FFCP PHASE1:Hg19::chr11:2156713..2156749,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3481|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=5466|TSSclassifier=S|UniProt=P01344|association_with_transcript=3bp_to_AB528666,BT007013,CU674260,DQ892721,DQ895970_5end|coexpression_cluster_id=C172|description=CAGE_peak_37_at_IGF2_5end|id=chr11:2156713..2156749,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;3.99e-24;19!CL:0002541;5.40e-08;3!CL:0002537;1.11e-07;5!CL:0002577;1.66e-07;3!CL:0002564;3.50e-07;3|ontology_enrichment_celltype_v019_2=CL:0000349,3.81e-24,19;CL:0002541,5.54e-08,3;CL:0002577,1.28e-07,3;CL:0002537,1.49e-07,5;CL:0002564,3.06e-07,3|ontology_enrichment_development_v019=UBERON:0003104;1.13e-07;31!UBERON:0004161;3.82e-07;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.41e-14!14;UBERON:0000158!1.41e-14!14;UBERON:0000478!9.45e-12!24;UBERON:0000481!1.79e-09!347;UBERON:0003124!2.28e-08!7;UBERON:0000305!7.79e-08!7;UBERON:0005256!2.61e-07!143;UBERON:0000468!3.31e-07!659;UBERON:0002107!4.80e-07!19;UBERON:0006925!4.80e-07!19;UBERON:0008836!4.80e-07!19|ontology_enrichment_uberon_v019=UBERON:0000478;1.06e-23;24!UBERON:0005631;4.68e-18;10!UBERON:0000158;4.68e-18;10!UBERON:0000305;7.29e-12;7!UBERON:0002107;7.69e-12;19!UBERON:0006925;7.69e-12;19!UBERON:0001987;1.63e-09;4!UBERON:0002423;2.19e-08;25!UBERON:0003124;5.40e-08;3!UBERON:0000920;5.40e-08;3!UBERON:0000160;1.15e-07;17!UBERON:0000922;1.55e-07;49!UBERON:0002368;1.70e-07;33!UBERON:0002242;3.50e-07;3!UBERON:0005409;3.88e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.26e-26,14;UBERON:0000158,8.26e-26,14;UBERON:0000478,1.01e-23,24;UBERON:0003124,6.27e-16,7;UBERON:0002107,8.83e-12,19;UBERON:0006925,8.83e-12,19;UBERON:0008836,8.83e-12,19;UBERON:0000305,1.02e-11,7;UBERON:0004871,3.87e-10,8;UBERON:0008835,8.01e-10,22;UBERON:0003894,8.01e-10,22;UBERON:0001987,1.24e-09,4;UBERON:0004340,1.24e-09,4;UBERON:0009854,2.76e-09,23;UBERON:0007499,2.41e-08,25;UBERON:0009497,2.41e-08,25;UBERON:0000015,2.41e-08,25;UBERON:0002423,2.41e-08,25;UBERON:0006235,2.41e-08,25;UBERON:0004161,2.41e-08,25;UBERON:0000920,5.54e-08,3;UBERON:0009856,6.28e-08,26;UBERON:0000160,1.25e-07,17;UBERON:0002368,1.67e-07,35;UBERON:0002242,3.06e-07,3;UBERON:0003068,3.06e-07,3;UBERON:0002328,3.06e-07,3;UBERON:0004880,3.06e-07,3;UBERON:0004119,4.81e-07,160;UBERON:0000925,4.81e-07,160;UBERON:0006595,4.81e-07,160|phase1_expression=0.54503513781167,0.428201047781966,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,17.4753097704138,19.5187563889056,0.37129905888014,0.994192127183747,0,0,0,0,0.123121058076788,1.22400414746552,1.25381888591235,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0.973269740605272,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,1.96764655938411,1.15235184896,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,1.7308685049499,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0.813357600086629,0.207322110030741,0,0,0,0,0,4.64367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88034845542168,5.07020139287323,0.982827216677626,1.77236972004421,0,8.73217913656106,0,0,0,0,0.277765335475589,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1798003441664,0.07333828582095,0,0,0,0.531876233169741,1.04007436911366,0.514414748524284,1.41849132023278,0.266422179016099,1.42977993658148,32.5572963234866,1.64648067356154,0,1.06617584622764,2.37585561880029,0,0,0,0,0,0,0,0,0,0.579125226670317,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,3.18997878469764,2.50085260529839,2.44138521329762,1.87173775377726,2.67643483195743,0.630809660135739,3.5142424497814,0.601892199455438,0,2.0694614258501,0,0.184369168541703,0,28.5869689895601,39.1183503144376,0,0,0,1.81876542867756,14.9791895559447,14.5147340798247,0,0.153461973288062,0.280660094433074,0,0,0.482561763430822,0,0,0,0,0,0,10.0313343161046,0,0,0.114814448164607,0,0.655622074797121,0,0.231046011313244,0,0,0,0,0.170093705276516,0.863663664408557,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0,0,0,1.23649213977267,0.0915694648183434,0,0,0,0,0.193341436584244,0.154048617114644,0.307007349452259,0.551346289938122,0.107420244868274,0.145016693914229,0.426133137080504,7.12256285173899,0.330569830721956,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0.869932992075073,0,0,0.744316738719335,2.21465597303108,0.953150969619124,0.255897791311334,5.135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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5466 | |||
