FFCP PHASE1:Hg19::chr12:48152611..48152672,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10411 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16629 | |||
|TSSclassifier=S | |||
|UniProt=E7EQC8 | |||
|association_with_transcript=0bp_to_ENST00000389211,ENST00000389212,ENST00000479866_5end | |||
|description=CAGE_peak_1_at_RAPGEF3_5end | |||
|id=chr12:48152611..48152672,- | |||
|ontology_enrichment_celltype=CL:0002139!5.31e-09!24;CL:0002078!8.20e-09!44;CL:0000115!3.22e-08!35;CL:1000497!1.57e-07!18;CL:0002518!1.57e-07!18;CL:1000449!3.23e-07!16;CL:0000071!4.65e-07!18;CL:0002546!4.65e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.88e-10;24!CL:1000449;1.54e-08;15!CL:0000115;1.88e-08;36!CL:1000497;2.73e-08;17!CL:0002518;2.73e-08;17!CL:0000071;7.82e-08;18!CL:0002681;2.15e-07;12!CL:0002584;2.15e-07;12!CL:0002078;2.27e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,1.33e-10,45;CL:0002139,3.83e-10,24;CL:0000115,7.13e-10,36;CL:1000449,1.59e-08,15;CL:1000497,2.82e-08,17;CL:0002518,2.82e-08,17;CL:0000071,6.62e-08,18;CL:0002546,6.62e-08,18;CL:0002681,2.60e-07,12;CL:0002584,2.60e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;7.82e-08;18!UBERON:0006601;5.64e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@RAPGEF3 | |||
}} |
Revision as of 22:47, 10 September 2013
Short description: | p1@RAPGEF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RAPGEF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000389211, ENST00000389212, ENST00000479866_5end |
EntrezGene: | RAPGEF3 |
HGNC: | 16629 |
UniProt: | E7EQC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 1.33e-10 | 45 |
endothelial cell of vascular tree | 3.83e-10 | 24 |
endothelial cell | 7.13e-10 | 36 |
epithelial cell of nephron | 1.59e-08 | 15 |
kidney cell | 2.82e-08 | 17 |
kidney epithelial cell | 2.82e-08 | 17 |
blood vessel endothelial cell | 6.62e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.62e-08 | 18 |
kidney cortical cell | 2.60e-07 | 12 |
renal cortical epithelial cell | 2.60e-07 | 12 |
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