FFCP PHASE1:Hg19::chr13:53602936..53602955,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10562|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17190|TSSclassifier=S|UniProt=|association_with_transcript=-16bp_to_uc001vhk.1,uc001vhl.2_5end|coexpression_cluster_id=C25|description=CAGE_peak_1_at_OLFM4_5end|id=chr13:53602936..53602955,+|ontology_enrichment_celltype=CL:0000094!9.97e-10!8|ontology_enrichment_celltype_v019=CL:0000094;8.84e-13;8!CL:0000081;4.25e-09;11!CL:0000771;6.97e-07;2|ontology_enrichment_celltype_v019_2=CL:0000094,7.87e-13,8;CL:0000081,3.91e-09,11;CL:0000771,6.77e-07,2|ontology_enrichment_development_v019=UBERON:0006603;4.37e-09;65!UBERON:0004872;3.98e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.02e-56!115;UBERON:0000178!2.28e-11!15;UBERON:0000179!2.28e-11!15;UBERON:0000463!2.28e-11!15;UBERON:0001049!7.72e-09!57;UBERON:0005068!7.72e-09!57;UBERON:0006241!7.72e-09!57;UBERON:0007135!7.72e-09!57;UBERON:0002619!2.63e-08!22;UBERON:0001950!5.81e-08!20;UBERON:0003080!1.44e-07!42;UBERON:0002616!2.03e-07!59;UBERON:0002791!2.31e-07!33;UBERON:0001893!4.84e-07!34;UBERON:0000956!5.56e-07!25;UBERON:0000203!5.56e-07!25;UBERON:0002020!6.57e-07!34;UBERON:0003528!6.57e-07!34;UBERON:0002780!8.51e-07!41;UBERON:0001890!8.51e-07!41;UBERON:0006240!8.51e-07!41|ontology_enrichment_uberon_v019=UBERON:0004921;2.69e-11;33!UBERON:0000160;2.05e-10;17!UBERON:0004177;4.73e-10;5!UBERON:0005057;4.73e-10;5!UBERON:0005409;7.37e-10;22!UBERON:0000077;4.02e-09;27!UBERON:0002075;2.91e-07;18!UBERON:0000059;3.43e-07;11!UBERON:0002370;5.41e-07;2!UBERON:0005058;5.41e-07;2!UBERON:0009113;5.41e-07;2!UBERON:0000922;6.12e-07;49!UBERON:0001255;6.97e-07;2!UBERON:0001556;6.97e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.34e-25,114;UBERON:0005409,9.60e-13,25;UBERON:0004921,1.78e-10,118;UBERON:0000160,2.05e-10,17;UBERON:0001007,5.76e-09,145;UBERON:0001555,5.76e-09,145;UBERON:0007026,5.76e-09,145;UBERON:0000077,2.37e-08,29;UBERON:0004119,2.94e-08,160;UBERON:0000925,2.94e-08,160;UBERON:0006595,2.94e-08,160;UBERON:0002075,3.10e-07,18;UBERON:0000059,3.43e-07,11;UBERON:0004177,3.70e-07,7;UBERON:0005057,3.70e-07,7;UBERON:0001046,6.32e-07,19;UBERON:0001255,6.97e-07,2;UBERON:0001556,6.97e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.65401409067589,14.2016877295969,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0.689491361473237,0,0,0.188242339542605,0,0,0.612167784741805,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,3.27447688744282,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,12.4324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,1.40354529212299,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.9630799869292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.0259400210143,0,0,0,0,0.507447609232169,1.52927441428475,1.13929437434833,0.238231775457789,0.411362273086194,0.648473311192717,2.70015718619057,1.58625035258854,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33228787199128,0,0,0.439524537815682,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.796991953004279,61.3350292479148,0,0,0,0,0,0,0,42.1207342069707,2.3948309234694,0,0,0.371072392647405,0,0,0,10.1499940560871,0,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0,0,0,2.92789862985067,276.328378287135,0,0,0,0,0,0,5.86338253620498,0,0,0,0,0,0,0,0,0,0,0,0,194.076076560308,670.331423806304,127.705300291128,0,0,0,0.808813595768125,0,0,0,0.19566461893209,0,0.394584402849391,934.048327895685,0,1.89