FFCP PHASE1:Hg19::chr14:57272369..57272391,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002322!6.02e-17!5;CL:0000039!8.78e-16!7;CL:0000586!8.78e-16!7;CL:0000540!1.18e-13!6;CL:0000031!1.18e-13!6;CL:0000404!1.18e-13!6;CL:0002586!7.54e-11!3;CL:0000047!3.84e-10!8;CL:0000133!1.41e-09!59;CL:0000149!3.19e-08!4;CL:0002319!3.84e-08!25;CL:0000147!4.47e-08!14;CL:0000221!2.13e-07!71 | |ontology_enrichment_celltype=CL:0002322!6.02e-17!5;CL:0000039!8.78e-16!7;CL:0000586!8.78e-16!7;CL:0000540!1.18e-13!6;CL:0000031!1.18e-13!6;CL:0000404!1.18e-13!6;CL:0002586!7.54e-11!3;CL:0000047!3.84e-10!8;CL:0000133!1.41e-09!59;CL:0000149!3.19e-08!4;CL:0002319!3.84e-08!25;CL:0000147!4.47e-08!14;CL:0000221!2.13e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.47e-28;5!CL:0002586;7.71e-18;3!CL:0002321;1.12e-17;15!CL:0000147;3.58e-14;14!CL:0000149;1.63e-13;4!CL:0000039;7.71e-13;7!CL:0000586;7.71e-13;7!CL:0000540;2.19e-09;6!CL:0000404;2.19e-09;6 | |ontology_enrichment_celltype_v019=CL:0002322;1.47e-28;5!CL:0002586;7.71e-18;3!CL:0002321;1.12e-17;15!CL:0000147;3.58e-14;14!CL:0000149;1.63e-13;4!CL:0000039;7.71e-13;7!CL:0000586;7.71e-13;7!CL:0000540;2.19e-09;6!CL:0000404;2.19e-09;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.47e-28,5;CL:0002586,7.71e-18,3;CL:0000147,3.58e-14,14;CL:0000149,1.63e-13,4;CL:0000039,8.34e-13,7;CL:0000586,8.34e-13,7;CL:0000540,2.19e-09,6;CL:0000031,2.19e-09,6;CL:0000404,2.19e-09,6;CL:0000133,1.24e-07,59;CL:0000047,3.85e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.07e-14;10!UBERON:0005564;9.07e-14;10!CL:0000031;2.19e-09;6!UBERON:0003056;1.51e-08;3 | |ontology_enrichment_development_v019=UBERON:0009117;9.07e-14;10!UBERON:0005564;9.07e-14;10!CL:0000031;2.19e-09;6!UBERON:0003056;1.51e-08;3 | ||
|ontology_enrichment_disease=DOID:3095!4.68e-25!22;DOID:2994!4.68e-25!22;DOID:171!1.20e-07!10 | |ontology_enrichment_disease=DOID:3095!4.68e-25!22;DOID:2994!4.68e-25!22;DOID:171!1.20e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.49e-23;22!DOID:2994;2.49e-23;22 | |ontology_enrichment_disease_v019=DOID:3095;2.49e-23;22!DOID:2994;2.49e-23;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,2.65e-23,22;DOID:2994,2.65e-23,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.11e-24!94;UBERON:0001016!1.11e-24!94;UBERON:0005743!4.69e-24!86;UBERON:0002346!1.20e-20!90;UBERON:0001017!4.75e-18!82;UBERON:0003075!6.00e-17!86;UBERON:0007284!6.00e-17!86;UBERON:0000966!6.63e-17!5;UBERON:0005388!6.63e-17!5;UBERON:0001802!6.63e-17!5;UBERON:0000924!7.76e-16!173;UBERON:0006601!7.76e-16!173;UBERON:0004121!3.48e-13!169;UBERON:0002298!8.81e-13!8;UBERON:0003076!2.04e-11!15;UBERON:0003057!2.04e-11!15;UBERON:0000970!2.18e-11!20;UBERON:0004733!3.27e-11!12;UBERON:0002028!3.27e-11!12;UBERON:0007277!3.27e-11!12;UBERON:0001781!7.54e-11!3;UBERON:0001782!7.54e-11!3;UBERON:0005424!7.54e-11!3;UBERON:0002104!9.22e-11!21;UBERON:0001049!9.94e-11!57;UBERON:0005068!9.94e-11!57;UBERON:0006241!9.94e-11!57;UBERON:0007135!9.94e-11!57;UBERON:0000955!1.03e-10!69;UBERON:0006238!1.03e-10!69;UBERON:0004732!2.84e-10!13;UBERON:0003056!2.93e-10!61;UBERON:0002616!2.95e-10!59;UBERON:0000153!4.41e-10!129;UBERON:0007811!4.41e-10!129;UBERON:0000033!6.27e-10!123;UBERON:0007625!8.22e-10!11;UBERON:0000473!1.01e-09!8;UBERON:0000020!1.13e-09!23;UBERON:0001896!1.27e-09!3;UBERON:0005290!1.27e-09!3;UBERON:0010096!1.27e-09!3;UBERON:0000019!1.57e-09!19;UBERON:0000047!1.57e-09!19;UBERON:0004088!1.57e-09!19;UBERON:0003072!1.57e-09!19;UBERON:0003071!1.57e-09!19;UBERON:0004128!1.57e-09!19;UBERON:0001032!3.38e-09!24;UBERON:0004456!3.38e-09!24;UBERON:0001456!1.73e-08!21;UBERON:0001905!6.46e-08!2;UBERON:0002757!6.46e-08!2;UBERON:0010134!6.46e-08!2;UBERON:0002784!6.46e-08!2;UBERON:0005408!6.46e-08!2;UBERON:0001899!6.46e-08!2;UBERON:0001894!1.70e-07!7;UBERON:0006222!1.70e-07!7;UBERON:0003135!5.72e-07!11 | |ontology_enrichment_uberon=UBERON:0000073!1.11e-24!94;UBERON:0001016!1.11e-24!94;UBERON:0005743!4.69e-24!86;UBERON:0002346!1.20e-20!90;UBERON:0001017!4.75e-18!82;UBERON:0003075!6.00e-17!86;UBERON:0007284!6.00e-17!86;UBERON:0000966!6.63e-17!5;UBERON:0005388!6.63e-17!5;UBERON:0001802!6.63e-17!5;UBERON:0000924!7.76e-16!173;UBERON:0006601!7.76e-16!173;UBERON:0004121!3.48e-13!169;UBERON:0002298!8.81e-13!8;UBERON:0003076!2.04e-11!15;UBERON:0003057!2.04e-11!15;UBERON:0000970!2.18e-11!20;UBERON:0004733!3.27e-11!12;UBERON:0002028!3.27e-11!12;UBERON:0007277!3.27e-11!12;UBERON:0001781!7.54e-11!3;UBERON:0001782!7.54e-11!3;UBERON:0005424!7.54e-11!3;UBERON:0002104!9.22e-11!21;UBERON:0001049!9.94e-11!57;UBERON:0005068!9.94e-11!57;UBERON:0006241!9.94e-11!57;UBERON:0007135!9.94e-11!57;UBERON:0000955!1.03e-10!69;UBERON:0006238!1.03e-10!69;UBERON:0004732!2.84e-10!13;UBERON:0003056!2.93e-10!61;UBERON:0002616!2.95e-10!59;UBERON:0000153!4.41e-10!129;UBERON:0007811!4.41e-10!129;UBERON:0000033!6.27e-10!123;UBERON:0007625!8.22e-10!11;UBERON:0000473!1.01e-09!8;UBERON:0000020!1.13e-09!23;UBERON:0001896!1.27e-09!3;UBERON:0005290!1.27e-09!3;UBERON:0010096!1.27e-09!3;UBERON:0000019!1.57e-09!19;UBERON:0000047!1.57e-09!19;UBERON:0004088!1.57e-09!19;UBERON:0003072!1.57e-09!19;UBERON:0003071!1.57e-09!19;UBERON:0004128!1.57e-09!19;UBERON:0001032!3.38e-09!24;UBERON:0004456!3.38e-09!24;UBERON:0001456!1.73e-08!21;UBERON:0001905!6.46e-08!2;UBERON:0002757!6.46e-08!2;UBERON:0010134!6.46e-08!2;UBERON:0002784!6.46e-08!2;UBERON:0005408!6.46e-08!2;UBERON:0001899!6.46e-08!2;UBERON:0001894!1.70e-07!7;UBERON:0006222!1.70e-07!7;UBERON:0003135!5.72e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.90e-28;5!UBERON:0005388;1.90e-28;5!UBERON:0001802;1.90e-28;5!UBERON:0001781;7.71e-18;3!UBERON:0001782;7.71e-18;3!UBERON:0000970;6.41e-13;20!UBERON:0001905;1.05e-12;2!UBERON:0002757;1.05e-12;2!UBERON:0010134;1.05e-12;2!UBERON:0005408;1.05e-12;2!UBERON:0001899;1.05e-12;2!UBERON:0002104;2.91e-12;21!UBERON:0000473;2.98e-11;8!UBERON:0000020;4.05e-11;23!UBERON:0001032;1.28e-10;24!UBERON:0004456;1.28e-10;24!UBERON:0000019;3.51e-10;19!UBERON:0000047;3.51e-10;19!UBERON:0004088;3.51e-10;19!UBERON:0010230;3.51e-10;19!UBERON:0001456;3.72e-09;21!UBERON:0007625;2.25e-08;11!UBERON:0003135;3.26e-08;11!UBERON:0001894;8.40e-08;7!UBERON:0000922;3.73e-07;49!UBERON:0003296;9.26e-07;4!UBERON:0010133;9.26e-07;4!UBERON:0002784;9.26e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000966;1.90e-28;5!UBERON:0005388;1.90e-28;5!UBERON:0001802;1.90e-28;5!UBERON:0001781;7.71e-18;3!UBERON:0001782;7.71e-18;3!UBERON:0000970;6.41e-13;20!UBERON:0001905;1.05e-12;2!UBERON:0002757;1.05e-12;2!UBERON:0010134;1.05e-12;2!UBERON:0005408;1.05e-12;2!UBERON:0001899;1.05e-12;2!UBERON:0002104;2.91e-12;21!UBERON:0000473;2.98e-11;8!UBERON:0000020;4.05e-11;23!UBERON:0001032;1.28e-10;24!UBERON:0004456;1.28e-10;24!UBERON:0000019;3.51e-10;19!UBERON:0000047;3