FFCP PHASE2:Mm9::chr18:37975098..37975121,+
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| Short description: | p10@Pcdhga11, p10@Pcdhga12, p10@Pcdhga3, p10@Pcdhga8, p10@Pcdhga9, p10@Pcdhgb6, p10@Pcdhgc3, p10@Pcdhgc4, p10@Pcdhgc5 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_10_at_Pcdhga11_5end, CAGE_peak_10_at_Pcdhga12_5end, CAGE_peak_10_at_Pcdhga3_5end, CAGE_peak_10_at_Pcdhga8_5end, CAGE_peak_10_at_Pcdhga9_5end, CAGE_peak_10_at_Pcdhgb6_5end, CAGE_peak_10_at_Pcdhgc3_5end, CAGE_peak_10_at_Pcdhgc4_5end, CAGE_peak_10_at_Pcdhgc5_5end |
| Coexpression cluster: | MCL_coexpression_mm9:87 |
| Association with transcript: | 365bp_to_ENSMUST00000066140, NM_033582, uc008erf.1_5end |
| EntrezGene: | 93703,93706,93707,93708,93711,93716,93717,93723,93724 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
| Sample | p10@Pcdhga11p10@Pcdhga12p10@Pcdhga3p10@Pcdhga8p10@Pcdhga9p10@Pcdhgb6p10@Pcdhgc3p10@Pcdhgc4p10@Pcdhgc5 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.29e-15 | 23 |
| neuroblast (sensu Vertebrata) | 1.29e-15 | 23 |
| neuron | 7.77e-09 | 33 |
| neuronal stem cell | 7.77e-09 | 33 |
| neuroblast | 7.77e-09 | 33 |
| electrically signaling cell | 7.77e-09 | 33 |
| neural cell | 8.84e-07 | 43 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 2.77e-27 | 54 |
| neural tube | 3.30e-25 | 52 |
| neural rod | 3.30e-25 | 52 |
| future spinal cord | 3.30e-25 | 52 |
| neural keel | 3.30e-25 | 52 |
| neurectoderm | 2.07e-24 | 64 |
| neural plate | 2.07e-24 | 64 |
| presumptive neural plate | 2.07e-24 | 64 |
| central nervous system | 4.29e-24 | 73 |
| nervous system | 5.28e-23 | 75 |
Showing 1 to 10 of 43 entries
