FFCP PHASE1:Mm9::chr5:129459178..129459206,-: Difference between revisions
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{{FFCP|EntrezGene=231760|HGNC=|MCL_coexpression_id=2|UniProt=Q80U40,D3YXR8|association_with_transcript=30bp_to_ENSMUST00000031370,ENSMUST00000111346,NM_001081388,uc008zsl.1,uc008zsm.1,uc012edx.1_5end|description=CAGE_peak_2_at_Rimbp2_5end|id=chr5:129459178..129459206,-|ontology_enrichment_celltype=CL:0000117!7.33e-15!23;CL:0000337!7.33e-15!23;CL:0000540!2.05e-14!33;CL:0000047!2.05e-14!33;CL:0000031!2.05e-14!33;CL:0000404!2.05e-14!33;CL:0000393!4.41e-10!39;CL:0000211!4.41e-10!39;CL:0002319!5.22e-10!43;CL:0000221!6.18e-10!44;CL:0000133!6.18e-10!44;CL:0000055!8.18e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.65e-25,23;CL:0000337,8.65e-25,23;CL:0000540,2.79e-18,33;CL:0000047,2.79e-18,33;CL:0000031,2.79e-18,33;CL:0000404,2.79e-18,33;CL:0000393,2.71e-14,39;CL:0000211,2.71e-14,39;CL:0002319,2.82e-12,43;CL:0000221,7.83e-12,44;CL:0000133,7.83e-12,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.90e-29!71;UBERON:0003075!1.90e-29!71;UBERON:0007284!1.90e-29!71;UBERON:0001017!2.72e-29!73;UBERON:0005743!2.72e-29!73;UBERON:0000073!2.78e-28!75;UBERON:0001016!2.78e-28!75;UBERON:0004121!2.09e-26!102;UBERON:0000924!2.09e-26!102;UBERON:0006601!2.09e-26!102;UBERON:0001049!1.50e-24!52;UBERON:0005068!1.50e-24!52;UBERON:0006241!1.50e-24!52;UBERON:0007135!1.50e-24!52;UBERON:0000955!1.61e-23!50;UBERON:0006238!1.61e-23!50;UBERON:0000033!3.84e-23!63;UBERON:0003056!9.24e-23!49;UBERON:0002616!9.94e-23!49;UBERON:0003080!1.08e-20!40;UBERON:0002020!5.34e-20!34;UBERON:0002780!5.72e-20!39;UBERON:0001890!5.72e-20!39;UBERON:0006240!5.72e-20!39;UBERON:0002791!9.66e-17!29;UBERON:0003528!9.66e-17!29;UBERON:0001893!9.66e-17!29;UBERON:0000956!1.12e-11!21;UBERON:0001869!1.12e-11!21;UBERON:0000203!1.12e-11!21;UBERON:0007811!6.07e-11!86;UBERON:0002619!1.62e-09!17;UBERON:0002021!2.15e-09!10;UBERON:0000411!2.15e-09!10;UBERON:0001950!2.15e-09!10;UBERON:0000153!3.06e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.97e-40,54;UBERON:0001017,8.47e-38,73;UBERON:0002346,1.71e-37,64;UBERON:0003075,1.71e-37,64;UBERON:0007284,1.71e-37,64;UBERON:0001049,4.62e-37,52;UBERON:0005068,4.62e-37,52;UBERON:0006241,4.62e-37,52;UBERON:0007135,4.62e-37,52;UBERON:0001016,2.25e-36,75;UBERON:0002020,4.48e-35,34;UBERON:0003080,4.84e-32,40;UBERON:0000955,1.82e-31,47;UBERON:0006238,1.82e-31,47;UBERON:0010371,4.70e-31,73;UBERON:0002780,8.49e-31,39;UBERON:0001890,8.49e-31,39;UBERON:0006240,8.49e-31,39;UBERON:0003056,1.03e-30,49;UBERON:0004121,1.24e-30,95;UBERON:0000924,1.24e-30,95;UBERON:0006601,1.24e-30,95;UBERON:0002616,3.62e-30,46;UBERON:0003528,2.48e-29,29;UBERON:0002791,2.48e-29,29;UBERON:0001893,2.48e-29,29;UBERON:0010314,1.14e-22,92;UBERON:0000956,2.09e-20,21;UBERON:0001869,2.09e-20,21;UBERON:0000203,2.09e-20,21;UBERON:0002619,1.29e-16,17;UBERON:0002021,3.12e-15,10;UBERON:0000411,3.12e-15,10;UBERON:0001950,3.12e-15,10;UBERON:0000025,5.41e-10,114;UBERON:0002420,6.36e-10,8;UBERON:0007245,6.36e-10,8;UBERON:0010009,6.36e-10,8;UBERON:0010011,6.36e-10,8;UBERON:0000454,6.36e-10,8;UBERON:0004111,1.39e-08,122;UBERON:0002240,8.66e-08,6;UBERON:0005174,8.66e-08,6;UBERON:0001137,8.66e-08,6;UBERON:0000369,9.54e-07,5;UBERON:0002435,9.54e-07,5;UBERON:0001948,9.54e-07,5;UBERON:0002315,9.54e-07,5;UBERON:0000204,9.54e-07,5;UBERON:0010082,9.54e-07,5|phase1_expression=0,0,0,0,0,