FFCP PHASE2:Mm9::chr2:177927780..177927804,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:74189 |HGNC= |MCL_coexpression_id=1 |TSSclassifier=NA |UniProt=uniprot:Q8BYK5,uniprot:Q6KCA9 |association_with_tran...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=74189 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q8BYK5,Q6KCA9 | ||
|association_with_transcript=0bp_to_ENSMUST00000103065,NM_001007154,uc008ohm.2_5end | |association_with_transcript=0bp_to_ENSMUST00000103065,NM_001007154,uc008ohm.2_5end | ||
|cluster_id=chr2:177927780..177927804,+ | |cluster_id=chr2:177927780..177927804,+ |
Latest revision as of 07:02, 26 September 2015
Short description: | p4@Phactr3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Phactr3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000103065, NM_001007154, uc008ohm.2_5end |
EntrezGene: | Phactr3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@Phactr3 |
---|
0
5
10
15
20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.71e-10 | 23 |
neuroblast (sensu Vertebrata) | 8.71e-10 | 23 |
raphe nuclei neuron | 5.35e-09 | 3 |
neuron of the substantia nigra | 3.67e-08 | 3 |
neuron of the dorsal spinal cord | 5.18e-07 | 2 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.78e-39 | 54 |
neural tube | 4.47e-35 | 52 |
neural rod | 4.47e-35 | 52 |
future spinal cord | 4.47e-35 | 52 |
neural keel | 4.47e-35 | 52 |
central nervous system | 2.54e-32 | 73 |
nervous system | 2.69e-31 | 75 |
brain | 5.05e-28 | 47 |
future brain | 5.05e-28 | 47 |
neurectoderm | 2.04e-27 | 64 |
Showing 1 to 10 of 64 entries