.51e-10;19!UBERON:0004088;3.51e-10;19!UBERON:0010230;3.51e-10;19!UBERON:0001456;3.72e-09;21!UBERON:0007625;2.25e-08;11!UBERON:0003135;3.26e-08;11!UBERON:0001894;8.40e-08;7!UBERON:0000922;3.73e-07;49!UBERON:0003296;9.26e-07;4!UBERON:0010133;9.26e-07;4!UBERON:0002784;9.26e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.02e-23,6;UBERON:0005388,1.02e-23,6;UBERON:0001802,1.02e-23,6;UBERON:0001782,7.71e-18,3;UBERON:0005424,7.71e-18,3;UBERON:0001781,1.63e-13,4;UBERON:0001905,1.05e-12,2;UBERON:0002757,1.05e-12,2;UBERON:0010134,1.05e-12,2;UBERON:0005408,1.05e-12,2;UBERON:0001899,1.05e-12,2;UBERON:0000970,2.86e-12,21;UBERON:0002104,2.86e-12,21;UBERON:0000473,3.19e-11,8;UBERON:0000020,1.26e-10,24;UBERON:0001032,1.26e-10,24;UBERON:0004456,1.26e-10,24;UBERON:0000019,1.19e-09,20;UBERON:0000047,1.19e-09,20;UBERON:0010312,1.19e-09,20;UBERON:0004088,1.19e-09,20;UBERON:0010230,1.19e-09,20;UBERON:0003072,1.19e-09,20;UBERON:0004128,1.19e-09,20;UBERON:0003071,1.19e-09,20;UBERON:0001456,1.02e-08,22;UBERON:0007625,2.27e-08,11;UBERON:0003135,3.42e-08,11;UBERON:0001894,8.50e-08,7;UBERON:0006222,8.50e-08,7;UBERON:0003296,9.26e-07,4;UBERON:0010133,9.26e-07,4;UBERON:0002784,9.26e-07,4 | |||
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| ||
|short_description=p2@OTX2 | |short_description=p2@OTX2 | ||
}} | }} |
Revision as of 07:23, 21 November 2012
Short description: | p2@OTX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_OTX2_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | 0bp_to_ENST00000408990_5end |
EntrezGene: | OTX2 |
HGNC: | 8522 |
UniProt: | P32243 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.47e-28 | 5 |
retinal pigment epithelial cell | 7.71e-18 | 3 |
pigment cell | 3.58e-14 | 14 |
visual pigment cell | 1.63e-13 | 4 |
germ line cell | 8.34e-13 | 7 |
germ cell | 8.34e-13 | 7 |
neuron | 2.19e-09 | 6 |
neuroblast | 2.19e-09 | 6 |
electrically signaling cell | 2.19e-09 | 6 |
neurectodermal cell | 1.24e-07 | 59 |
neuronal stem cell | 3.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
retina | 1.02e-23 | 6 |
photoreceptor array | 1.02e-23 | 6 |
posterior segment of eyeball | 1.02e-23 | 6 |
pigmented layer of retina | 7.71e-18 | 3 |
presumptive retinal pigmented epithelium | 7.71e-18 | 3 |
layer of retina | 1.63e-13 | 4 |
pineal body | 1.05e-12 | 2 |
regional part of epithalamus | 1.05e-12 | 2 |
secretory circumventricular organ | 1.05e-12 | 2 |
circumventricular organ | 1.05e-12 | 2 |
epithalamus | 1.05e-12 | 2 |
eye | 2.86e-12 | 21 |
visual system | 2.86e-12 | 21 |
testis | 3.19e-11 | 8 |
sense organ | 1.26e-10 | 24 |
sensory system | 1.26e-10 | 24 |
entire sense organ system | 1.26e-10 | 24 |
camera-type eye | 1.19e-09 | 20 |
simple eye | 1.19e-09 | 20 |
immature eye | 1.19e-09 | 20 |
ocular region | 1.19e-09 | 20 |
eyeball of camera-type eye | 1.19e-09 | 20 |
optic cup | 1.19e-09 | 20 |
optic vesicle | 1.19e-09 | 20 |
eye primordium | 1.19e-09 | 20 |
face | 1.02e-08 | 22 |
pigment epithelium of eye | 2.27e-08 | 11 |
male reproductive organ | 3.42e-08 | 11 |
diencephalon | 8.50e-08 | 7 |
future diencephalon | 8.50e-08 | 7 |
gland of diencephalon | 9.26e-07 | 4 |
neuroendocrine gland | 9.26e-07 | 4 |
regional part of diencephalon | 9.26e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.65e-23 | 22 |
germ cell cancer | 2.65e-23 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.