FFCP PHASE1:Hg19::chr14:61125184..61125196,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6495|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10887|TSSclassifier=S|UniProt=|association_with_transcript=-207bp_to_ENST00000554986_5end|coexpression_cluster_id=C309|description=CAGE_peak_8_at_SIX1_5end|id=chr14:61125184..61125196,-|ontology_enrichment_celltype=CL:0000197!8.64e-12!6;CL:0000098!8.64e-12!6;CL:0002167!8.64e-12!6;CL:0000188!7.34e-11!9;CL:0000515!1.25e-09!4;CL:0002602!2.43e-09!2;CL:0000710!5.88e-07!20|ontology_enrichment_celltype_v019=CL:0000197;2.52e-30;6!CL:0000098;2.52e-30;6!CL:0002167;2.52e-30;6!CL:0000228;6.31e-21;1!CL:0002372;6.31e-21;1!CL:0000710;1.36e-09;20!CL:0000214;5.54e-08;3!CL:0002564;7.26e-08;3!CL:0000075;2.96e-07;27|ontology_enrichment_celltype_v019_2=CL:0000197,2.28e-30,6;CL:0000098,2.28e-30,6;CL:0002167,2.28e-30,6;CL:0000228,7.72e-21,1;CL:0002372,7.72e-21,1;CL:0000710,1.32e-09,20;CL:0000214,5.93e-08,3;CL:0002564,8.29e-08,3;CL:0000075,2.90e-07,27|ontology_enrichment_development_v019=UBERON:0003099;1.53e-21;1!UBERON:0003852;1.53e-21;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3307;3.70e-11;2|ontology_enrichment_disease_v019_2=DOID:3307,3.02e-11,2|ontology_enrichment_uberon=UBERON:0000075!9.18e-11!13;UBERON:0005944!9.18e-11!13;UBERON:0004288!9.18e-11!13;UBERON:0003089!9.18e-11!13;UBERON:0000007!8.55e-10!2;UBERON:0004089!1.15e-09!2;UBERON:0009568!2.43e-09!2;UBERON:0002216!2.43e-09!2;UBERON:0002209!2.43e-09!2;UBERON:0002213!2.43e-09!2;UBERON:0004267!2.43e-09!2;UBERON:0006444!2.43e-09!2;UBERON:0001995!2.43e-09!2;UBERON:0004715!2.43e-09!2;UBERON:0001468!2.43e-09!2;UBERON:0001130!2.43e-09!2;UBERON:0001066!2.43e-09!2;UBERON:0004905!3.46e-08!5;UBERON:0000982!3.46e-08!5;UBERON:0004770!3.46e-08!5;UBERON:0000914!2.52e-07!83;UBERON:0002329!2.52e-07!83;UBERON:0003077!2.52e-07!83;UBERON:0003059!2.52e-07!83;UBERON:0007282!2.52e-07!83;UBERON:0009618!2.52e-07!83;UBERON:0007285!2.52e-07!83;UBERON:0002090!6.45e-07!6|ontology_enrichment_uberon_v019=UBERON:0000007;1.64e-40;2!UBERON:0005705;1.53e-21;1!UBERON:0008193;1.53e-21;1!UBERON:0010912;1.53e-21;1!UBERON:0002514;1.53e-21;1!UBERON:0003457;1.53e-21;1!UBERON:0008907;1.53e-21;1!UBERON:0008001;1.53e-21;1!UBERON:0007213;1.53e-21;1!UBERON:0009891;1.53e-21;1!UBERON:0007914;1.53e-21;1!UBERON:0007375;1.53e-21;1!UBERON:0003323;1.53e-21;1!UBERON:0010258;1.53e-21;1!UBERON:0005253;1.53e-21;1!UBERON:0007842;1.53e-21;1!UBERON:0002397;1.53e-21;1!UBERON:0003113;1.53e-21;1!UBERON:0003277;1.53e-21;1!UBERON:0001709;1.53e-21;1!UBERON:0002244;1.53e-21;1!UBERON:0005620;1.53e-21;1!UBERON:0010364;1.53e-21;1!UBERON:0004288;1.53e-21;1!UBERON:0003296;7.74e-21;4!UBERON:0010133;7.74e-21;4!UBERON:0001894;2.37e-12;7!UBERON:0004089;1.82e-11;2!UBERON:0004905;6.94e-11;8!UBERON:0000982;6.94e-11;8!UBERON:0004770;6.94e-11;8!UBERON:0006915;5.54e-08;3!UBERON:0007616;5.54e-08;3!UBERON:0002217;5.54e-08;3!UBERON:0002018;5.54e-08;3!UBERON:0002242;7.26e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.34e-40,2;UBERON:0005705,1.53e-21,1;UBERON:0008193,1.53e-21,1;UBERON:0010912,1.53e-21,1;UBERON:0002514,1.53e-21,1;UBERON:0003457,1.53e-21,1;UBERON:0008907,1.53e-21,1;UBERON:0008001,1.53e-21,1;UBERON:0007213,1.53e-21,1;UBERON:0009891,1.53e-21,1;UBERON:0007914,1.53e-21,1;UBERON:0009292,1.53e-21,1;UBERON:0003099,1.53e-21,1;UBERON:0007375,1.53e-21,1;UBERON:0003323,1.53e-21,1;UBERON:0010258,1.53e-21,1;UBERON:0007842,1.53e-21,1;UBERON:0009494,1.53e-21,1;UBERON:0010042,1.53e-21,1;UBERON:0010045,1.53e-21,1;UBERON:0010259,1.53e-21,1;UBERON:0010359,1.53e-21,1;UBERON:0009526,1.53e-21,1;UBERON:0002397,1.53e-21,1;UBERON:0003113,1.53e-21,1;UBERON:0003277,1.53e-21,1;UBERON:0001709,1.53e-21,1;UBERON:0004066,1.53e-21,1;UBERON:0002244,1.53e-21,1;UBERON:0005620