559738885464,0,0,0,0,0,0,0,0,0,0,0.261177619741208,15.7254001417827,0,0,0,0,1.35784623083787,0,8.58726814966023,0,0,0.126621591911757,0,1.04206466326994,22.6260174423714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,4.68660060627932,22.7751971730002,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.121499113316049,0,34.595705504348,9.02218915921967,0,0,0,6.4322579373603,0,0,0,0,0,0,0,0,0,0.439656701034247,14.5757577803443,0,0.13223260174269,0,0,9.29050489338944,1.88645166119599,0,0.992332043623902,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,1.3771002377715,0,0.3327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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10562 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17190 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-16bp_to_uc001vhk.1,uc001vhl.2_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_OLFM4_5end | |||
|id=chr13:53602936..53602955,+ | |||
|ontology_enrichment_celltype=CL:0000094!9.97e-10!8 | |||
|ontology_enrichment_celltype_v019=CL:0000094;8.84e-13;8!CL:0000081;4.25e-09;11!CL:0000771;6.97e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,7.87e-13,8;CL:0000081,3.91e-09,11;CL:0000771,6.77e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006603;4.37e-09;65!UBERON:0004872;3.98e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.02e-56!115;UBERON:0000178!2.28e-11!15;UBERON:0000179!2.28e-11!15;UBERON:0000463!2.28e-11!15;UBERON:0001049!7.72e-09!57;UBERON:0005068!7.72e-09!57;UBERON:0006241!7.72e-09!57;UBERON:0007135!7.72e-09!57;UBERON:0002619!2.63e-08!22;UBERON:0001950!5.81e-08!20;UBERON:0003080!1.44e-07!42;UBERON:0002616!2.03e-07!59;UBERON:0002791!2.31e-07!33;UBERON:0001893!4.84e-07!34;UBERON:0000956!5.56e-07!25;UBERON:0000203!5.56e-07!25;UBERON:0002020!6.57e-07!34;UBERON:0003528!6.57e-07!34;UBERON:0002780!8.51e-07!41;UBERON:0001890!8.51e-07!41;UBERON:0006240!8.51e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.69e-11;33!UBERON:0000160;2.05e-10;17!UBERON:0004177;4.73e-10;5!UBERON:0005057;4.73e-10;5!UBERON:0005409;7.37e-10;22!UBERON:0000077;4.02e-09;27!UBERON:0002075;2.91e-07;18!UBERON:0000059;3.43e-07;11!UBERON:0002370;5.41e-07;2!UBERON:0005058;5.41e-07;2!UBERON:0009113;5.41e-07;2!UBERON:0000922;6.12e-07;49!UBERON:0001255;6.97e-07;2!UBERON:0001556;6.97e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.34e-25,114;UBERON:0005409,9.60e-13,25;UBERON:0004921,1.78e-10,118;UBERON:0000160,2.05e-10,17;UBERON:0001007,5.76e-09,145;UBERON:0001555,5.76e-09,145;UBERON:0007026,5.76e-09,145;UBERON:0000077,2.37e-08,29;UBERON:0004119,2.94e-08,160;UBERON:0000925,2.94e-08,160;UBERON:0006595,2.94e-08,160;UBERON:0002075,3.10e-07,18;UBERON:0000059,3.43e-07,11;UBERON:0004177,3.70e-07,7;UBERON:0005057,3.70e-07,7;UBERON:0001046,6.32e-07,19;UBERON:0001255,6.97e-07,2;UBERON:0001556,6.97e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.65401409067589,14.2016877295969,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0.689491361473237,0,0,0.188242339542605,0,0,0.612167784741805,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,3.27447688744282,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,12.4324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,1.40354529212299,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.9630799869292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.0259400210143,0,0,0,0,0.507447609232169,1.52927441428475,1.13929437434833,0.238231775457789,0.411362