FFCP PHASE1:Mm9::chr11:113613628..113613663,-: Difference between revisions
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|id=chr11:113613628..113613663,- | |id=chr11:113613628..113613663,- | ||
|ontology_enrichment_celltype=CL:0002563!2.48e-09!9;CL:0002251!2.48e-09!9 | |ontology_enrichment_celltype=CL:0002563!2.48e-09!9;CL:0002251!2.48e-09!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.32e-27,9;CL:0002251,4.32e-27,9;CL:0000066,9.49e-19,25;CL:0000239,4.18e-18,6;CL:0000677,4.18e-18,6;CL:0000584,4.18e-18,6;CL:0002076,1.28e-15,15;CL:0000075,1.96e-15,7;CL:0000223,7.76e-14,20;CL:0002250,1.47e-10,3;CL:0000682,1.96e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.87e-14!15;UBERON:0001242!1.06e-12!13;UBERON:0000060!1.06e-12!13;UBERON:0001262!1.06e-12!13;UBERON:0004786!1.06e-12!13;UBERON:0004923!5.88e-12!24;UBERON:0000160!9.52e-11!43;UBERON:0005409!1.30e-10!59;UBERON:0003350!2.48e-09!9;UBERON:0004808!2.48e-09!9;UBERON:0001277!2.48e-09!9;UBERON:0004119!1.86e-07!130;UBERON:0000925!1.86e-07!130;UBERON:0006595!1.86e-07!130;UBERON:0000485!5.47e-07!11;UBERON:0001007!6.16e-07!128;UBERON:0001555!6.16e-07!128;UBERON:0007026!6.16e-07!128 | |ontology_enrichment_uberon=UBERON:0000344!1.87e-14!15;UBERON:0001242!1.06e-12!13;UBERON:0000060!1.06e-12!13;UBERON:0001262!1.06e-12!13;UBERON:0004786!1.06e-12!13;UBERON:0004923!5.88e-12!24;UBERON:0000160!9.52e-11!43;UBERON:0005409!1.30e-10!59;UBERON:0003350!2.48e-09!9;UBERON:0004808!2.48e-09!9;UBERON:0001277!2.48e-09!9;UBERON:0004119!1.86e-07!130;UBERON:0000925!1.86e-07!130;UBERON:0006595!1.86e-07!130;UBERON:0000485!5.47e-07!11;UBERON:0001007!6.16e-07!128;UBERON:0001555!6.16e-07!128;UBERON:0007026!6.16e-07!128 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.84e-44,15;UBERON:0001242,3.17e-38,13;UBERON:0001262,3.17e-38,13;UBERON:0004786,3.17e-38,13;UBERON:0000160,1.20e-28,31;UBERON:0003350,4.32e-27,9;UBERON:0004808,4.32e-27,9;UBERON:0001277,4.32e-27,9;UBERON:0004923,2.48e-26,24;UBERON:0000485,7.04e-22,11;UBERON:0005409,6.11e-20,47;UBERON:0000331,4.91e-10,3;UBERON:0002116,4.91e-10,3;UBERON:0001204,4.91e-10,3;UBERON:0001168,4.91e-10,3;UBERON:0001007,1.98e-08,116;UBERON:0001555,1.98e-08,116;UBERON:0007026,1.98e-08,116;UBERON:0004119,3.29e-08,118;UBERON:0000925,3.29e-08,118;UBERON:0006595,3.29e-08,118;UBERON:0002108,1.27e-07,4;UBERON:0001962,3.15e-07,2;UBERON:0001961,3.15e-07,2;UBERON:0001744,3.15e-07,2;UBERON:0001155,4.47e-07,2;UBERON:0000059,4.47e-07,2 | |||
|phase1_expression=0,3.48975407639361,5.0049916332849,1.51232105653415,2.00358291978539,9.23335995515394,5.37309073369709,0,0.140788722151667,0,0,0,0.171200729931206,0,0.333109761815663,0,0.699561878128147,0,0,0,0.0850432901510698,0,0,4.15980299262857,4.35877634027623,2.8711598205751,9.47676391549965,7.97243560937789,5.51067916423484,4.28451220591882,3.54768817048488,0,0,0,6.93243887403059,4.48833542467929,7.35009682544529,0,0,1.0470474879476,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0,0.419959264876088,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0,0.142371680799103,0,0,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,1.02765491747154,0,0,0,0,0,0,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,3.72783522436244,0.292780797011547,0,4.08731288333746,0.239630249011841,0,1.01656181658452,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0.702213187313235,1.02939162845886,0.568326998791185,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,1.65209391491899,0,0,0.232236671860439,0.257734922644187,0.403367049246685,0,0.380451252225118,0.949058123089023,0.164698954724011,0,0.198956472041151,0.38992817423824,3.59527763461689,2.37751854862164,2.58883655230677,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.358794827043824,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0.54390568381871,0.983528546038072,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0.120625849856312,0.954978752025092,0.328281799490123,0.582961673259701,0,0,0,0,0.188368457004691,0,0.457556346413045,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0,0,0.209088296014469,0.436725127492355,0.269728692769641,0.165306911450672,0.26175594198403,5.83267379813068,0,1.12738587736838,0.149516546043979,0,0.583353565032143,0,0,0.234714477291508,0,0,0,0,0,0.405450430580328,0,0.129920822977795,0,0,0.240390899039938,0,0.100966449948148,0.0762068066549998,0.302478555410522,0.0974578807397524,0.481059208201647,0.350630706544707