FFCP PHASE1:Mm9::chr12:47920231..47920236,-: Difference between revisions
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|id=chr12:47920231..47920236,- | |id=chr12:47920231..47920236,- | ||
|ontology_enrichment_celltype=CL:0000117!1.89e-14!23;CL:0000337!1.89e-14!23;CL:0000540!1.59e-13!33;CL:0000047!1.59e-13!33;CL:0000031!1.59e-13!33;CL:0000404!1.59e-13!33;CL:0002319!5.55e-13!43;CL:0000221!2.32e-12!44;CL:0000133!2.32e-12!44;CL:0000393!1.38e-09!39;CL:0000211!1.38e-09!39;CL:0000055!3.06e-09!50 | |ontology_enrichment_celltype=CL:0000117!1.89e-14!23;CL:0000337!1.89e-14!23;CL:0000540!1.59e-13!33;CL:0000047!1.59e-13!33;CL:0000031!1.59e-13!33;CL:0000404!1.59e-13!33;CL:0002319!5.55e-13!43;CL:0000221!2.32e-12!44;CL:0000133!2.32e-12!44;CL:0000393!1.38e-09!39;CL:0000211!1.38e-09!39;CL:0000055!3.06e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.45e-36,23;CL:0000337,2.45e-36,23;CL:0000540,3.23e-24,33;CL:0000047,3.23e-24,33;CL:0000031,3.23e-24,33;CL:0000404,3.23e-24,33;CL:0002319,6.12e-20,43;CL:0000393,6.31e-20,39;CL:0000211,6.31e-20,39;CL:0000221,2.13e-19,44;CL:0000133,2.13e-19,44;CL:0002321,9.25e-11,70;CL:0000120,1.03e-10,3;CL:0002612,1.96e-10,3;CL:0002614,9.17e-10,3;CL:0002613,1.05e-09,3;CL:0002610,1.94e-09,3;CL:0002611,9.26e-08,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.35e-27!73;UBERON:0005743!4.35e-27!73;UBERON:0000073!1.27e-25!75;UBERON:0001016!1.27e-25!75;UBERON:0004121!6.26e-22!102;UBERON:0000924!6.26e-22!102;UBERON:0006601!6.26e-22!102;UBERON:0001049!1.85e-20!52;UBERON:0005068!1.85e-20!52;UBERON:0006241!1.85e-20!52;UBERON:0007135!1.85e-20!52;UBERON:0002346!1.33e-19!71;UBERON:0003075!1.33e-19!71;UBERON:0007284!1.33e-19!71;UBERON:0000955!1.70e-18!50;UBERON:0006238!1.70e-18!50;UBERON:0002616!7.71e-18!49;UBERON:0000033!8.02e-18!63;UBERON:0002020!1.93e-15!34;UBERON:0003056!2.22e-14!49;UBERON:0003080!2.66e-13!40;UBERON:0002780!1.30e-12!39;UBERON:0001890!1.30e-12!39;UBERON:0006240!1.30e-12!39;UBERON:0002791!1.58e-11!29;UBERON:0003528!1.58e-11!29;UBERON:0001893!1.58e-11!29;UBERON:0007811!2.17e-08!86;UBERON:0003076!2.97e-08!12;UBERON:0003057!2.97e-08!12;UBERON:0000153!7.95e-08!94;UBERON:0002420!2.77e-07!8;UBERON:0007245!2.77e-07!8;UBERON:0010009!2.77e-07!8;UBERON:0010011!2.77e-07!8;UBERON:0000454!2.77e-07!8 | |ontology_enrichment_uberon=UBERON:0001017!4.35e-27!73;UBERON:0005743!4.35e-27!73;UBERON:0000073!1.27e-25!75;UBERON:0001016!1.27e-25!75;UBERON:0004121!6.26e-22!102;UBERON:0000924!6.26e-22!102;UBERON:0006601!6.26e-22!102;UBERON:0001049!1.85e-20!52;UBERON:0005068!1.85e-20!52;UBERON:0006241!1.85e-20!52;UBERON:0007135!1.85e-20!52;UBERON:0002346!1.33e-19!71;UBERON:0003075!1.33e-19!71;UBERON:0007284!1.33e-19!71;UBERON:0000955!1.70e-18!50;UBERON:0006238!1.70e-18!50;UBERON:0002616!7.71e-18!49;UBERON:0000033!8.02e-18!63;UBERON:0002020!1.93e-15!34;UBERON:0003056!2.22e-14!49;UBERON:0003080!2.66e-13!40;UBERON:0002780!1.30e-12!39;UBERON:0001890!1.30e-12!39;UBERON:0006240!1.30e-12!39;UBERON:0002791!1.58e-11!29;UBERON:0003528!1.58e-11!29;UBERON:0001893!1.58e-11!29;UBERON:0007811!2.17e-08!86;UBERON:0003076!2.97e-08!