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,4.24864567805155,6.34789175126439,4.43681982454325,0,0,0,0,0,0.299600110518405,0.384218305321555,2.17748185847803,2.16009501330705,1.89292465216244,6.28432165688368,4.19650227808066,2.20483438586917,1.24599112323707,2.75765635983006,13.2139057199266,10.5980490610706,9.21639199537461,3.82470234417562,4.48289453651807,4.68822033501084,3.90856198601933,5.06486349028512,6.87592114995646,6.18720029494702,7.40332740155335,2.98239113320481,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.593768556259299,1.04091196059682,0.608930956624282,0.691846491768175,0.60289056221049,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,7.63932260964596,18.3000241127451,3.26701315493447,30.0716073932638,21.2243829584174,10.1816141834184,12.9793010454206,0,0,0,0.210441855886474,0.260240885925407,0.459804208866946,0.180062129805349,1.20563854268572,1.36072998302656,0.896796041993948,2.34254311399322,2.84573707812917,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0.23674473558521,0.393528463494808,0.462801338662135,0,0,0,0,0,0,0,0,0,30.7023324903626,1.64647379806855,0,0,0.853153002140936,0.464473343720877,0.77320476793256,0.605050573870028,0.889512175379481,0,0.949058123089023,0.329397909448022,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0.342745537829186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,3.37156238974363,3.28192722458169,0,0,0.315508219416257,2.34263246577983,3.01592756825919,0.716906393857656,0,0.283076530788832,0.404810701674894,0.876767573733936,0.790575555893047,27.6336332122754,0,0,0,0.494910368917606,0,1.21390318077491,0.604647113929502,0.565815239267694,1.18120757152309,1.22974059177571,1.29214146584111,0.727067458955011,1.78248689192361,0.316036757935816,0,0,6.46835250932197,0.540183282093931,0.129358683782755,0.643011105094777,1.06404140185364,0.178368817602071,1.64549020602121,2.43571959291679,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0.291480836629851,4.63563255026274,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0.117357238645754,2.3436789271911,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.6153955667483,48.3341498332536,38.3839994004396,31.7928387335822,43.8452812653211,41.5466643564335,32.4010800111267,40.0785870869556,42.5953864445152,38.3142630696347,0.207574695168353,0.798049746802062,0.512200817262403,0.972426868273176,1.88651846365184,1.2869045591501,0.666740183404846,0.824140228955577,0.962757628775446,1.01078884705519,0.25347929989024,0.943131706930381,0.468207537349412,1.21647789569252,0.574354689556133,0.952587382566147,1.27472758539341,0.38581844092741,0.824171801606613,1.32479028120958,0.685738504770831,1.06485483695602,0.715308569841963,0.872078499793971,1.2234219453993,0.846146078916765,0.73171189149109,1.57841826862706,1.08643291076689,1.12228454331548,0.474540072496697,0.689531376628944,0.409231043169689,0.77468420592983,0.964533054905707,1.24905288968973,0.233931608445408,0.859484216193193,0.191288332068843,0,0|short_description=p2@Rimbp2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:231760 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80U40,uniprot:D3YXR8 | |||
|association_with_transcript=30bp_to_ENSMUST00000031370,ENSMUST00000111346,NM_001081388,uc008zsl.1,uc008zsm.1,uc012edx.1_5end | |||
|cluster_id=chr5:129459178..129459206,- | |||
|description=CAGE_peak_2_at_Rimbp2_5end | |||
|id=chr5:129459178..129459206,- | |||
