CL:0002504
From FANTOM5_SSTAR
Name: | enteric smooth muscle cell |
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Namespace: | FANTOM |
Definition: | "A smooth muscle cell of the intestine." [GOC:tfm] |
Synonyms: | "intestinal smooth muscle cell" EXACT [] |
Created by: | tmeehan |
Creation date: | 2011-01-17T03:39:38Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000192(smooth muscle cell) |
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part_of: | UBERON:0000160(intestine) |
Children
is a: | CL:1000279 (smooth muscle cell of large intestine) |
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derives from: | FF:0000180 (human smooth muscle cell of intestine sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11239-116D6 (Smooth Muscle Cells - Colonic, donor1)
- 11320-117D6 (Smooth Muscle Cells - Colonic, donor2)
- 11396-118D1 (Smooth Muscle Cells - Colonic, donor3)
- 11509-119G6 (Smooth Muscle Cells - Intestinal, donor1)
- 11589-120G5
- 11670-122G5
Mouse (Mus musculus)
- 11239-116D6 (Smooth Muscle Cells - Colonic, donor1)
- 11320-117D6 (Smooth Muscle Cells - Colonic, donor2)
- 11396-118D1 (Smooth Muscle Cells - Colonic, donor3)
- 11509-119G6 (Smooth Muscle Cells - Intestinal, donor1)
- 11589-120G5
- 11670-122G5
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002504 (enteric smooth muscle cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data