|TSSclassifier=S | |||
|UniProt=P01344 | |||
|association_with_transcript=3bp_to_AB528666,BT007013,CU674260,DQ892721,DQ895970_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_37_at_IGF2_5end | |||
|id=chr11:2156713..2156749,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.99e-24;19!CL:0002541;5.40e-08;3!CL:0002537;1.11e-07;5!CL:0002577;1.66e-07;3!CL:0002564;3.50e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.81e-24,19;CL:0002541,5.54e-08,3;CL:0002577,1.28e-07,3;CL:0002537,1.49e-07,5;CL:0002564,3.06e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.13e-07;31!UBERON:0004161;3.82e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.41e-14!14;UBERON:0000158!1.41e-14!14;UBERON:0000478!9.45e-12!24;UBERON:0000481!1.79e-09!347;UBERON:0003124!2.28e-08!7;UBERON:0000305!7.79e-08!7;UBERON:0005256!2.61e-07!143;UBERON:0000468!3.31e-07!659;UBERON:0002107!4.80e-07!19;UBERON:0006925!4.80e-07!19;UBERON:0008836!4.80e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.06e-23;24!UBERON:0005631;4.68e-18;10!UBERON:0000158;4.68e-18;10!UBERON:0000305;7.29e-12;7!UBERON:0002107;7.69e-12;19!UBERON:0006925;7.69e-12;19!UBERON:0001987;1.63e-09;4!UBERON:0002423;2.19e-08;25!UBERON:0003124;5.40e-08;3!UBERON:0000920;5.40e-08;3!UBERON:0000160;1.15e-07;17!UBERON:0000922;1.55e-07;49!UBERON:0002368;1.70e-07;33!UBERON:0002242;3.50e-07;3!UBERON:0005409;3.88e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.26e-26,14;UBERON:0000158,8.26e-26,14;UBERON:0000478,1.01e-23,24;UBERON:0003124,6.27e-16,7;UBERON:0002107,8.83e-12,19;UBERON:0006925,8.83e-12,19;UBERON:0008836,8.83e-12,19;UBERON:0000305,1.02e-11,7;UBERON:0004871,3.87e-10,8;UBERON:0008835,8.01e-10,22;UBERON:0003894,8.01e-10,22;UBERON:0001987,1.24e-09,4;UBERON:0004340,1.24e-09,4;UBERON:0009854,2.76e-09,23;UBERON:0007499,2.41e-08,25;UBERON:0009497,2.41e-08,25;UBERON:0000015,2.41e-08,25;UBERON:0002423,2.41e-08,25;UBERON:0006235,2.41e-08,25;UBERON:0004161,2.41e-08,25;UBERON:0000920,5.54e-08,3;UBERON:0009856,6.28e-08,26;UBERON:0000160,1.25e-07,17;UBERON:0002368,1.67e-07,35;UBERON:0002242,3.06e-07,3;UBERON:0003068,3.06e-07,3;UBERON:0002328,3.06e-07,3;UBERON:0004880,3.06e-07,3;UBERON:0004119,4.81e-07,160;UBERON:0000925,4.81e-07,160;UBERON:0006595,4.81e-07,160 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,17.4753097704138,19.5187563889056,0.37129905888014,0.994192127183747,0,0,0,0,0.123121058076788,1.22400414746552,1.25381888591235,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0.973269740605272,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,1.96764655938411,1.15235184896,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,1.7308685049499,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0.813357600086629,0.207322110030741,0,0,0,0,0,4.64367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88034845542168,5.07020139287323,0.982827216677626,1.77236972004421,0,8.73217913656106,0,0,0,0,0.277765335475589,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1798003441664,0.07333828582095,0,0,0,0.531876233169741,1.04007436911366,0.514414748524284,1.41849132023278,0.266422179016099,1.42977993658148,32.5572963234866,1.64648067356154,0,1.06617584622764,2.37585561880029,0,0,0,0,0,0,0,0,0,0.579125226670317,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,3.18997878469764,2.50085260529839,2.44138521329762,1.87173775377726,2.67643483195743,0.630809660135739,3.5142424497814,0.601892199455438,0,2.0694614258501,0,0.184369168541703,0,28.5869689895601,39.1183503144376,0,0,0,1.81876542867756,14.9791895559447,14.5147340798247,0,0.153461973288062,0.280660094433074,0,0,0.482561763430822,0,0,0,0,0,0,10.0313343161046,0,0,0.114814448164607,0,0.655622074797121,0,0.231046011313244,0,0,0,0,0.170093705276516,0.863663664408557,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0,0,0,1.23649213977267,0.0915694648183434,0,0,0,0,0.193341436584244,0.154048617114644,0.307007349452259,0.551346289938122,0.107420244868274,0.145016693914229,0.426133137080504,7.12256285173899,0.330569830721