FFCP PHASE1:Hg19::chr11:34664014..34664045,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26298|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3246|TSSclassifier=S|UniProt=E9PPS9|association_with_transcript=-128bp_to_ENST00000527935_5end|description=CAGE_peak_4_at_EHF_5end|id=chr11:34664014..34664045,+|ontology_enrichment_celltype=CL:0002251!7.51e-15!21;CL:0002076!2.86e-11!43;CL:0000223!3.09e-11!59;CL:0000066!2.20e-07!254;CL:0002623!6.32e-07!3;CL:0002178!6.98e-07!3|ontology_enrichment_celltype_v019=CL:0002623;7.46e-08;3|ontology_enrichment_celltype_v019_2=CL:0002623,7.46e-08,3;CL:0000066,7.33e-07,253|ontology_enrichment_development_v019=UBERON:0008947;6.03e-20;29!UBERON:0006595;2.10e-07;86|ontology_enrichment_disease=DOID:305!3.41e-21!106;DOID:0050687!1.23e-12!143;DOID:299!1.92e-12!25|ontology_enrichment_disease_v019=DOID:299;4.06e-07;25|ontology_enrichment_disease_v019_2=DOID:305,2.41e-17,106;DOID:0050687,1.13e-11,143;DOID:299,3.81e-07,25|ontology_enrichment_uberon=UBERON:0001007!2.75e-21!155;UBERON:0001555!2.75e-21!155;UBERON:0007026!2.75e-21!155;UBERON:0004921!6.24e-19!129;UBERON:0004185!6.24e-19!129;UBERON:0001737!9.91e-19!9;UBERON:0004119!2.71e-18!169;UBERON:0000925!2.71e-18!169;UBERON:0006595!2.71e-18!169;UBERON:0000481!1.48e-12!347;UBERON:0000077!2.50e-12!130;UBERON:0001557!2.30e-11!19;UBERON:0007023!2.54e-11!115;UBERON:0005409!4.48e-11!35;UBERON:0000062!5.10e-11!511;UBERON:0000160!6.24e-10!27;UBERON:0001041!2.28e-09!98;UBERON:0001004!1.56e-08!72;UBERON:0000063!1.80e-07!97;UBERON:0000072!1.87e-07!46;UBERON:0008947!2.01e-07!38;UBERON:0003258!2.01e-07!38;UBERON:0000161!3.45e-07!35|ontology_enrichment_uberon_v019=UBERON:0001737;8.63e-47;9!UBERON:0001557;8.63e-47;9!UBERON:0000160;1.90e-18;17!UBERON:0005409;6.61e-18;22!UBERON:0004921;6.46e-15;33!UBERON:0000072;1.00e-13;37!UBERON:0000065;1.44e-11;44!UBERON:0002108;9.06e-11;4!UBERON:0001155;7.01e-10;9!UBERON:0000059;4.27e-08;11!UBERON:0001004;8.74e-08;65!UBERON:0006947;1.02e-07;3!UBERON:0004054;1.02e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.19e-46,9;UBERON:0001557,3.21e-26,19;UBERON:0004921,1.25e-22,118;UBERON:0001007,4.43e-19,145;UBERON:0001555,4.43e-19,145;UBERON:0007026,4.43e-19,145;UBERON:0000160,1.84e-18,17;UBERON:0004119,8.83e-17,160;UBERON:0000925,8.83e-17,160;UBERON:0006595,8.83e-17,160;UBERON:0005409,1.19e-15,25;UBERON:0008947,1.06e-14,38;UBERON:0003258,1.06e-14,38;UBERON:0000072,9.87e-14,47;UBERON:0001041,4.63e-12,87;UBERON:0000065,1.20e-11,54;UBERON:0001004,5.87e-11,74;UBERON:0002108,8.50e-11,4;UBERON:0011216,2.43e-10,223;UBERON:0001155,7.17e-10,9;UBERON:0000059,4.35e-08,11;UBERON:0006947,1.13e-07,3;UBERON:0004054,1.13e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,3.785817601275,2.69735504124963,3.37415441836875,5.07352274569012,4.13970943775572,2.13543557199987,4.31460186112526,3.33576490713088,3.46272441251751,0,0,0,0,0,0,0,0,4.5505722260952,0.171567810298526,0,0,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8071081061233,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0.16480387422676,0.211125408127993,0,2.21027132424918,0,0,0,0,0,0.895105873378046,0,0.394573622547734,0,0,0,0,0,0.520855522170466,0,0.724999575434793,1.137934482855,0,1.41832609060762,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,3.98104772431402,8.75729888583058,6.11030144933625,0,0,0,0.067401132980677,0,0,0,0,9.46843480182962,2.36750641709634,4.83962864194656,0,0,0,0,0,0,0,0,0,0,2.95051555169723,0.0979923974143777,0,0.17472666824203,0,0,0,0.164230914106418,0.193978032976839,0,0,0,0,0.379864775735272,0.782205530939212,0,1.70762395791482,0.599428828746391,4.03453168031497,0,0,0.14405479798815,0,0.942776138467182,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,8.2679084472389,0,0,0,0,0,0,0,0,0.0607495566580247,0.670869375198532,7.88057072991982,2.57027481861491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,1.71086837884329,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26298 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3246 | |||
|TSSclassifier=S | |||
|UniProt=E9PPS9 | |||
