FFCP PHASE1:Mm9::chr16:33799053..33799075,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=140|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:33799053..33799075,+|id=chr16:33799053..33799075,+|ontology_enrichment_celltype=CL:0002563!1.32e-12!9;CL:0002251!1.32e-12!9;CL:0000239!2.10e-09!6;CL:0000677!2.10e-09!6;CL:0000212!2.10e-09!6;CL:0000584!2.10e-09!6;CL:0000075!6.65e-08!7|ontology_enrichment_celltype_v019_2=CL:0000239,3.39e-15,6;CL:0000677,3.39e-15,6;CL:0000584,3.39e-15,6;CL:0002563,4.09e-13,9;CL:0002251,4.09e-13,9;CL:0000075,6.21e-13,7;CL:0000066,2.14e-08,25;CL:0000682,3.05e-08,3;CL:0002076,1.76e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.18e-24!43;UBERON:0000344!4.54e-21!15;UBERON:0005409!6.96e-21!59;UBERON:0001242!1.89e-18!13;UBERON:0000060!1.89e-18!13;UBERON:0001262!1.89e-18!13;UBERON:0004786!1.89e-18!13;UBERON:0004923!7.27e-15!24;UBERON:0003350!1.32e-12!9;UBERON:0004808!1.32e-12!9;UBERON:0001277!1.32e-12!9;UBERON:0000485!6.48e-10!11;UBERON:0004119!1.50e-08!130;UBERON:0000925!1.50e-08!130;UBERON:0006595!1.50e-08!130;UBERON:0001007!3.25e-08!128;UBERON:0001555!3.25e-08!128;UBERON:0007026!3.25e-08!128;UBERON:0004921!4.40e-07!126;UBERON:0004185!4.40e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.42e-53,31;UBERON:0005409,4.43e-36,47;UBERON:0000344,3.43e-27,15;UBERON:0001242,9.87e-23,13;UBERON:0001262,9.87e-23,13;UBERON:0004786,9.87e-23,13;UBERON:0004923,1.75e-18,24;UBERON:0001007,1.96e-13,116;UBERON:0001555,1.96e-13,116;UBERON:0007026,1.96e-13,116;UBERON:0003350,4.09e-13,9;UBERON:0004808,4.09e-13,9;UBERON:0001277,4.09e-13,9;UBERON:0004119,4.21e-13,118;UBERON:0000925,4.21e-13,118;UBERON:0006595,4.21e-13,118;UBERON:0002108,1.46e-11,4;UBERON:0004921,2.05e-11,114;UBERON:0000485,1.49e-10,11;UBERON:0000331,6.12e-09,3;UBERON:0002116,6.12e-09,3;UBERON:0001204,6.12e-09,3;UBERON:0001168,6.12e-09,3|phase1_expression=0,4.18770489167233,6.82498859084304,5.14189159221611,4.50806156951712,1.17515490338323,3.97141489012394,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,4.63978026100879,2.2940928106717,2.8711598205751,3.87685796543167,4.52489588640367,7.60093677825496,4.78857246543868,4.8780712344167,0,0,0,1.44425809875637,0.664938581433969,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,3.72783522436244,0,0,19.9256503062701,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.3985280345094,12.4291766331866,0,0,0,1.81515172161008,1.11189021922435,1.71203063501303,21.353807769503,2.9645811850322,2.5133520880027,5.96869416123452,3.70431765526328,24.268124033664,13.8328351919804,8.16479220342906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,15.1570035047522,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0,0,4.53652406521275,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0.824171801606613,0.147198920134397,0,0.177475806159338,0.238436189947321,0.436039249896986,0,0,0,0.263069711437843,0.271608227691724,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p@chr16:33799053..33799075,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=140 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:33799053..33799075,+ | |||
|description=CAGE_peak_at_chr16:33799053..33799075,+ | |||
|id=chr16:33799053..33799075,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.32e-12!9;CL:0002251!1.32e-12!9;CL:0000239!2.10e-09!6;CL:0000677!2.10e-09!6;CL:0000212!2.10e-09!6;CL:0000584!2.10e-09!6;CL:0000075!6.65e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.39e-15,6;CL:0000677,3.39e-15,6;CL:0000584,3.39e-15,6;CL:0002563,4.09e-13,9;CL:0002251,4.09e-13,9;CL:0000075,6.21e-13,7;CL:0000066,2.14e-08,25;CL:0000682,3.05e-08,3;CL:0002076,1.76e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.18e-24!43;UBERON:0000344!4.54e-21!15;UBERON:0005409!6.96e-21!59;UBERON