|ontology_enrichment_celltype=CL:0000117!7.33e-15!23;CL:0000337!7.33e-15!23;CL:0000540!2.05e-14!33;CL:0000047!2.05e-14!33;CL:0000031!2.05e-14!33;CL:0000404!2.05e-14!33;CL:0000393!4.41e-10!39;CL:0000211!4.41e-10!39;CL:0002319!5.22e-10!43;CL:0000221!6.18e-10!44;CL:0000133!6.18e-10!44;CL:0000055!8.18e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.65e-25,23;CL:0000337,8.65e-25,23;CL:0000540,2.79e-18,33;CL:0000047,2.79e-18,33;CL:0000031,2.79e-18,33;CL:0000404,2.79e-18,33;CL:0000393,2.71e-14,39;CL:0000211,2.71e-14,39;CL:0002319,2.82e-12,43;CL:0000221,7.83e-12,44;CL:0000133,7.83e-12,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.90e-29!71;UBERON:0003075!1.90e-29!71;UBERON:0007284!1.90e-29!71;UBERON:0001017!2.72e-29!73;UBERON:0005743!2.72e-29!73;UBERON:0000073!2.78e-28!75;UBERON:0001016!2.78e-28!75;UBERON:0004121!2.09e-26!102;UBERON:0000924!2.09e-26!102;UBERON:0006601!2.09e-26!102;UBERON:0001049!1.50e-24!52;UBERON:0005068!1.50e-24!52;UBERON:0006241!1.50e-24!52;UBERON:0007135!1.50e-24!52;UBERON:0000955!1.61e-23!50;UBERON:0006238!1.61e-23!50;UBERON:0000033!3.84e-23!63;UBERON:0003056!9.24e-23!49;UBERON:0002616!9.94e-23!49;UBERON:0003080!1.08e-20!40;UBERON:0002020!5.34e-20!34;UBERON:0002780!5.72e-20!39;UBERON:0001890!5.72e-20!39;UBERON:0006240!5.72e-20!39;UBERON:0002791!9.66e-17!29;UBERON:0003528!9.66e-17!29;UBERON:0001893!9.66e-17!29;UBERON:0000956!1.12e-11!21;UBERON:0001869!1.12e-11!21;UBERON:0000203!1.12e-11!21;UBERON:0007811!6.07e-11!86;UBERON:0002619!1.62e-09!17;UBERON:0002021!2.15e-09!10;UBERON:0000411!2.15e-09!10;UBERON:0001950!2.15e-09!10;UBERON:0000153!3.06e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.97e-40,54;UBERON:0001017,8.47e-38,73;UBERON:0002346,1.71e-37,64;UBERON:0003075,1.71e-37,64;UBERON:0007284,1.71e-37,64;UBERON:0001049,4.62e-37,52;UBERON:0005068,4.62e-37,52;UBERON:0006241,4.62e-37,52;UBERON:0007135,4.62e-37,52;UBERON:0001016,2.25e-36,75;UBERON:0002020,4.48e-35,34;UBERON:0003080,4.84e-32,40;UBERON:0000955,1.82e-31,47;UBERON:0006238,1.82e-31,47;UBERON:0010371,4.70e-31,73;UBERON:0002780,8.49e-31,39;UBERON:0001890,8.49e-31,39;UBERON:0006240,8.49e-31,39;UBERON:0003056,1.03e-30,49;UBERON:0004121,1.24e-30,95;UBERON:0000924,1.24e-30,95;UBERON:0006601,1.24e-30,95;UBERON:0002616,3.62e-30,46;UBERON:0003528,2.48e-29,29;UBERON:0002791,2.48e-29,29;UBERON:0001893,2.48e-29,29;UBERON:0010314,1.14e-22,92;UBERON:0000956,2.09e-20,21;UBERON:0001869,2.09e-20,21;UBERON:0000203,2.09e-20,21;UBERON:0002619,1.29e-16,17;UBERON:0002021,3.12e-15,10;UBERON:0000411,3.12e-15,10;UBERON:0001950,3.12e-15,10;UBERON:0000025,5.41e-10,114;UBERON:0002420,6.36e-10,8;UBERON:0007245,6.36e-10,8;UBERON:0010009,6.36e-10,8;UBERON:0010011,6.36e-10,8;UBERON:0000454,6.36e-10,8;UBERON:0004111,1.39e-08,122;UBERON:0002240,8.66e-08,6;UBERON:0005174,8.66e-08,6;UBERON:0001137,8.66e-08,6;UBERON:0000369,9.54e-07,5;UBERON:0002435,9.54e-07,5;UBERON:0001948,9.54e-07,5;UBERON:0002315,9.54e-07,5;UBERON:0000204,9.54e-07,5;UBERON:0010082,9.54e-07,5 | |||
