FFCP PHASE1:Hg19::chr21:42880002..42880042,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11876 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9J5Y1 | ||
|association_with_transcript=0bp_to_ENST00000424093,ENST00000463138_5end | |association_with_transcript=0bp_to_ENST00000424093,ENST00000463138_5end | ||
|cluster_id=chr21:42880002..42880042,- | |cluster_id=chr21:42880002..42880042,- |
Latest revision as of 13:20, 18 September 2015
Short description: | p2@TMPRSS2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMPRSS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000424093, ENST00000463138_5end |
EntrezGene: | TMPRSS2 |
HGNC: | 11876 |
UniProt: | C9J5Y1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@TMPRSS2 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.35e-10 | 5 |
germ line cell | 5.78e-08 | 7 |
germ cell | 5.78e-08 | 7 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 1.44e-24 | 118 |
digestive system | 1.27e-22 | 145 |
digestive tract | 1.27e-22 | 145 |
primitive gut | 1.27e-22 | 145 |
endoderm-derived structure | 2.08e-20 | 160 |
endoderm | 2.08e-20 | 160 |
presumptive endoderm | 2.08e-20 | 160 |
gastrointestinal system | 2.06e-15 | 25 |
intestine | 2.01e-14 | 17 |
endo-epithelium | 1.55e-11 | 82 |
Showing 1 to 10 of 25 entries
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.41e-09 | 106 |
adenocarcinoma | 1.38e-07 | 25 |
Showing 1 to 2 of 2 entries