956,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0.869932992075073,0,0,0.744316738719335,2.21465597303108,0.953150969619124,0.255897791311334,5.13526785640705,0,0,0.899362287916574,1.09814811894422,0.117812402345686,0,0,0,0.48763373908959,0,0,1.09199929126389,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.491245205065606,0,0,0,0,0.379473173765715,0.699869440489966,0,0,0,1.60044461320525,0.86101074534246,0,1.7737206141467,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,18.1445808400644,7.12715233998333,26.1086596784347,0,0,0,0,0.63337622438398,0.597743964753209,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.278304294485554,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0.87754158861589,0,0,0.615602068030377,0,2.07507513949254,0,0,32.8571194523877,2.28993983504656,82.0873555068697,0,0,0,0,0,0,0,0,0,0,1.13082457147153,0,0,0.176915129006678,1.83309043480088,0,0,0,0.202203398942031,17.6567082405734,0.234264445725339,0,0,0,0,9.67925728389311,0.61214552326098,1.89559738885464,0,0,0,0,0.313932918407225,0,0,0,0,0,0,1.92199335066233,0,0,0,0,0.193978032976839,0.0882561266915003,1.12990370390266,0,0,0.0633107959558787,0,0,0.213452994739353,9.19124204077799,0,0,34.6621895681168,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0.798716001995964,0.429226048136571,0.223171457441873,2.35142153703542,0.360299883542404,0,8.74493323610183,8.48883341326014,10.5149528412528,6.29935881694392,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,1.62609223218494,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0.226624183040251,2.05173127149315,13.2506888912221,0.129282956361551,0,0,0,0.106787412567695,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.124192805882767,0,0.249960815924213,0,0,0.470531639396343,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,3.20022211730523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0.622077260032973,0,0,0,0.436838552768056,0,0,0,0,0,0,0,2.1160556621441,0.6124909547064,0,0,0,0.205116364240755,0.756215088665154,0.0691572524642179,0,1.42769420259154,0,0,0,0,0,0,1.19349733269765,0.376051641746286,0,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0.496211178389294,0,0,0,0.336283722218824,1.21393120847326,0,6.56397539203527,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,2.5224494698241,2.73947616152849,0,0,0.714765441766563,0,0,9.38834670433929,1.60342272946051,0,0,0,0,0,0,0.846774100381858,0.68732060563215,0,0,0,0,0.243835849964539,1.29485767437579,0.82130245484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| |||
|short_description=p37@IGF2 | |||
}} |
Revision as of 17:12, 10 September 2013
Short description: | p37@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_37_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 3bp_to_AB528666, BT007013, CU674260, DQ892721, DQ895970_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.81e-24 | 19 |
chorionic membrane mesenchymal stem cell | 5.54e-08 | 3 |
placental epithelial cell | 1.28e-07 | 3 |
amnion mesenchymal stem cell | 1.49e-07 | 5 |
nucleus pulposus cell of intervertebral disc | 3.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.26e-26 | 14 |
membranous layer | 8.26e-26 | 14 |
extraembryonic structure | 1.01e-23 | 24 |
chorion | 6.27e-16 | 7 |
liver | 8.83e-12 | 19 |
digestive gland | 8.83e-12 | 19 |
liver bud | 8.83e-12 | 19 |
amnion | 1.02e-11 | 7 |
somatic layer of lateral plate mesoderm | 3.87e-10 | 8 |
hepatic diverticulum | 8.01e-10 | 22 |
liver primordium | 8.01e-10 | 22 |
placenta | 1.24e-09 | 4 |
allantois | 1.24e-09 | 4 |
digestive tract diverticulum | 2.76e-09 | 23 |
epithelial sac | 2.41e-08 | 25 |
epithelium of foregut-midgut junction | 2.41e-08 | 25 |
anatomical boundary | 2.41e-08 | 25 |
hepatobiliary system | 2.41e-08 | 25 |
foregut-midgut junction | 2.41e-08 | 25 |
septum transversum | 2.41e-08 | 25 |
egg chorion | 5.54e-08 | 3 |
sac | 6.28e-08 | 26 |
intestine | 1.25e-07 | 17 |
endocrine gland | 1.67e-07 | 35 |
nucleus pulposus | 3.06e-07 | 3 |
axial mesoderm | 3.06e-07 | 3 |
notochord | 3.06e-07 | 3 |
chordamesoderm | 3.06e-07 | 3 |
endoderm-derived structure | 4.81e-07 | 160 |
endoderm | 4.81e-07 | 160 |
presumptive endoderm | 4.81e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.