001872;6.21e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001874,3.16e-29,1;UBERON:0002021,1.14e-23,5;UBERON:0001950,5.19e-22,20;UBERON:0002791,1.08e-21,32;UBERON:0001869,1.08e-21,32;UBERON:0003528,1.75e-20,34;UBERON:0002020,1.75e-20,34;UBERON:0001893,1.75e-20,34;UBERON:0002619,3.75e-20,22;UBERON:0000956,6.73e-18,25;UBERON:0000203,6.73e-18,25;UBERON:0002780,3.83e-17,41;UBERON:0001890,3.83e-17,41;UBERON:0003080,3.83e-17,41;UBERON:0006240,3.83e-17,41;UBERON:0000955,8.98e-15,68;UBERON:0006238,8.98e-15,68;UBERON:0000073,2.01e-13,53;UBERON:0002616,2.01e-13,53;UBERON:0001049,9.80e-13,56;UBERON:0005068,9.80e-13,56;UBERON:0006241,9.80e-13,56;UBERON:0007135,9.80e-13,56;UBERON:0001017,1.68e-12,81;UBERON:0003056,9.77e-12,61;UBERON:0001016,2.66e-11,89;UBERON:0002114,7.42e-11,2;UBERON:0005383,1.09e-10,3;UBERON:0005382,1.09e-10,3;UBERON:0003075,7.64e-09,82;UBERON:0007284,7.64e-09,82;UBERON:0002346,1.90e-08,86;UBERON:0000369,2.43e-08,4;UBERON:0002435,2.43e-08,4;UBERON:0000204,2.43e-08,4;UBERON:0010082,2.43e-08,4;UBERON:0010371,4.86e-07,104;UBERON:0002108,5.08e-07,4;UBERON:0001872,6.77e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54715 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18222 | |||
|TSSclassifier=S | |||
|UniProt=Q59HD3,Q9NWB1 | |||
|association_with_transcript=20bp_to_ENST00000550418,ENST00000553186,NM_001142333,NM_018723,uc002cyr.1,uc002cys.2,uc002cyt.2,uc010buf.1_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_34_at_RBFOX1_5end | |||
|id=chr16:6069152..6069161,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!6.96e-99!32;UBERON:0001893!6.58e-93!34;UBERON:0002791!1.64e-88!33;UBERON:0002020!7.99e-86!34;UBERON:0003528!7.99e-86!34;UBERON:0002619!2.75e-84!22;UBERON:0002780!1.51e-82!41;UBERON:0001890!1.51e-82!41;UBERON:0006240!1.51e-82!41;UBERON:0003080!1.72e-80!42;UBERON:0001049!1.45e-77!57;UBERON:0005068!1.45e-77!57;UBERON:0006241!1.45e-77!57;UBERON:0007135!1.45e-77!57;UBERON:0000955!6.31e-76!69;UBERON:0006238!6.31e-76!69;UBERON:0001017!1.02e-75!82;UBERON:0002616!9.12e-75!59;UBERON:0001950!9.85e-75!20;UBERON:0000956!4.87e-74!25;UBERON:0000203!4.87e-74!25;UBERON:0005743!5.81e-72!86;UBERON:0000073!1.20e-64!94;UBERON:0001016!1.20e-64!94;UBERON:0003056!5.12e-54!61;UBERON:0003075!4.91e-53!86;UBERON:0007284!4.91e-53!86;UBERON:0002346!2.05e-50!90;UBERON:0000033!7.60e-43!123;UBERON:0000153!1.44e-40!129;UBERON:0007811!1.44e-40!129;UBERON:0007023!4.47e-38!115;UBERON:0004121!2.08e-33!169;UBERON:0000924!1.73e-32!173;UBERON:0006601!1.73e-32!173;UBERON:0000200!9.63e-30!6;UBERON:0002021!1.88e-25!5;UBERON:0001871!2.31e-22!7;UBERON:0002420!3.88e-20!9;UBERON:0007245!3.88e-20!9;UBERON:0010009!3.88e-20!9;UBERON:0010011!3.88e-20!9;UBERON:0000454!3.88e-20!9;UBERON:0000025!1.73e-18!194;UBERON:0009663!2.47e-18!7;UBERON:0001872!9.72e-17!5;UBERON:0000349!1.58e-16!5;UBERON:0002771!8.99e-16!3;UBERON:0000064!2.13e-14!219;UBERON:0002308!3.28e-14!9;UBERON:0000125!3.28e-14!9;UBERON:0004111!1.28e-13!241;UBERON:0000369!2.26e-12!4;UBERON:0002435!2.26e-12!4;UBERON:0000204!2.26e-12!4;UBERON:0010082!2.26e-12!4;UBERON:0001870!1.45e-11!2;UBERON:0000477!2.07e-11!286;UBERON:0001954!2.85e-11!2;UBERON:0003022!2.85e-11!2;UBERON:0002421!2.85e-11!2;UBERON:0002600!2.85e-11!2;UBERON:0001875!3.50e-11!2;UBERON:0006514!3.50e-11!2;UBERON:0000483!4.51e-10!309;UBERON:0000475!6.12e-10!365;UBERON:0000119!6.54e-10!312;UBERON:0005383!4.35e-08!3;UBERON:0005382!4.35e-08!3;UBERON:0001874!9.81e-07!1 | |||
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|short_description=p34@RBFOX1 | |||
}} |
Revision as of 11:00, 11 September 2013
Short description: | p34@RBFOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_34_at_RBFOX1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 20bp_to_ENST00000550418, ENST00000553186, NM_001142333, NM_018723, uc002cyr.1, uc002cys.2, uc002cyt.2, uc010buf.1_5end |
EntrezGene: | RBFOX1 |
HGNC: | 18222 |
UniProt: | Q59HD3Q9NWB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.