273086194,0.648473311192717,2.70015718619057,1.58625035258854,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33228787199128,0,0,0.439524537815682,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.796991953004279,61.3350292479148,0,0,0,0,0,0,0,42.1207342069707,2.3948309234694,0,0,0.371072392647405,0,0,0,10.1499940560871,0,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0,0,0,2.92789862985067,276.328378287135,0,0,0,0,0,0,5.86338253620498,0,0,0,0,0,0,0,0,0,0,0,0,194.076076560308,670.331423806304,127.705300291128,0,0,0,0.808813595768125,0,0,0,0.19566461893209,0,0.394584402849391,934.048327895685,0,1.89559738885464,0,0,0,0,0,0,0,0,0,0,0.261177619741208,15.7254001417827,0,0,0,0,1.35784623083787,0,8.58726814966023,0,0,0.126621591911757,0,1.04206466326994,22.6260174423714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,4.68660060627932,22.7751971730002,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.121499113316049,0,34.595705504348,9.02218915921967,0,0,0,6.4322579373603,0,0,0,0,0,0,0,0,0,0.439656701034247,14.5757577803443,0,0.13223260174269,0,0,9.29050489338944,1.88645166119599,0,0.992332043623902,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,1.3771002377715,0,0.332787154610557,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638535436228605,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,2.33152017882697,0,135.983437954558,0,0,0,0,0,1.03343398250592,0.0634158101939068,0,0,160.772421798131,0,92.1167103281482,0,0,0,0.227662191351298,3.01588058552972,0,0,0.0679697329768317,0.0657727735628491,0,0,86.1854159498644,0,0,54.7895232305697,0.647782773655864,0,0.214429632529969,0,0,0,0,0.414432328326074,0.17071847709395,0,9.89522925286638,0,0,0,0,0,0,0,0,0,0,0.718639647993729,0,2.4285549652957,0,0,0,0,0,0,1370.22717720656,234.73296798125,0,2.69663153929296,0,0,0,4.6492130034174,0,10.0562792238443,75.609102593006,0,0,0,0,41.6291741300515,10.0920442348999,0.430018749454354,0,0,0,730.057039911253,0,0,0,0,0,0,0,0,0,0,8.03254201113338,1.33982065078089,0,0.310298987585686,7.46318936653433,0,6.84642444261665,22.5331212893964,0,0.318235791390825,0.606351566874658,1.08858373948481,0.342233301085281,0.471464371102113,0.286888821570705,0.332660356546013,2.68630786416216,0,0,0,2.34640942403454,3.17827754875453,0,92.5401916117863,0.603821380773079,0 | |||
|short_description=p1@OLFM4 | |||
}} |
Revision as of 02:38, 11 September 2013
Short description: | p1@OLFM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_OLFM4_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -16bp_to_uc001vhk.1, uc001vhl.2_5end |
EntrezGene: | OLFM4 |
HGNC: | 17190 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 7.87e-13 | 8 |
blood cell | 3.91e-09 | 11 |
eosinophil | 6.77e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.34e-25 | 114 |
gastrointestinal system | 9.60e-13 | 25 |
subdivision of digestive tract | 1.78e-10 | 118 |
intestine | 2.05e-10 | 17 |
digestive system | 5.76e-09 | 145 |
digestive tract | 5.76e-09 | 145 |
primitive gut | 5.76e-09 | 145 |
mixed endoderm/mesoderm-derived structure | 2.37e-08 | 29 |
endoderm-derived structure | 2.94e-08 | 160 |
endoderm | 2.94e-08 | 160 |
presumptive endoderm | 2.94e-08 | 160 |
viscus | 3.10e-07 | 18 |
large intestine | 3.43e-07 | 11 |
hemopoietic organ | 3.70e-07 | 7 |
immune organ | 3.70e-07 | 7 |
hindgut | 6.32e-07 | 19 |
urinary bladder | 6.97e-07 | 2 |
lower urinary tract | 6.97e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.