FFCP PHASE1:Mm9::chr2:180937241..180937268,-: Difference between revisions
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|id=chr2:180937241..180937268,- | |id=chr2:180937241..180937268,- | ||
|ontology_enrichment_celltype=CL:0000239!1.23e-07!6;CL:0000677!1.23e-07!6;CL:0000212!1.23e-07!6;CL:0000584!1.23e-07!6;CL:0002563!3.00e-07!9;CL:0002251!3.00e-07!9 | |ontology_enrichment_celltype=CL:0000239!1.23e-07!6;CL:0000677!1.23e-07!6;CL:0000212!1.23e-07!6;CL:0000584!1.23e-07!6;CL:0002563!3.00e-07!9;CL:0002251!3.00e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.16e-11,6;CL:0000677,1.16e-11,6;CL:0000584,1.16e-11,6;CL:0000075,7.26e-10,7;CL:0002563,1.80e-07,9;CL:0002251,1.80e-07,9;CL:0000682,8.53e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.26e-16!59;UBERON:0000160!3.62e-14!43;UBERON:0000344!1.50e-13!15;UBERON:0001242!1.18e-11!13;UBERON:0000060!1.18e-11!13;UBERON:0001262!1.18e-11!13;UBERON:0004786!1.18e-11!13;UBERON:0004923!1.37e-11!24;UBERON:0003350!3.00e-07!9;UBERON:0004808!3.00e-07!9;UBERON:0001277!3.00e-07!9 | |ontology_enrichment_uberon=UBERON:0005409!1.26e-16!59;UBERON:0000160!3.62e-14!43;UBERON:0000344!1.50e-13!15;UBERON:0001242!1.18e-11!13;UBERON:0000060!1.18e-11!13;UBERON:0001262!1.18e-11!13;UBERON:0004786!1.18e-11!13;UBERON:0004923!1.37e-11!24;UBERON:0003350!3.00e-07!9;UBERON:0004808!3.00e-07!9;UBERON:0001277!3.00e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.75e-30,31;UBERON:0005409,4.17e-29,47;UBERON:0000344,2.80e-17,15;UBERON:0001242,3.12e-14,13;UBERON:0001262,3.12e-14,13;UBERON:0004786,3.12e-14,13;UBERON:0004923,2.66e-13,24;UBERON:0004119,5.82e-11,118;UBERON:0000925,5.82e-11,118;UBERON:0006595,5.82e-11,118;UBERON:0001007,1.81e-10,116;UBERON:0001555,1.81e-10,116;UBERON:0007026,1.81e-10,116;UBERON:0000014,3.49e-09,5;UBERON:0001003,3.49e-09,5;UBERON:0002097,3.49e-09,5;UBERON:0002199,3.49e-09,5;UBERON:0007029,3.49e-09,5;UBERON:0007376,3.49e-09,5;UBERON:0002416,3.49e-09,5;UBERON:0007383,3.49e-09,5;UBERON:0004921,5.27e-09,114;UBERON:0002108,1.68e-08,4;UBERON:0003350,1.80e-07,9;UBERON:0004808,1.80e-07,9;UBERON:0001277,1.80e-07,9;UBERON:0000331,3.06e-07,3;UBERON:0002116,3.06e-07,3;UBERON:0001204,3.06e-07,3;UBERON:0001168,3.06e-07,3 | |||
|phase1_expression=0,18.1467211972468,17.7449703361919,15.1232105653415,20.0358291978539,3.69334398206158,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1996590257033,5.96464130774642,17.2269589234506,15.0766698655676,14.2211013572687,41.6151288609459,19.6583501212746,17.5167103417691,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0,0,0,0,0,0,0,24.472301805703,0,0,0.161766849947409,0,0,16.775258509631,0,0,30.654846625031,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0.834141747676794,2.78601733217733,6.37924622864625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1380584599145,19.5693419331023,0,0,0.128867461322093,1.21010114774006,0.667134131534611,3.42406127002606,7.59246498471219,5.27036655116835,3.51869292320377,2.98434708061726,2.14460495831032,9.88701349519644,9.07779809473716,7.76650965692032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0.491589944147214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.90648863777438,0,6.76033637060068,11.3025098687134,4.52346936961169,4.29740438411291,3.93938159388147,3.20628920292836,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0,0.324016022465404,3.55450103224597,3.27543845619266,3.2367443132357,2.64491058321075,2.87931536182433,4.53652406521275,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0,7.70883304291719,0,0,0,0,0,0,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.209613162627982,0.367687016900028,0.666740183404846,0,0.64183841918363,0,0,0,0,0.192075457214608,0.114870937911227,0.952587382566147,0.463537303779422,0,0.412085900803307,0.147198920134397,0,0.532427418478012,0.953744759789284,0.581385666529314,0.282328141245992,0.25384382367503,0.365855945745545,0.263069711437843,0.135804113845862,1.12228454331548,0.118635018124174,0.0985044823755635,0,0.309873682371932,2.12197272079256,0.999242311751784,1.16965804222704,1.71896843238639,0.765153328275374,0.441182838239031,0 | |phase1_expression=0,18.1467211972468,17.7449703361919,15.1232105653415,20.0358291978539,3.69334398206158,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1996590257033,5.96464130774642,17.2269589234506,15.0766698655676,14.2211013572687,41.6151288609459,19.6583501212746,17.5167103417691,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0,0,0,0,0,0,0,24.472301805703,0,0,0.161766849947409,0,0,16.775258509631,0,0,30.654846625031,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0.834141747676794,2.78601733217733,6.37924622864625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1380584599145,19.5693419331023,0,0,0.128867461322093,1.21010114774006,0.667134131534611,3.42406127002606,7.59246498471219,5.27036655116835,3.51869292320377,2.98434708061726,2.14460495831032,9.88701349519644,9.07779809473716,7.76650965692032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0.491589944147214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.90648863777438,0,6.76033637060068,11.3025098687134,4.52346936961169,4.29740438411291,3.93938159388147,3.20628920292836,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0,0.324016022465404,3.55450103224597,3.27543845619266,3.2367443132357,2.64491058321075,2.87931536182433,4.53652406521275,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0,7.70883304291719,0,0,0,0,0,0,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.209613162627982,0.367687016900028,0.666740183404846,0,0.64183841918363,0,0,0,0,0.192075457214608,0.114870937911227,0.952587382566147,0.463537303779422,0,0.412085900803307,0.147198920134397,0,0.532427418478012,0.953744759789284,0.581385666529314,0.282328141245992,0.25384382367503,0.365855945745545,0.263069711437843,0.135804113845862,1.12228454331548,0.118635018124174,0.0985044823755635,0,0.309873682371932,2.12197272079256,0.999242311751784,1.16965804222704,1.71896843238639,0.765153328275374,0.441182838239031,0 | ||
|short_description=p2@Ptk6 | |short_description=p2@Ptk6 | ||
}} | }} |
Revision as of 20:46, 14 November 2012
Short description: | p2@Ptk6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ptk6_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 225bp_to_ENSMUST00000016511, NM_009184, uc008olk.1, uc012cmj.1_5end |
EntrezGene: | Ptk6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.16e-11 | 6 |
gut absorptive cell | 1.16e-11 | 6 |
enterocyte | 1.16e-11 | 6 |
columnar/cuboidal epithelial cell | 7.26e-10 | 7 |
intestinal epithelial cell | 1.80e-07 | 9 |
epithelial cell of alimentary canal | 1.80e-07 | 9 |
M cell of gut | 8.53e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.75e-30 | 31 |
gastrointestinal system | 4.17e-29 | 47 |
mucosa | 2.80e-17 | 15 |
intestinal mucosa | 3.12e-14 | 13 |
wall of intestine | 3.12e-14 | 13 |
gastrointestinal system mucosa | 3.12e-14 | 13 |
organ component layer | 2.66e-13 | 24 |
endoderm-derived structure | 5.82e-11 | 118 |
endoderm | 5.82e-11 | 118 |
presumptive endoderm | 5.82e-11 | 118 |
digestive system | 1.81e-10 | 116 |
digestive tract | 1.81e-10 | 116 |
primitive gut | 1.81e-10 | 116 |
zone of skin | 3.49e-09 | 5 |
skin epidermis | 3.49e-09 | 5 |
skin of body | 3.49e-09 | 5 |
integument | 3.49e-09 | 5 |
surface | 3.49e-09 | 5 |
outer epithelium | 3.49e-09 | 5 |
integumental system | 3.49e-09 | 5 |
enveloping layer of ectoderm | 3.49e-09 | 5 |
subdivision of digestive tract | 5.27e-09 | 114 |
small intestine | 1.68e-08 | 4 |
epithelium of mucosa | 1.80e-07 | 9 |
gastrointestinal system epithelium | 1.80e-07 | 9 |
intestinal epithelium | 1.80e-07 | 9 |
ileal mucosa | 3.06e-07 | 3 |
ileum | 3.06e-07 | 3 |
mucosa of small intestine | 3.06e-07 | 3 |
wall of small intestine | 3.06e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.