|association_with_transcript=-128bp_to_ENST00000527935_5end | |||
|description=CAGE_peak_4_at_EHF_5end | |||
|id=chr11:34664014..34664045,+ | |||
|ontology_enrichment_celltype=CL:0002251!7.51e-15!21;CL:0002076!2.86e-11!43;CL:0000223!3.09e-11!59;CL:0000066!2.20e-07!254;CL:0002623!6.32e-07!3;CL:0002178!6.98e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002623;7.46e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,7.46e-08,3;CL:0000066,7.33e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.03e-20;29!UBERON:0006595;2.10e-07;86 | |||
|ontology_enrichment_disease=DOID:305!3.41e-21!106;DOID:0050687!1.23e-12!143;DOID:299!1.92e-12!25 | |||
|ontology_enrichment_disease_v019=DOID:299;4.06e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.41e-17,106;DOID:0050687,1.13e-11,143;DOID:299,3.81e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0001007!2.75e-21!155;UBERON:0001555!2.75e-21!155;UBERON:0007026!2.75e-21!155;UBERON:0004921!6.24e-19!129;UBERON:0004185!6.24e-19!129;UBERON:0001737!9.91e-19!9;UBERON:0004119!2.71e-18!169;UBERON:0000925!2.71e-18!169;UBERON:0006595!2.71e-18!169;UBERON:0000481!1.48e-12!347;UBERON:0000077!2.50e-12!130;UBERON:0001557!2.30e-11!19;UBERON:0007023!2.54e-11!115;UBERON:0005409!4.48e-11!35;UBERON:0000062!5.10e-11!511;UBERON:0000160!6.24e-10!27;UBERON:0001041!2.28e-09!98;UBERON:0001004!1.56e-08!72;UBERON:0000063!1.80e-07!97;UBERON:0000072!1.87e-07!46;UBERON:0008947!2.01e-07!38;UBERON:0003258!2.01e-07!38;UBERON:0000161!3.45e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.63e-47;9!UBERON:0001557;8.63e-47;9!UBERON:0000160;1.90e-18;17!UBERON:0005409;6.61e-18;22!UBERON:0004921;6.46e-15;33!UBERON:0000072;1.00e-13;37!UBERON:0000065;1.44e-11;44!UBERON:0002108;9.06e-11;4!UBERON:0001155;7.01e-10;9!UBERON:0000059;4.27e-08;11!UBERON:0001004;8.74e-08;65!UBERON:0006947;1.02e-07;3!UBERON:0004054;1.02e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.19e-46,9;UBERON:0001557,3.21e-26,19;UBERON:0004921,1.25e-22,118;UBERON:0001007,4.43e-19,145;UBERON:0001555,4.43e-19,145;UBERON:0007026,4.43e-19,145;UBERON:0000160,1.84e-18,17;UBERON:0004119,8.83e-17,160;UBERON:0000925,8.83e-17,160;UBERON:0006595,8.83e-17,160;UBERON:0005409,1.19e-15,25;UBERON:0008947,1.06e-14,38;UBERON:0003258,1.06e-14,38;UBERON:0000072,9.87e-14,47;UBERON:0001041,4.63e-12,87;UBERON:0000065,1.20e-11,54;UBERON:0001004,5.87e-11,74;UBERON:0002108,8.50e-11,4;UBERON:0011216,2.43e-10,223;UBERON:0001155,7.17e-10,9;UBERON:0000059,4.35e-08,11;UBERON:0006947,1.13e-07,3;UBERON:0004054,1.13e-07,3 | |||
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|short_description=p4@EHF | |||
}} |
Revision as of 17:33, 10 September 2013
Short description: | p4@EHF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_EHF_5end |
Coexpression cluster: | NA |
Association with transcript: | -128bp_to_ENST00000527935_5end |
EntrezGene: | EHF |
HGNC: | 3246 |
UniProt: | E9PPS9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 7.46e-08 | 3 |
epithelial cell | 7.33e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.19e-46 | 9 |
upper respiratory tract | 3.21e-26 | 19 |
subdivision of digestive tract | 1.25e-22 | 118 |
digestive system | 4.43e-19 | 145 |
digestive tract | 4.43e-19 | 145 |
primitive gut | 4.43e-19 | 145 |
intestine | 1.84e-18 | 17 |
endoderm-derived structure | 8.83e-17 | 160 |
endoderm | 8.83e-17 | 160 |
presumptive endoderm | 8.83e-17 | 160 |
gastrointestinal system | 1.19e-15 | 25 |
respiratory primordium | 1.06e-14 | 38 |
endoderm of foregut | 1.06e-14 | 38 |
segment of respiratory tract | 9.87e-14 | 47 |
foregut | 4.63e-12 | 87 |
respiratory tract | 1.20e-11 | 54 |
respiratory system | 5.87e-11 | 74 |
small intestine | 8.50e-11 | 4 |
organ system subdivision | 2.43e-10 | 223 |
colon | 7.17e-10 | 9 |
large intestine | 4.35e-08 | 11 |
male genital duct | 1.13e-07 | 3 |
internal male genitalia | 1.13e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.41e-17 | 106 |
cell type cancer | 1.13e-11 | 143 |
adenocarcinoma | 3.81e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.