12;UBERON:0003057!2.97e-08!12;UBERON:0000153!7.95e-08!94;UBERON:0002420!2.77e-07!8;UBERON:0007245!2.77e-07!8;UBERON:0010009!2.77e-07!8;UBERON:0010011!2.77e-07!8;UBERON:0000454!2.77e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.99e-30,73;UBERON:0001016,2.62e-29,75;UBERON:0000073,1.23e-27,54;UBERON:0001049,6.88e-24,52;UBERON:0005068,6.88e-24,52;UBERON:0006241,6.88e-24,52;UBERON:0007135,6.88e-24,52;UBERON:0002420,1.69e-22,8;UBERON:0007245,1.69e-22,8;UBERON:0010009,1.69e-22,8;UBERON:0010011,1.69e-22,8;UBERON:0000454,1.69e-22,8;UBERON:0002020,2.57e-22,34;UBERON:0004121,4.71e-22,95;UBERON:0000924,4.71e-22,95;UBERON:0006601,4.71e-22,95;UBERON:0003076,4.20e-20,12;UBERON:0003057,4.20e-20,12;UBERON:0002240,2.53e-19,6;UBERON:0005174,2.53e-19,6;UBERON:0001137,2.53e-19,6;UBERON:0002346,1.46e-18,64;UBERON:0003075,1.46e-18,64;UBERON:0007284,1.46e-18,64;UBERON:0001948,1.49e-16,5;UBERON:0002315,1.49e-16,5;UBERON:0010371,1.03e-15,73;UBERON:0000369,2.47e-14,5;UBERON:0002435,2.47e-14,5;UBERON:0000204,2.47e-14,5;UBERON:0010082,2.47e-14,5;UBERON:0002616,4.43e-13,46;UBERON:0000955,9.88e-13,47;UBERON:0006238,9.88e-13,47;UBERON:0002950,1.92e-12,4;UBERON:0001891,1.92e-12,4;UBERON:0009616,1.92e-12,4;UBERON:0010286,1.92e-12,4;UBERON:0003528,3.35e-12,29;UBERON:0002791,3.35e-12,29;UBERON:0001893,3.35e-12,29;UBERON:0010314,1.57e-11,92;UBERON:0002257,1.96e-10,3;UBERON:0003080,8.25e-10,40;UBERON:0002038,9.17e-10,3;UBERON:0009663,9.17e-10,3;UBERON:0009661,9.17e-10,3;UBERON:0000125,9.17e-10,3;UBERON:0002308,9.17e-10,3;UBERON:0004684,1.94e-09,3;UBERON:0002275,1.94e-09,3;UBERON:0002780,1.73e-08,39;UBERON:0001890,1.73e-08,39;UBERON:0006240,1.73e-08,39;UBERON:0000025,1.98e-08,114;UBERON:0011216,4.67e-08,194;UBERON:0002256,9.26e-08,2;UBERON:0004111,1.40e-07,122;UBERON:0003056,1.51e-07,49;UBERON:0001896,9.50e-07,2;UBERON:0002298,9.50e-07,2;UBERON:0005290,9.50e-07,2;UBERON:0010096,9.50e-07,2 | |||
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| ||
|short_description=p8@Nova1 | |short_description=p8@Nova1 | ||
}} | }} |
Revision as of 16:28, 13 November 2012
Short description: | p8@Nova1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Nova1_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -469bp_to_ENSMUST00000021438, NM_021361, uc007nmd.2, uc007nme.2_5end |
EntrezGene: | Nova1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.45e-36 | 23 |
neuroblast (sensu Vertebrata) | 2.45e-36 | 23 |
neuron | 3.23e-24 | 33 |
neuronal stem cell | 3.23e-24 | 33 |
neuroblast | 3.23e-24 | 33 |
electrically signaling cell | 3.23e-24 | 33 |
neural cell | 6.12e-20 | 43 |
electrically responsive cell | 6.31e-20 | 39 |
electrically active cell | 6.31e-20 | 39 |
ectodermal cell | 2.13e-19 | 44 |
neurectodermal cell | 2.13e-19 | 44 |
embryonic cell | 9.25e-11 | 70 |
granule cell | 1.03e-10 | 3 |
neuron of the ventral spinal cord | 1.96e-10 | 3 |
neuron of the substantia nigra | 9.17e-10 | 3 |
striatum neuron | 1.05e-09 | 3 |
raphe nuclei neuron | 1.94e-09 | 3 |
neuron of the dorsal spinal cord | 9.26e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.