|phase1_expression=0,0,0,0,0,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,4.24864567805155,6.34789175126439,4.43681982454325,0,0,0,0,0,0.299600110518405,0.384218305321555,2.17748185847803,2.16009501330705,1.89292465216244,6.28432165688368,4.19650227808066,2.20483438586917,1.24599112323707,2.75765635983006,13.2139057199266,10.5980490610706,9.21639199537461,3.82470234417562,4.48289453651807,4.68822033501084,3.90856198601933,5.06486349028512,6.87592114995646,6.18720029494702,7.40332740155335,2.98239113320481,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.593768556259299,1.04091196059682,0.608930956624282,0.691846491768175,0.60289056221049,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,7.63932260964596,18.3000241127451,3.26701315493447,30.0716073932638,21.2243829584174,10.1816141834184,12.9793010454206,0,0,0,0.210441855886474,0.260240885925407,0.459804208866946,0.180062129805349,1.20563854268572,1.36072998302656,0.896796041993948,2.34254311399322,2.84573707812917,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0.23674473558521,0.393528463494808,0.462801338662135,0,0,0,0,0,0,0,0,0,30.7023324903626,1.64647379806855,0,0,0.853153002140936,0.464473343720877,0.77320476793256,0.605050573870028,0.889512175379481,0,0.949058123089023,0.329397909448022,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0.342745537829186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,3.37156238974363,3.28192722458169,0,0,0.315508219416257,2.34263246577983,3.01592756825919,0.716906393857656,0,0.283076530788832,0.404810701674894,0.876767573733936,0.790575555893047,27.6336332122754,0,0,0,0.494910368917606,0,1.21390318077491,0.604647113929502,0.565815239267694,1.18120757152309,1.22974059177571,1.29214146584111,0.727067458955011,1.78248689192361,0.316036757935816,0,0,6.46835250932197,0.540183282093931,0.129358683782755,0.643011105094777,1.06404140185364,0.178368817602071,1.64549020602121,2.43571959291679,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0.291480836629851,4.63563255026274,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0.117357238645754,2.3436789271911,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.6153955667483,48.3341498332536,38.3839994004396,31.7928387335822,43.8452812653211,41.5466643564335,32.4010800111267,40.0785870869556,42.5953864445152,38.3142630696347,0.207574695168353,0.798049746802062,0.512200817262403,0.972426868273176,1.88651846365184,1.2869045591501,0.666740183404846,0.824140228955577,0.962757628775446,1.01078884705519,0.25347929989024,0.943131706930381,0.468207537349412,1.21647789569252,0.574354689556133,0.952587382566147,1.27472758539341,0.38581844092741,0.824171801606613,1.32479028120958,0.685738504770831,1.06485483695602,0.715308569841963,0.872078499793971,1.2234219453993,0.846146078916765,0.73171189149109,1.57841826862706,1.08643291076689,1.12228454331548,0.474540072496697,0.689531376628944,0.409231043169689,0.77468420592983,0.964533054905707,1.24905288968973,0.233931608445408,0.859484216193193,0.191288332068843,0,0 | |||
|short_description=p2@Rimbp2 | |||
}} |
Revision as of 08:32, 6 August 2015
Short description: | p2@Rimbp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rimbp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 30bp_to_ENSMUST00000031370, ENSMUST00000111346, NM_001081388, uc008zsl.1, uc008zsm.1, uc012edx.1_5end |
EntrezGene: | 231760 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.65e-25 | 23 |
neuroblast (sensu Vertebrata) | 8.65e-25 | 23 |
neuron | 2.79e-18 | 33 |
neuronal stem cell | 2.79e-18 | 33 |
neuroblast | 2.79e-18 | 33 |
electrically signaling cell | 2.79e-18 | 33 |
electrically responsive cell | 2.71e-14 | 39 |
electrically active cell | 2.71e-14 | 39 |
neural cell | 2.82e-12 | 43 |
ectodermal cell | 7.83e-12 | 44 |
neurectodermal cell | 7.83e-12 | 44 |