FFCP PHASE1:Mm9::chr6:124838210..124838235,-: Difference between revisions
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|id=chr6:124838210..124838235,- | |id=chr6:124838210..124838235,- | ||
|ontology_enrichment_celltype=CL:0000624!9.15e-07!8 | |ontology_enrichment_celltype=CL:0000624!9.15e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,4.88e-09,8;CL:0000791,9.89e-08,9;CL:0000789,9.89e-08,9;CL:0002420,9.89e-08,9;CL:0002419,9.89e-08,9;CL:0000790,9.89e-08,9;CL:0000893,4.01e-07,6;CL:0002489,4.01e-07,6;CL:0000898,4.01e-07,6;CL:0000809,4.01e-07,6;CL:0000810,4.01e-07,6;CL:0000895,4.01e-07,6;CL:0000808,4.01e-07,6;CL:0000894,4.01e-07,6;CL:0000806,4.01e-07,6;CL:0000807,4.01e-07,6;CL:0000805,4.01e-07,6;CL:0002425,4.01e-07,6;CL:0002436,4.01e-07,6;CL:0002427,4.01e-07,6;CL:0002428,4.01e-07,6;CL:0002429,4.01e-07,6;CL:0002433,4.01e-07,6;CL:0002431,4.01e-07,6;CL:0002432,4.01e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.23e-18,48;UBERON:0002405,1.23e-18,48;UBERON:0002390,5.74e-18,45;UBERON:0003061,5.74e-18,45;UBERON:0004177,3.53e-17,29;UBERON:0005057,3.53e-17,29;UBERON:0000077,1.74e-14,35;UBERON:0003408,6.21e-14,24;UBERON:0002370,3.17e-13,23;UBERON:0000974,3.17e-13,23;UBERON:0004807,3.17e-13,23;UBERON:0005058,3.17e-13,23;UBERON:0003351,3.17e-13,23;UBERON:0009113,3.17e-13,23;UBERON:0003295,3.17e-13,23;UBERON:0009722,3.17e-13,23;UBERON:0005562,3.17e-13,23;UBERON:0007690,3.17e-13,23;UBERON:0006562,2.29e-12,24;UBERON:0001557,2.29e-12,24;UBERON:0001042,2.29e-12,24;UBERON:0008814,2.29e-12,24;UBERON:0009145,2.29e-12,24;UBERON:0001004,4.85e-12,42;UBERON:0001007,1.28e-11,116;UBERON:0001555,1.28e-11,116;UBERON:0007026,1.28e-11,116;UBERON:0004921,1.70e-11,114;UBERON:0000065,2.05e-11,41;UBERON:0004119,4.06e-11,118;UBERON:0000925,4.06e-11,118;UBERON:0006595,4.06e-11,118;UBERON:0000072,3.37e-10,27;UBERON:0003081,5.33e-10,87;UBERON:0001041,1.12e-08,80;UBERON:0007811,1.65e-07,36 | |||
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| ||
|short_description=p1@Cd4 | |short_description=p1@Cd4 | ||
}} | }} |
Revision as of 14:09, 14 November 2012
Short description: | p1@Cd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cd4_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 0bp_to_ENSMUST00000130378, ENSMUST00000151594, NM_013488, uc009dsi.1, uc009dsj.1, uc009dsk.1_5end |
EntrezGene: | Cd4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 4.88e-09 | 8 |
mature alpha-beta T cell | 9.89e-08 | 9 |
alpha-beta T cell | 9.89e-08 | 9 |
immature T cell | 9.89e-08 | 9 |
mature T cell | 9.89e-08 | 9 |
immature alpha-beta T cell | 9.89e-08 | 9 |
thymocyte | 4.01e-07 | 6 |
double negative thymocyte | 4.01e-07 | 6 |
naive T cell | 4.01e-07 | 6 |
double-positive, alpha-beta thymocyte | 4.01e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 4.01e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 4.01e-07 | 6 |
DN4 thymocyte | 4.01e-07 | 6 |
DN1 thymic pro-T cell | 4.01e-07 | 6 |
DN2 thymocyte | 4.01e-07 | 6 |
DN3 thymocyte | 4.01e-07 | 6 |
immature single positive thymocyte | 4.01e-07 | 6 |
early T lineage precursor | 4.01e-07 | 6 |
mature CD4 single-positive thymocyte | 4.01e-07 | 6 |
resting double-positive thymocyte | 4.01e-07 | 6 |
double-positive blast | 4.01e-07 | 6 |
CD69-positive double-positive thymocyte | 4.01e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 4.01e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 4.01e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 4.01e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.