FFCP PHASE1:Hg19::chr12:21305486..21305488,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C5|description=CAGE_peak_at_chr12:21305486..21305488,+|id=chr12:21305486..21305488,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;2.48e-19;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.41e-19,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:3493!1.02e-09!2;DOID:4074!1.72e-09!2;DOID:4905!1.72e-09!2;DOID:3498!1.72e-09!2|ontology_enrichment_disease_v019=DOID:4929;1.46e-13;2|ontology_enrichment_disease_v019_2=DOID:4929,1.37e-13,2|ontology_enrichment_uberon=UBERON:0007499!8.12e-13!25;UBERON:0009856!2.93e-12!26;UBERON:0008835!9.76e-12!22;UBERON:0003894!9.76e-12!22;UBERON:0009854!3.62e-11!23;UBERON:0009497!3.64e-10!25;UBERON:0000015!3.64e-10!25;UBERON:0002423!3.64e-10!25;UBERON:0006235!3.64e-10!25;UBERON:0004161!3.64e-10!25;UBERON:0000949!2.01e-09!45;UBERON:0002368!1.69e-08!35;UBERON:0005911!2.00e-08!82;UBERON:0002107!5.93e-08!19;UBERON:0006925!5.93e-08!19;UBERON:0008836!5.93e-08!19;UBERON:0001041!1.06e-07!98;UBERON:0003929!1.57e-07!54;UBERON:0005057!1.60e-07!26;UBERON:0000077!1.69e-07!130|ontology_enrichment_uberon_v019=UBERON:0004913;1.11e-25;1!UBERON:0003703;1.11e-25;1!UBERON:0001174;1.11e-25;1!UBERON:0004914;1.11e-25;1!UBERON:0002423;6.23e-25;25!UBERON:0002107;2.58e-21;19!UBERON:0006925;2.58e-21;19!UBERON:0002365;3.87e-13;31!UBERON:0002330;3.87e-13;31!UBERON:0002368;3.91e-13;33!UBERON:0002114;1.74e-09;2!UBERON:0000949;8.78e-09;43!UBERON:0002394;1.98e-07;4!UBERON:0003928;1.98e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0008835,2.77e-28,22;UBERON:0003894,2.77e-28,22;UBERON:0009854,4.49e-27,23;UBERON:0004913,9.79e-26,1;UBERON:0003703,9.79e-26,1;UBERON:0001174,9.79e-26,1;UBERON:0004914,9.79e-26,1;UBERON:0007499,6.08e-25,25;UBERON:0009497,6.08e-25,25;UBERON:0000015,6.08e-25,25;UBERON:0002423,6.08e-25,25;UBERON:0006235,6.08e-25,25;UBERON:0004161,6.08e-25,25;UBERON:0009856,5.33e-24,26;UBERON:0002107,2.58e-21,19;UBERON:0006925,2.58e-21,19;UBERON:0008836,2.58e-21,19;UBERON:0002365,2.88e-13,31;UBERON:0002330,2.88e-13,31;UBERON:0002368,8.37e-12,35;UBERON:0003929,1.01e-11,54;UBERON:0002114,1.67e-09,2;UBERON:0000949,2.83e-09,45;UBERON:0005172,8.61e-08,54;UBERON:0005173,8.61e-08,54;UBERON:0005911,8.69e-08,82;UBERON:0001041,2.39e-07,87;UBERON:0002530,3.68e-07,59;UBERON:0002417,4.78e-07,60;UBERON:0000916,4.78e-07,60|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0.535081656179426,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,2.94848165003288,19.4960669204863,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.72807587357917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87249745670488,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,2.65013777824443,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,1.92212912082159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.609589624911347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0|short_description=p@chr12:21305486..21305488,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr12:21305486..21305488,+ | |||
|id=chr12:21305486..21305488,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.48e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.41e-19,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!1.02e-09!2;DOID:4074!1.72e-09!2;DOID:4905!1.72e-09!2;DOID:3498!1.72e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:4929;1.46e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.37e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0007499!8.12e-13!25;UBERON:0009856!2.93e-12!26;UBERON:0008835!9.76e-12!22;UBERON:0003894!9.76e-12!22;UBERON:0009854!3.62e-11!23;UBERON:0009497!3.64e-10!25;UBERON:0000015!3.64e-10!25;UBERON:0002423!3.64e-10!25;UBERON:0006235!3.64e-10!25;UBERON:0004161!3.64e-10!25;UBERON:0000949!2.01e-09!45;UBERON:0002368!1.69e-08!35;UBERON:0005911!2.00e-08!82;UBERON:0002107!5.93e-08!19;UBERON:0006925!5.93e-08!19;UBERON:0008836!5.93e-08!19;UBERON:0001041!1.06e-07!98;UBERON:0003929!1.57e-07!54;UBERON:0005057!1.60e-07!26;UBERON:0000077!1.69e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.11e-25;1!UBERON:0003703;1.11e-25;1!UBERON:0001174;1.11e-25;1!UBERON:0004914;1.11e-25;1!UBERON:0002423;6.23e-25;25!UBERON:0002107;2.58e-21;19!UBERON:0006925;2.58e-21;19!UBERON:0002365;3.87e-13;31!UBERON:0002330;3.87e-13;31!UBERON:0002368;3.91e-13;33!UBERON:0002114;1.74e-09;2!UBERON:0000949;8.78e-09;43!UBERON:0002394;1.98e-07;4!UBERON:0003928;1.98e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,2.77e-28,22;UBERON:0003894,2.77e-28,22;UBERON:0009854,4.49e-27,23;UBERON:0004913,9.79e-26,1;UBERON:0003703,9.79e-26,1;UBERON:0001174,9.79e-26,1;UBERON:0004914,9.79e-26,1;UBERON:0007499,6.08e-25,25;UBERON:0009497,6.08e-25,25;UBERON:0000015,6.08e-25,25;UBERON:0002423,6.08e-25,25;UBERON:0006235,6.08e-25,25;UBERON:0004161,6.08e-25,25;UBERON:0009856,5.33e-24,26;UBERON:0002107,2.58e-21,19;UBERON:0006925,2.58e-21,19;UBERON:0008836,2.58e-21,19;UBERON:0002365,2.88e-13,31;UBERON:0002330,2.88e-13,31;UBERON:0002368,8.37e-12,35;UBERON:0003929,1.01e-11,54;UBERON:0002114,1.67e-09,2;UBERON:0000949,2.83e-09,45;UBERON:0005172,8.61e-08,54;UBERON:0005173,8.61e-08,54;UBERON:0005911,8.69e-08,82;UBERON:0001041,2.39e-07,87;UBERON:0002530,3.68e-07,59;UBERON:0002417,4.78e-07,60;UBERON:0000916,4.78e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0.535081656179426,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,2.94848165003288,19.4960669204863,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.72807587357917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87249745670488,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,2.65013777824443,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,1.92212912082159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.609589624911347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr12:21305486..21305488,+ | |||
}} |
Revision as of 22:07, 10 September 2013
Short description: | p@chr12:21305486..21305488, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:21305486..21305488, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.41e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 2.77e-28 | 22 |
liver primordium | 2.77e-28 | 22 |
digestive tract diverticulum | 4.49e-27 | 23 |
hepatopancreatic ampulla | 9.79e-26 | 1 |
extrahepatic bile duct | 9.79e-26 | 1 |
common bile duct | 9.79e-26 | 1 |
duodenal papilla | 9.79e-26 | 1 |
epithelial sac | 6.08e-25 | 25 |
epithelium of foregut-midgut junction | 6.08e-25 | 25 |
anatomical boundary | 6.08e-25 | 25 |
hepatobiliary system | 6.08e-25 | 25 |
foregut-midgut junction | 6.08e-25 | 25 |
septum transversum | 6.08e-25 | 25 |
sac | 5.33e-24 | 26 |
liver | 2.58e-21 | 19 |
digestive gland | 2.58e-21 | 19 |
liver bud | 2.58e-21 | 19 |
exocrine gland | 2.88e-13 | 31 |
exocrine system | 2.88e-13 | 31 |
endocrine gland | 8.37e-12 | 35 |
gut epithelium | 1.01e-11 | 54 |
duodenum | 1.67e-09 | 2 |
endocrine system | 2.83e-09 | 45 |
abdomen element | 8.61e-08 | 54 |
abdominal segment element | 8.61e-08 | 54 |
endo-epithelium | 8.69e-08 | 82 |
foregut | 2.39e-07 | 87 |
gland | 3.68e-07 | 59 |
abdominal segment of trunk | 4.78e-07 | 60 |
abdomen | 4.78e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.37e-13 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.