,1.53e-21,1;UBERON:0004362,1.53e-21,1;UBERON:0010364,1.53e-21,1;UBERON:0010046,1.53e-21,1;UBERON:0005868,1.53e-21,1;UBERON:0007238,1.53e-21,1;UBERON:0004288,1.53e-21,1;UBERON:0004068,1.53e-21,1;UBERON:0010334,1.53e-21,1;UBERON:0003852,1.53e-21,1;UBERON:0010253,1.53e-21,1;UBERON:0003296,7.00e-21,4;UBERON:0010133,7.00e-21,4;UBERON:0001894,2.24e-12,7;UBERON:0006222,2.24e-12,7;UBERON:0005253,1.82e-11,2;UBERON:0004089,1.82e-11,2;UBERON:0004905,8.06e-11,8;UBERON:0000982,8.06e-11,8;UBERON:0004770,8.06e-11,8;UBERON:0006915,5.93e-08,3;UBERON:0007616,5.93e-08,3;UBERON:0002217,5.93e-08,3;UBERON:0002018,5.93e-08,3;UBERON:0002242,8.29e-08,3;UBERON:0003068,8.29e-08,3;UBERON:0002328,8.29e-08,3;UBERON:0004880,8.29e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.990130823680373,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.491337269247072,0,0,0,0,0,0.168336113954066,0.375355559615893,0,0,0,0.150238058906597,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6495 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10887 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-207bp_to_ENST00000554986_5end | |||
|coexpression_cluster_id=C309 | |||
|description=CAGE_peak_8_at_SIX1_5end | |||
|id=chr14:61125184..61125196,- | |||
|ontology_enrichment_celltype=CL:0000197!8.64e-12!6;CL:0000098!8.64e-12!6;CL:0002167!8.64e-12!6;CL:0000188!7.34e-11!9;CL:0000515!1.25e-09!4;CL:0002602!2.43e-09!2;CL:0000710!5.88e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000197;2.52e-30;6!CL:0000098;2.52e-30;6!CL:0002167;2.52e-30;6!CL:0000228;6.31e-21;1!CL:0002372;6.31e-21;1!CL:0000710;1.36e-09;20!CL:0000214;5.54e-08;3!CL:0002564;7.26e-08;3!CL:0000075;2.96e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,2.28e-30,6;CL:0000098,2.28e-30,6;CL:0002167,2.28e-30,6;CL:0000228,7.72e-21,1;CL:0002372,7.72e-21,1;CL:0000710,1.32e-09,20;CL:0000214,5.93e-08,3;CL:0002564,8.29e-08,3;CL:0000075,2.90e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.53e-21;1!UBERON:0003852;1.53e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;3.70e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.02e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000075!9.18e-11!13;UBERON:0005944!9.18e-11!13;UBERON:0004288!9.18e-11!13;UBERON:0003089!9.18e-11!13;UBERON:0000007!8.55e-10!2;UBERON:0004089!1.15e-09!2;UBERON:0009568!2.43e-09!2;UBERON:0002216!2.43e-09!2;UBERON:0002209!2.43e-09!2;UBERON:0002213!2.43e-09!2;UBERON:0004267!2.43e-09!2;UBERON:0006444!2.43e-09!2;UBERON:0001995!2.43e-09!2;UBERON:0004715!2.43e-09!2;UBERON:0001468!2.43e-09!2;UBERON:0001130!2.43e-09!2;UBERON:0001066!2.43e-09!2;UBERON:0004905!3.46e-08!5;UBERON:0000982!3.46e-08!5;UBERON:0004770!3.46e-08!5;UBERON:0000914!2.52e-07!83;UBERON:0002329!2.52e-07!83;UBERON:0003077!2.52e-07!83;UBERON:0003059!2.52e-07!83;UBERON:0007282!2.52e-07!83;UBERON:0009618!2.52e-07!83;UBERON:0007285!2.52e-07!83;UBERON:0002090!6.45e-07!6 | |||
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|short_description=p8@SIX1 | |||
}} |
Revision as of 04:58, 11 September 2013
Short description: | p8@SIX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SIX1_5end |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | -207bp_to_ENST00000554986_5end |
EntrezGene: | SIX1 |
HGNC: | 10887 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 2.28e-30 | 6 |
sensory epithelial cell | 2.28e-30 | 6 |
olfactory epithelial cell | 2.28e-30 | 6 |
multinucleate cell | 7.72e-21 | 1 |
myotube | 7.72e-21 | 1 |
neurecto-epithelial cell | 1.32e-09 | 20 |
synovial cell | 5.93e-08 | 3 |
nucleus pulposus cell of intervertebral disc | 8.29e-08 | 3 |
columnar/cuboidal epithelial cell | 2.90e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.02e-11 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.