FFCP PHASE1:Mm9::chr4:124805061..124805087,-: Difference between revisions
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|id=chr4:124805061..124805087,- | |id=chr4:124805061..124805087,- | ||
|ontology_enrichment_celltype=CL:0000063!1.29e-16!66;CL:0002320!1.36e-10!46;CL:0000134!1.36e-10!46;CL:0000219!2.72e-10!54;CL:0000988!2.67e-09!32;CL:0002032!2.67e-09!32;CL:0000037!2.67e-09!32;CL:0000566!2.67e-09!32;CL:0000837!2.67e-09!32;CL:0000838!1.37e-07!12;CL:0002031!3.34e-07!25;CL:0000084!5.46e-07!11;CL:0000827!5.46e-07!11;CL:0000066!7.21e-07!25 | |ontology_enrichment_celltype=CL:0000063!1.29e-16!66;CL:0002320!1.36e-10!46;CL:0000134!1.36e-10!46;CL:0000219!2.72e-10!54;CL:0000988!2.67e-09!32;CL:0002032!2.67e-09!32;CL:0000037!2.67e-09!32;CL:0000566!2.67e-09!32;CL:0000837!2.67e-09!32;CL:0000838!1.37e-07!12;CL:0002031!3.34e-07!25;CL:0000084!5.46e-07!11;CL:0000827!5.46e-07!11;CL:0000066!7.21e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002320,4.04e-11,46;CL:0000134,4.04e-11,46;CL:0000219,1.50e-10,54;CL:0000988,9.49e-10,32;CL:0002032,9.49e-10,32;CL:0000037,9.49e-10,32;CL:0000837,9.49e-10,32;CL:0000838,5.98e-08,12;CL:0002031,1.62e-07,25;CL:0000084,2.58e-07,11;CL:0000827,2.58e-07,11;CL:0000066,6.15e-07,25;CL:0000542,8.48e-07,13;CL:0000051,8.48e-07,13;CL:0000791,8.61e-07,9;CL:0000789,8.61e-07,9;CL:0002420,8.61e-07,9;CL:0002419,8.61e-07,9;CL:0000790,8.61e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.01e-12!48;UBERON:0001007!2.18e-11!128;UBERON:0001555!2.18e-11!128;UBERON:0007026!2.18e-11!128;UBERON:0004119!3.64e-11!130;UBERON:0000925!3.64e-11!130;UBERON:0006595!3.64e-11!130;UBERON:0004921!1.35e-10!126;UBERON:0004185!1.35e-10!126;UBERON:0002384!1.36e-10!46;UBERON:0002390!1.48e-10!45;UBERON:0003061!1.48e-10!45;UBERON:0000344!3.27e-09!15;UBERON:0004923!1.97e-08!24;UBERON:0002405!2.56e-08!70;UBERON:0001242!2.86e-08!13;UBERON:0000060!2.86e-08!13;UBERON:0001262!2.86e-08!13;UBERON:0004786!2.86e-08!13;UBERON:0000490!4.61e-08!66;UBERON:0005409!5.15e-07!59;UBERON:0000072!5.57e-07!27 | |ontology_enrichment_uberon=UBERON:0002193!7.01e-12!48;UBERON:0001007!2.18e-11!128;UBERON:0001555!2.18e-11!128;UBERON:0007026!2.18e-11!128;UBERON:0004119!3.64e-11!130;UBERON:0000925!3.64e-11!130;UBERON:0006595!3.64e-11!130;UBERON:0004921!1.35e-10!126;UBERON:0004185!1.35e-10!126;UBERON:0002384!1.36e-10!46;UBERON:0002390!1.48e-10!45;UBERON:0003061!1.48e-10!45;UBERON:0000344!3.27e-09!15;UBERON:0004923!1.97e-08!24;UBERON:0002405!2.56e-08!70;UBERON:0001242!2.86e-08!13;UBERON:0000060!2.86e-08!13;UBERON:0001262!2.86e-08!13;UBERON:0004786!2.86e-08!13;UBERON:0000490!4.61e-08!66;UBERON:0005409!5.15e-07!59;UBERON:0000072!5.57e-07!27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,9.31e-14,116;UBERON:0001555,9.31e-14,116;UBERON:0007026,9.31e-14,116;UBERON:0004119,2.33e-13,118;UBERON:0000925,2.33e-13,118;UBERON:0006595,2.33e-13,118;UBERON:0004921,7.48e-13,114;UBERON:0002193,1.03e-12,48;UBERON:0002405,1.03e-12,48;UBERON:0002390