FFCP PHASE2:Mm9::chr19:38470290..38470307,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:240660 |HGNC= |MCL_coexpression_id=24 |TSSclassifier=NA |UniProt=uniprot:Q8BY79,uniprot:Q8BMM7 |association_with_tr...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=240660 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |MCL_coexpression_id=24 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q8BY79,Q8BMM7 | ||
|association_with_transcript=-162bp_to_ENSMUST00000054098,NM_175507,uc008hjm.1,uc008hjn.1,uc012blh.1_5end | |association_with_transcript=-162bp_to_ENSMUST00000054098,NM_175507,uc008hjm.1,uc008hjn.1,uc012blh.1_5end | ||
|cluster_id=chr19:38470290..38470307,+ | |cluster_id=chr19:38470290..38470307,+ | ||
Latest revision as of 16:59, 25 September 2015
| Short description: | p5@Tmem20 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Tmem20_5end |
| Coexpression cluster: | MCL_coexpression_mm9:24 |
| Association with transcript: | -162bp_to_ENSMUST00000054098, NM_175507, uc008hjm.1, uc008hjn.1, uc012blh.1_5end |
| EntrezGene: | Tmem20 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p5@Tmem20 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| brush border epithelial cell | 3.63e-17 | 6 |
| gut absorptive cell | 3.63e-17 | 6 |
| enterocyte | 3.63e-17 | 6 |
| intestinal epithelial cell | 1.02e-15 | 9 |
| epithelial cell of alimentary canal | 1.02e-15 | 9 |
| columnar/cuboidal epithelial cell | 1.10e-14 | 7 |
| M cell of gut | 7.18e-13 | 3 |
| epithelial cell | 8.92e-12 | 25 |
| endo-epithelial cell | 3.24e-09 | 15 |
| endodermal cell | 9.08e-07 | 20 |
Showing 1 to 10 of 10 entries
| Ontology term | p-value | n |
|---|---|---|
| mucosa | 3.19e-36 | 15 |
| intestinal mucosa | 3.49e-29 | 13 |
| wall of intestine | 3.49e-29 | 13 |
| gastrointestinal system mucosa | 3.49e-29 | 13 |
| intestine | 1.33e-25 | 31 |
| organ component layer | 7.23e-22 | 24 |
| gastrointestinal system | 5.14e-21 | 47 |
| epithelium of mucosa | 1.02e-15 | 9 |
| gastrointestinal system epithelium | 1.02e-15 | 9 |
| intestinal epithelium | 1.02e-15 | 9 |
Showing 1 to 10 of 26 entries