:0001242!1.89e-18!13;UBERON:0000060!1.89e-18!13;UBERON:0001262!1.89e-18!13;UBERON:0004786!1.89e-18!13;UBERON:0004923!7.27e-15!24;UBERON:0003350!1.32e-12!9;UBERON:0004808!1.32e-12!9;UBERON:0001277!1.32e-12!9;UBERON:0000485!6.48e-10!11;UBERON:0004119!1.50e-08!130;UBERON:0000925!1.50e-08!130;UBERON:0006595!1.50e-08!130;UBERON:0001007!3.25e-08!128;UBERON:0001555!3.25e-08!128;UBERON:0007026!3.25e-08!128;UBERON:0004921!4.40e-07!126;UBERON:0004185!4.40e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.42e-53,31;UBERON:0005409,4.43e-36,47;UBERON:0000344,3.43e-27,15;UBERON:0001242,9.87e-23,13;UBERON:0001262,9.87e-23,13;UBERON:0004786,9.87e-23,13;UBERON:0004923,1.75e-18,24;UBERON:0001007,1.96e-13,116;UBERON:0001555,1.96e-13,116;UBERON:0007026,1.96e-13,116;UBERON:0003350,4.09e-13,9;UBERON:0004808,4.09e-13,9;UBERON:0001277,4.09e-13,9;UBERON:0004119,4.21e-13,118;UBERON:0000925,4.21e-13,118;UBERON:0006595,4.21e-13,118;UBERON:0002108,1.46e-11,4;UBERON:0004921,2.05e-11,114;UBERON:0000485,1.49e-10,11;UBERON:0000331,6.12e-09,3;UBERON:0002116,6.12e-09,3;UBERON:0001204,6.12e-09,3;UBERON:0001168,6.12e-09,3 | |||
|phase1_expression=0,4.18770489167233,6.82498859084304,5.14189159221611,4.50806156951712,1.17515490338323,3.97141489012394,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,4.63978026100879,2.2940928106717,2.8711598205751,3.87685796543167,4.52489588640367,7.60093677825496,4.78857246543868,4.8780712344167,0,0,0,1.44425809875637,0.664938581433969,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,3.72783522436244,0,0,19.9256503062701,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.3985280345094,12.4291766331866,0,0,0,1.81515172161008,1.11189021922435,1.71203063501303,21.353807769503,2.9645811850322,2.5133520880027,5.96869416123452,3.70431765526328,24.268124033664,13.8328351919804,8.16479220342906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,15.1570035047522,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0,0,4.53652406521275,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0.824171801606613,0.147198920134397,0,0.177475806159338,0.238436189947321,0.436039249896986,0,0,0,0.263069711437843,0.271608227691724,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr16:33799053..33799075,+ | |||
}} |
Latest revision as of 08:26, 6 August 2015
Short description: | p@chr16:33799053..33799075, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:33799053..33799075, + |
Coexpression cluster: | MCL_coexpression_mm9:140 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.39e-15 | 6 |
gut absorptive cell | 3.39e-15 | 6 |
enterocyte | 3.39e-15 | 6 |
intestinal epithelial cell | 4.09e-13 | 9 |
epithelial cell of alimentary canal | 4.09e-13 | 9 |
columnar/cuboidal epithelial cell | 6.21e-13 | 7 |
epithelial cell | 2.14e-08 | 25 |
M cell of gut | 3.05e-08 | 3 |
endo-epithelial cell | 1.76e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.42e-53 | 31 |
gastrointestinal system | 4.43e-36 | 47 |
mucosa | 3.43e-27 | 15 |
intestinal mucosa | 9.87e-23 | 13 |
wall of intestine | 9.87e-23 | 13 |
gastrointestinal system mucosa | 9.87e-23 | 13 |
organ component layer | 1.75e-18 | 24 |
digestive system | 1.96e-13 | 116 |
digestive tract | 1.96e-13 | 116 |
primitive gut | 1.96e-13 | 116 |
epithelium of mucosa | 4.09e-13 | 9 |
gastrointestinal system epithelium | 4.09e-13 | 9 |
intestinal epithelium | 4.09e-13 | 9 |
endoderm-derived structure | 4.21e-13 | 118 |
endoderm | 4.21e-13 | 118 |
presumptive endoderm | 4.21e-13 | 118 |
small intestine | 1.46e-11 | 4 |
subdivision of digestive tract | 2.05e-11 | 114 |
simple columnar epithelium | 1.49e-10 | 11 |
ileal mucosa | 6.12e-09 | 3 |
ileum | 6.12e-09 | 3 |
mucosa of small intestine | 6.12e-09 | 3 |
wall of small intestine | 6.12e-09 | 3 |