,2.67e-11,45;UBERON:0003061,2.67e-11,45;UBERON:0002384,4.04e-11,46;UBERON:0005409,3.84e-10,47;UBERON:0000344,1.14e-09,15;UBERON:0004923,1.11e-08,24;UBERON:0001242,1.14e-08,13;UBERON:0001262,1.14e-08,13;UBERON:0004786,1.14e-08,13;UBERON:0000160,4.73e-08,31;UBERON:0000077,9.90e-08,35;UBERON:0000490,1.60e-07,66;UBERON:0000072,1.64e-07,27;UBERON:0004177,4.21e-07,29;UBERON:0005057,4.21e-07,29;UBERON:0006562,8.78e-07,24;UBERON:0001557,8.78e-07,24;UBERON:0001042,8.78e-07,24;UBERON:0008814,8.78e-07,24;UBERON:0009145,8.78e-07,24 | |||
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| ||
|short_description=p1@Zc3h12a | |short_description=p1@Zc3h12a | ||
}} | }} |
Revision as of 17:04, 14 November 2012
Short description: | p1@Zc3h12a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zc3h12a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2291 |
Association with transcript: | 0bp_to_ENSMUST00000036188_5end |
EntrezGene: | Zc3h12a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 4.04e-11 | 46 |
mesenchymal cell | 4.04e-11 | 46 |
motile cell | 1.50e-10 | 54 |
hematopoietic cell | 9.49e-10 | 32 |
hematopoietic oligopotent progenitor cell | 9.49e-10 | 32 |
hematopoietic stem cell | 9.49e-10 | 32 |
hematopoietic multipotent progenitor cell | 9.49e-10 | 32 |
lymphoid lineage restricted progenitor cell | 5.98e-08 | 12 |
hematopoietic lineage restricted progenitor cell | 1.62e-07 | 25 |
T cell | 2.58e-07 | 11 |
pro-T cell | 2.58e-07 | 11 |
epithelial cell | 6.15e-07 | 25 |
lymphocyte | 8.48e-07 | 13 |
common lymphoid progenitor | 8.48e-07 | 13 |
mature alpha-beta T cell | 8.61e-07 | 9 |
alpha-beta T cell | 8.61e-07 | 9 |
immature T cell | 8.61e-07 | 9 |
mature T cell | 8.61e-07 | 9 |
immature alpha-beta T cell | 8.61e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
digestive system | 9.31e-14 | 116 |
digestive tract | 9.31e-14 | 116 |
primitive gut | 9.31e-14 | 116 |
endoderm-derived structure | 2.33e-13 | 118 |
endoderm | 2.33e-13 | 118 |
presumptive endoderm | 2.33e-13 | 118 |
subdivision of digestive tract | 7.48e-13 | 114 |
hemolymphoid system | 1.03e-12 | 48 |
immune system | 1.03e-12 | 48 |
hematopoietic system | 2.67e-11 | 45 |
blood island | 2.67e-11 | 45 |
connective tissue | 4.04e-11 | 46 |
gastrointestinal system | 3.84e-10 | 47 |
mucosa | 1.14e-09 | 15 |
organ component layer | 1.11e-08 | 24 |
intestinal mucosa | 1.14e-08 | 13 |
wall of intestine | 1.14e-08 | 13 |
gastrointestinal system mucosa | 1.14e-08 | 13 |
intestine | 4.73e-08 | 31 |
mixed endoderm/mesoderm-derived structure | 9.90e-08 | 35 |
unilaminar epithelium | 1.60e-07 | 66 |
segment of respiratory tract | 1.64e-07 | 27 |
hemopoietic organ | 4.21e-07 | 29 |
immune organ | 4.21e-07 | 29 |
pharynx | 8.78e-07 | 24 |
upper respiratory tract | 8.78e-07 | 24 |
chordate pharynx | 8.78e-07 | 24 |
pharyngeal arch system | 8.78e-07 | 24 |
pharyngeal region of foregut | 8.78e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.