,0.680191150845634,0,0.0897138566094757,0.167884616364078,0,0.187682475451182,0,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377252682772152,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.282328141245992,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,3.48975407639361,5.0049916332849,1.51232105653415,2.00358291978539,9.23335995515394,5.37309073369709,0,0.140788722151667,0,0,0,0.171200729931206,0,0.333109761815663,0,0.699561878128147,0,0,0,0.0850432901510698,0,0,4.15980299262857,4.35877634027623,2.8711598205751,9.47676391549965,7.97243560937789,5.51067916423484,4.28451220591882,3.54768817048488,0,0,0,6.93243887403059,4.48833542467929,7.35009682544529,0,0,1.0470474879476,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0,0.419959264876088,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0,0.142371680799103,0,0,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,1.02765491747154,0,0,0,0,0,0,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,3.72783522436244,0.292780797011547,0,4.08731288333746,0.239630249011841,0,1.01656181658452,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0.702213187313235,1.02939162845886,0.568326998791185,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,1.65209391491899,0,0,0.232236671860439,0.257734922644187,0.403367049246685,0,0.380451252225118,0.949058123089023,0.164698954724011,0,0.198956472041151,0.38992817423824,3.59527763461689,2.37751854862164,2.58883655230677,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.358794827043824,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0.54390568381871,0.983528546038072,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0.120625849856312,0.954978752025092,0.328281799490123,0.582961673259701,0,0,0,0,0.188368457004691,0,0.457556346413045,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0,0,0.209088296014469,0.436725127492355,0.269728692769641,0.165306911450672,0.26175594198403,5.83267379813068,0,1.12738587736838,0.149516546043979,0,0.583353565032143,0,0,0.234714477291508,0,0,0,0,0,0.405450430580328,0,0.129920822977795,0,0,0.240390899039938,0,0.100966449948148,0.0762068066549998,0.302478555410522,0.0974578807397524,0.481059208201647,0.350630706544707,0.680191150845634,0,0.0897138566094757,0.167884616364078,0,0.187682475451182,0,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377252682772152,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.282328141245992,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0 | ||
|short_description=p8@Cdc42ep4 | |short_description=p8@Cdc42ep4 | ||
}} | }} |
Revision as of 21:33, 14 November 2012
Short description: | p8@Cdc42ep4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Cdc42ep4_5end |
Coexpression cluster: | MCL_coexpression_mm9:395 |
Association with transcript: | -433bp_to_ENSMUST00000053536_5end |
EntrezGene: | Cdc42ep4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.32e-27 | 9 |
epithelial cell of alimentary canal | 4.32e-27 | 9 |
epithelial cell | 9.49e-19 | 25 |
brush border epithelial cell | 4.18e-18 | 6 |
gut absorptive cell | 4.18e-18 | 6 |
enterocyte | 4.18e-18 | 6 |
endo-epithelial cell | 1.28e-15 | 15 |
columnar/cuboidal epithelial cell | 1.96e-15 | 7 |
endodermal cell | 7.76e-14 | 20 |
intestinal crypt stem cell | 1.47e-10 | 3 |
M cell of gut | 1.96e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.84e-44 | 15 |
intestinal mucosa | 3.17e-38 | 13 |
wall of intestine | 3.17e-38 | 13 |
gastrointestinal system mucosa | 3.17e-38 | 13 |
intestine | 1.20e-28 | 31 |
epithelium of mucosa | 4.32e-27 | 9 |
gastrointestinal system epithelium | 4.32e-27 | 9 |
intestinal epithelium | 4.32e-27 | 9 |
organ component layer | 2.48e-26 | 24 |
simple columnar epithelium | 7.04e-22 | 11 |
gastrointestinal system | 6.11e-20 | 47 |
ileal mucosa | 4.91e-10 | 3 |
ileum | 4.91e-10 | 3 |
mucosa of small intestine | 4.91e-10 | 3 |
wall of small intestine | 4.91e-10 | 3 |
digestive system | 1.98e-08 | 116 |
digestive tract | 1.98e-08 | 116 |
primitive gut | 1.98e-08 | 116 |
endoderm-derived structure | 3.29e-08 | 118 |
endoderm | 3.29e-08 | 118 |
presumptive endoderm | 3.29e-08 | 118 |
small intestine | 1.27e-07 | 4 |
gut-associated lymphoid tissue | 3.15e-07 | 2 |
mucosa-associated lymphoid tissue | 3.15e-07 | 2 |
lymphoid tissue | 3.15e-07 | 2 |
colon | 4.47e-07 | 2 |
large intestine | 4.47e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.