FFCP PHASE2:Hg19::chr2:241937787..241937803,+
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| Short description: | p5@SNED1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_SNED1_5end |
| Coexpression cluster: | C1156_Nucleus_Anulus_Mesenchymal_tenocyte_Pericytes_mesenchymal_Synoviocyte |
| Association with transcript: | -451bp_to_ENST00000310397, ENST00000342631, ENST00000401884, ENST00000405547, NM_001080437, uc002wah.1_5end |
| EntrezGene: | SNED1 |
| HGNC: | 24696 |
| UniProt: | Q8TER0B5MEF5 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p5@SNED1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| nucleus pulposus cell of intervertebral disc | 5.91e-16 | 3 |
| annulus pulposus cell | 2.98e-11 | 2 |
| central nervous system pericyte | 3.64e-11 | 2 |
| fibroblast of choroid plexus | 5.08e-10 | 2 |
| fibroblast of gingiva | 5.04e-09 | 5 |
| fibrocyte | 2.04e-07 | 3 |
| tendon cell | 2.04e-07 | 3 |
| synovial cell | 3.83e-07 | 3 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| articulation | 1.30e-29 | 8 |
| skeletal joint | 1.30e-29 | 8 |
| articular system | 1.30e-29 | 8 |
| intervertebral cartilage | 1.94e-25 | 5 |
| symphysis | 1.94e-25 | 5 |
| nonsynovial joint | 1.94e-25 | 5 |
| fibrous joint | 1.94e-25 | 5 |
| cartilaginous joint | 1.94e-25 | 5 |
| developing mesenchymal condensation | 1.94e-25 | 5 |
| pre-cartilage condensation | 1.94e-25 | 5 |
Showing 1 to 10 of 39 entries
