FFCP PHASE1:Hg19::chr11:116707827..116707855,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=335|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=600|TSSclassifier=S|UniProt=P02647|association_with_transcript=3bp_to_M29068_5end|coexpression_cluster_id=C5|description=CAGE_peak_3_at_APOA1_5end|id=chr11:116707827..116707855,-|ontology_enrichment_celltype=CL:0000181!1.28e-19!12;CL:0000417!1.28e-19!12;CL:0000668!1.28e-19!12;CL:0000414!1.28e-19!12;CL:0000412!1.28e-19!12;CL:0000182!1.28e-19!12;CL:0002322!6.74e-09!5|ontology_enrichment_celltype_v019=CL:0000182;9.90e-38;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.02e-37,12;CL:0000223,5.78e-12,58|ontology_enrichment_development_v019=UBERON:0004161;2.53e-30;11!UBERON:0009497;1.29e-25;13!UBERON:0001041;6.80e-11;30!UBERON:0003104;1.39e-10;31!CL:0000223;7.34e-09;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.32e-24!19;UBERON:0006925!1.32e-24!19;UBERON:0008836!1.32e-24!19;UBERON:0008835!5.52e-21!22;UBERON:0003894!5.52e-21!22;UBERON:0009854!5.49e-20!23;UBERON:0007499!3.12e-18!25;UBERON:0009497!3.12e-18!25;UBERON:0000015!3.12e-18!25;UBERON:0002423!3.12e-18!25;UBERON:0006235!3.12e-18!25;UBERON:0004161!3.12e-18!25;UBERON:0005057!1.87e-17!26;UBERON:0009856!1.87e-17!26;UBERON:0002365!2.52e-14!31;UBERON:0002330!2.52e-14!31;UBERON:0003929!7.37e-13!54;UBERON:0002368!1.82e-12!35;UBERON:0004921!1.87e-09!129;UBERON:0004185!1.87e-09!129;UBERON:0000949!2.84e-09!45;UBERON:0003914!3.04e-09!118;UBERON:0005911!8.19e-09!82;UBERON:0005172!9.73e-09!55;UBERON:0005173!9.73e-09!55;UBERON:0002530!4.15e-08!59;UBERON:0000160!7.62e-08!27;UBERON:0002417!1.14e-07!61;UBERON:0000916!1.14e-07!61;UBERON:0004151!2.41e-07!3;UBERON:0001007!3.42e-07!155;UBERON:0001555!3.42e-07!155;UBERON:0007026!3.42e-07!155;UBERON:0003978!3.42e-07!3;UBERON:0009751!3.42e-07!3;UBERON:0000946!3.42e-07!3;UBERON:0002523!3.42e-07!3;UBERON:0005983!3.42e-07!3;UBERON:0002165!3.42e-07!3;UBERON:0002062!3.42e-07!3;UBERON:0007280!3.42e-07!3|ontology_enrichment_uberon_v019=UBERON:0002107;3.42e-48;19!UBERON:0006925;3.42e-48;19!UBERON:0002423;2.57e-36;25!UBERON:0002365;2.47e-28;31!UBERON:0002330;2.47e-28;31!UBERON:0002368;1.28e-24;33!UBERON:0000160;1.42e-18;17!UBERON:0002108;8.59e-18;4!UBERON:0000949;3.32e-17;43!UBERON:0005409;1.86e-14;22!UBERON:0001007;5.98e-14;81!UBERON:0002530;1.83e-11;57!UBERON:0005172;1.30e-10;52!UBERON:0005173;1.30e-10;52!UBERON:0002417;2.33e-09;58!UBERON:0000916;2.33e-09;58!UBERON:0004921;8.07e-09;33|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.42e-48,19;UBERON:0006925,3.42e-48,19;UBERON:0008836,3.42e-48,19;UBERON:0008835,1.90e-41,22;UBERON:0003894,1.90e-41,22;UBERON:0009854,1.37e-39,23;UBERON:0007499,2.57e-36,25;UBERON:0009497,2.57e-36,25;UBERON:0000015,2.57e-36,25;UBERON:0002423,2.57e-36,25;UBERON:0006235,2.57e-36,25;UBERON:0004161,2.57e-36,25;UBERON:0009856,7.19e-35,26;UBERON:0002365,4.97e-29,31;UBERON:0002330,4.97e-29,31;UBERON:0002368,1.48e-25,35;UBERON:0003929,2.47e-23,54;UBERON:0004921,2.28e-20,118;UBERON:0000949,1.44e-19,45;UBERON:0000160,1.44e-18,17;UBERON:0002108,8.84e-18,4;UBERON:0002530,9.80e-18,59;UBERON:0001007,4.08e-16,145;UBERON:0001555,4.08e-16,145;UBERON:0007026,4.08e-16,145;UBERON:0005172,4.52e-16,54;UBERON:0005173,4.52e-16,54;UBERON:0005911,9.77e-15,82;UBERON:0004119,2.30e-14,160;UBERON:0000925,2.30e-14,160;UBERON:0006595,2.30e-14,160;UBERON:0002417,2.55e-14,60;UBERON:0000916,2.55e-14,60;UBERON:0005409,9.74e-13,25;UBERON:0011216,9.14e-11,223;UBERON:0001041,2.01e-09,87;UBERON:0005177,6.50e-08,101;UBERON:0005256,1.04e-07,122;UBERON:0000490,2.56e-07,148;UBERON:0009569,5.43e-07,112|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,39.2940607947676,54.0554969172694,84.4829566554408,0,6.64137568132813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6025071607957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,92.5308284596546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,97.1564024016361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=600 | |||
|TSSclassifier=S | |||
|UniProt=P02647 | |||
|association_with_transcript=3bp_to_M29068_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_APOA1_5end | |||
|id=chr11:116707827..116707855,- | |||
|ontology_enrichment_celltype=CL:0000181!1.28e-19!12;CL:0000417!1.28e-19!12;CL:0000668!1.28e-19!12;CL:0000414!1.28e-19!12;CL:0000412!1.28e-19!12;CL:0000182!1.28e-19!12;CL:0002322!6.74e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.90e-38;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.02e-37,12;CL:0000223,5.78e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.53e-30;11!UBERON:0009497;1.29e-25;13!UBERON:0001041;6.80e-11;30!UBERON:0003104;1.39e-10;31!CL:0000223;7.34e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.32e-24!19;UBERON:0006925!1.32e-24!19;UBERON:0008836!1.32e-24!19;UBERON:0008835!5.52e-21!22;UBERON:0003894!5.52e-21!22;UBERON:0009854!5.49e-20!23;UBERON:0007499!3.12e-18!25;UBERON:0009497!3.12e-18!25;UBERON:0000015!3.12e-18!25;UBERON:0002423!3.12e-18!25;UBERON:0006235!3.12e-18!25;UBERON:0004161!3.12e-18!25;UBERON:0005057!1.87e-17!26;UBERON:0009856!1.87e-17!26;UBERON:0002365!2.52e-14!31;UBERON:0002330!2.52e-14!31;UBERON:0003929!7.37e-13!54;UBERON:0002368!1.82e-12!35;UBERON:0004921!1.87e-09!129;UBERON:0004185!1.87e-09!129;UBERON:0000949!2.84e-09!45;UBERON:0003914!3.04e-09!118;UBERON:0005911!8.19e-09!82;UBERON:0005172!9.73e-09!55;UBERON:0005173!9.73e-09!55;UBERON:0002530!4.15e-08!59;UBERON:0000160!7.62e-08!27;UBERON:0002417!1.14e-07!61;UBERON:0000916!1.14e-07!61;UBERON:0004151!2.41e-07!3;UBERON:0001007!3.42e-07!155;UBERON:0001555!3.42e-07!155;UBERON:0007026!3.42e-07!155;UBERON:0003978!3.42e-07!3;UBERON:0009751!3.42e-07!3;UBERON:0000946!3.42e-07!3;UBERON:0002523!3.42e-07!3;UBERON:0005983!3.42e-07!3;UBERON:0002165!3.42e-07!3;UBERON:0002062!3.42e-07!3;UBERON:0007280!3.42e-07!3 | |||
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|short_description=p3@APOA1 | |||
}} |
Revision as of 15:53, 10 September 2013
Short description: | p3@APOA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_APOA1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 3bp_to_M29068_5end |
EntrezGene: | APOA1 |
HGNC: | 600 |
UniProt: | P02647 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.02e-37 | 12 |
endodermal cell | 5.78e-12 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.