FFCP PHASE1:Hg19::chr3:38032261..38032292,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002076!1.79e-16!43;CL:0002368!6.40e-16!13;CL:0000223!2.34e-11!59;CL:0002202!9.35e-10!9;CL:0002632!9.35e-10!9;CL:0000066!1.92e-09!254;CL:0000244!8.95e-08!4;CL:0000731!8.95e-08!4 | |ontology_enrichment_celltype=CL:0002076!1.79e-16!43;CL:0002368!6.40e-16!13;CL:0000223!2.34e-11!59;CL:0002202!9.35e-10!9;CL:0002632!9.35e-10!9;CL:0000066!1.92e-09!254;CL:0000244!8.95e-08!4;CL:0000731!8.95e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002368;3.45e-21;13!CL:0002202;1.25e-11;9!CL:0002632;1.25e-11;9!CL:0002328;5.08e-10;3!CL:0002076;5.86e-10;42!CL:0000244;3.35e-07;4!CL:0000731;3.35e-07;4!CL:0000575;7.67e-07;2 | |ontology_enrichment_celltype_v019=CL:0002368;3.45e-21;13!CL:0002202;1.25e-11;9!CL:0002632;1.25e-11;9!CL:0002328;5.08e-10;3!CL:0002076;5.86e-10;42!CL:0000244;3.35e-07;4!CL:0000731;3.35e-07;4!CL:0000575;7.67e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.98e-21,13;CL:0002076,1.12e-12,42;CL:0002202,1.18e-11,9;CL:0002632,1.18e-11,9;CL:0002328,6.21e-10,3;CL:0000223,3.14e-08,58;CL:0000244,2.97e-07,4;CL:0000731,2.97e-07,4;CL:0000575,9.33e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;1.50e-07;2!DOID:299;5.81e-07;25 | |ontology_enrichment_disease_v019=DOID:3493;1.50e-07;2!DOID:299;5.81e-07;25 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,1.37e-07,2;DOID:299,5.74e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.25e-24!169;UBERON:0000925!1.25e-24!169;UBERON:0006595!1.25e-24!169;UBERON:0001007!3.55e-18!155;UBERON:0001555!3.55e-18!155;UBERON:0007026!3.55e-18!155;UBERON:0004921!5.38e-18!129;UBERON:0004185!5.38e-18!129;UBERON:0000065!2.58e-14!53;UBERON:0000077!1.32e-13!130;UBERON:0005178!6.01e-13!34;UBERON:0002224!6.01e-13!34;UBERON:0005181!1.95e-12!35;UBERON:0005911!3.53e-12!82;UBERON:0001004!1.59e-10!72;UBERON:0002294!1.02e-09!7;UBERON:0001173!1.02e-09!7;UBERON:0004912!1.02e-09!7;UBERON:0007196!1.16e-09!14;UBERON:0001558!1.16e-09!14;UBERON:0005153!2.01e-09!37;UBERON:0002048!2.75e-09!22;UBERON:0000117!2.75e-09!22;UBERON:0000171!2.75e-09!22;UBERON:0000170!2.75e-09!22;UBERON:0005597!2.75e-09!22;UBERON:0000118!2.75e-09!22;UBERON:0005157!1.65e-08!51;UBERON:0008947!1.83e-08!38;UBERON:0003258!1.83e-08!38;UBERON:0001041!2.13e-08!98;UBERON:0000915!8.67e-08!52;UBERON:0000072!9.45e-08!46;UBERON:0005409!1.19e-07!35;UBERON:0005177!4.11e-07!107;UBERON:0001008!5.15e-07!45;UBERON:0000464!5.71e-07!104 | |ontology_enrichment_uberon=UBERON:0004119!1.25e-24!169;UBERON:0000925!1.25e-24!169;UBERON:0006595!1.25e-24!169;UBERON:0001007!3.55e-18!155;UBERON:0001555!3.55e-18!155;UBERON:0007026!3.55e-18!155;UBERON:0004921!5.38e-18!129;UBERON:0004185!5.38e-18!129;UBERON:0000065!2.58e-14!53;UBERON:0000077!1.32e-13!130;UBERON:0005178!6.01e-13!34;UBERON:0002224!6.01e-13!34;UBERON:0005181!1.95e-12!35;UBERON:0005911!3.53e-12!82;UBERON:0001004!1.59e-10!72;UBERON:0002294!1.02e-09!7;UBERON:0001173!1.02e-09!7;UBERON:0004912!1.02e-09!7;UBERON:0007196!1.16e-09!14;UBERON:0001558!1.16e-09!14;UBERON:0005153!2.01e-09!37;UBERON:0002048!2.75e-09!22;UBERON:0000117!2.75e-09!22;UBERON:0000171!2.75e-09!22;UBERON:0000170!2.75e-09!22;UBERON:0005597!2.75e-09!22;UBERON:0000118!2.75e-09!22;UBERON:0005157!1.65e-08!51;UBERON:0008947!1.83e-08!38;UBERON:0003258!1.83e-08!38;UBERON:0001041!2.13e-08!98;UBERON:0000915!8.67e-08!52;UBERON:0000072!9.45e-08!46;UBERON:0005409!1.19e-07!35;UBERON:0005177!4.11e-07!107;UBERON:0001008!5.15e-07!45;UBERON:0000464!5.71e-07!104 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.21e-17;22!UBERON:0000160;6.20e-13;17!UBERON:0004921;5.11e-12;33!UBERON:0007196;1.23e-11;15!UBERON:0001558;1.23e-11;15!UBERON:0005178;4.45e-11;34!UBERON:0002224;4.45e-11;34!UBERON:0002294;5.85e-11;7!UBERON:0001173;5.85e-11;7!UBERON:0002108;1.30e-10;4!UBERON:0004815;5.08e-10;3!UBERON:0002031;5.08e-10;3!UBERON:0005181;1.37e-09;35!UBERON:0000065;1.97e-09;44!UBERON:0002048;1.79e-07;22!UBERON:0000117;1.79e-07;22!UBERON:0000171;1.79e-07;22!UBERON:0000170;1.79e-07;22!UBERON:0002394;2.90e-07;4!UBERON:0003928;2.90e-07;4!UBERON:0000059;3.86e-07;11!UBERON:0003126;4.68e-07;7!UBERON:0001005;4.68e-07;7!UBERON:0003127;6.11e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0005409;1.21e-17;22!UBERON:0000160;6.20e-13;17!UBERON:0004921;5.11e-12;33!UBERON:0007196;1.23e-11;15!UBERON:0001558;1.23e-11;15!UBERON:0005178;4.45e-11;34!UBERON:0002224;4.45e-11;34!UBERON:0002294;5.85e-11;7!UBERON:0001173;5.85e-11;7!UBERON:0002108;1.30e-10;4!UBERON:0004815;5.08e-10;3!UBERON:0002031;5.08e-10;3!UBERON:0005181;1.37e-09;35!UBERON:0000065;1.97e-09;44!UBERON:0002048;1.79e-07;22!UBERON:0000117;1.79e-07;22!UBERON:0000171;1.79e-07;22!UBERON:0000170;1.79e-07;22!UBERON:0002394;2.90e-07;4!UBERON:0003928;2.90e-07;4!UBERON:0000059;3.86e-07;11!UBERON:0003126;4.68e-07;7!UBERON:0001005;4.68e-07;7!UBERON:0003127;6.11e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.41e-20,160;UBERON:0000925,2.41e-20,160;UBERON:0006595,2.41e-20,160;UBERON:0004921,1.01e-16,118;UBERON:0005409,2.49e-15,25;UBERON:0001007,1.85e-14,145;UBERON:0001555,1.85e-14,145;UBERON:0007026,1.85e-14,145;UBERON:0000160,5.64e-13,17;UBERON:0005178,4.76e-12,34;UBERON:0002224,4.76e-12,34;UBERON:0007196,1.09e-11,15;UBERON:0001558,1.09e-11,15;UBERON:0005181,1.28e-11,35;UBERON:0002108,1.19e-10,4;UBERON:0000065,2.69e-10,54;UBERON:0004815,6.21e-10,3;UBERON:0002031,6.21e-10,3;UBERON:0008947,8.95e-09,38;UBERON:0003258,8.95e-09,38;UBERON:0002294,1.77e-08,9;UBERON:0001173,1.77e-08,9;UBERON:0004912,1.77e-08,9;UBERON:0001041,6.59e-08,87;UBERON:0002048,1.89e-07,22;UBERON:0000117,1.89e-07,22;UBERON:0000171,1.89e-07,22;UBERON:0000170,1.89e-07,22;UBERON:0005597,1.89e-07,22;UBERON:0000118,1.89e-07,22;UBERON:0005911,1.98e-07,82;UBERON:0000059,3.71e-07,11;UBERON:0003126,4.10e-07,7;UBERON:0001005,4.10e-07,7;UBERON:0003127,5.25e-07,2;UBERON:0000915,6.66e-07,52 | |||
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| ||
|short_description=p2@VILL | |short_description=p2@VILL | ||
}} | }} |
Revision as of 02:29, 20 November 2012
Short description: | p2@VILL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_VILL_5end |
Coexpression cluster: | C3765_amniotic_colon_Alveolar_duodenum_small_mucinous_stomach |
Association with transcript: | 0bp_to_uc003chk.1_5end |
EntrezGene: | VILL |
HGNC: | 30906 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 2.98e-21 | 13 |
endo-epithelial cell | 1.12e-12 | 42 |
epithelial cell of tracheobronchial tree | 1.18e-11 | 9 |
epithelial cell of lower respiratory tract | 1.18e-11 | 9 |
bronchial epithelial cell | 6.21e-10 | 3 |
endodermal cell | 3.14e-08 | 58 |
transitional epithelial cell | 2.97e-07 | 4 |
urothelial cell | 2.97e-07 | 4 |
corneal epithelial cell | 9.33e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.37e-07 | 2 |
adenocarcinoma | 5.74e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.