FFCP PHASE1:Mm9::chr16:31428831..31428841,+: Difference between revisions
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{{FFCP|EntrezGene=71911|HGNC=|UniProt=Q80XN0|association_with_transcript=0bp_to_ENSMUST00000115227,ENSMUST00000128286,NM_001122683,uc007yxj.2,uc007yxk.2_5end|description=CAGE_peak_5_at_Bdh1_5end|id=chr16:31428831..31428841,+|ontology_enrichment_celltype=CL:0000117!4.02e-11!23;CL:0000337!4.02e-11!23;CL:0000221!1.82e-10!44;CL:0000133!1.82e-10!44;CL:0002319!2.08e-10!43;CL:0000540!1.05e-07!33;CL:0000047!1.05e-07!33;CL:0000031!1.05e-07!33;CL:0000404!1.05e-07!33;CL:0002321!3.11e-07!70;CL:0000220!3.11e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,7.05e-19,23;CL:0000337,7.05e-19,23;CL:0002319,1.40e-15,43;CL:0000221,4.97e-15,44;CL:0000133,4.97e-15,44;CL:0002321,8.96e-15,70;CL:0000540,2.46e-12,33;CL:0000047,2.46e-12,33;CL:0000031,2.46e-12,33;CL:0000404,2.46e-12,33;CL:0002563,3.53e-10,9;CL:0002251,3.53e-10,9;CL:0000393,1.84e-09,39;CL:0000211,1.84e-09,39;CL:0000239,3.41e-07,6;CL:0000677,3.41e-07,6;CL:0000584,3.41e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.57e-18!75;UBERON:0001016!2.57e-18!75;UBERON:0001017!5.35e-18!73;UBERON:0005743!5.35e-18!73;UBERON:0002020!2.70e-17!34;UBERON:0001049!1.90e-15!52;UBERON:0005068!1.90e-15!52;UBERON:0006241!1.90e-15!52;UBERON:0007135!1.90e-15!52;UBERON:0002791!5.83e-14!29;UBERON:0003528!5.83e-14!29;UBERON:0001893!5.83e-14!29;UBERON:0000955!9.85e-14!50;UBERON:0006238!9.85e-14!50;UBERON:0002616!2.33e-13!49;UBERON:0004121!2.64e-13!102;UBERON:0000924!2.64e-13!102;UBERON:0006601!2.64e-13!102;UBERON:0000956!6.24e-12!21;UBERON:0001869!6.24e-12!21;UBERON:0000203!6.24e-12!21;UBERON:0000064!6.68e-12!99;UBERON:0000033!7.34e-11!63;UBERON:0003080!1.26e-10!40;UBERON:0002780!2.53e-10!39;UBERON:0001890!2.53e-10!39;UBERON:0006240!2.53e-10!39;UBERON:0002346!2.77e-10!71;UBERON:0003075!2.77e-10!71;UBERON:0007284!2.77e-10!71;UBERON:0002619!9.29e-10!17;UBERON:0003056!7.80e-09!49;UBERON:0000344!1.40e-07!15;UBERON:0007811!2.57e-07!86;UBERON:0002021!5.80e-07!10;UBERON:0000411!5.80e-07!10;UBERON:0001950!5.80e-07!10;UBERON:0001242!8.74e-07!13;UBERON:0000060!8.74e-07!13;UBERON:0001262!8.74e-07!13;UBERON:0004786!8.74e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.04e-27,73;UBERON:0001016,1.41e-26,75;UBERON:0002020,2.43e-26,34;UBERON:0000073,4.36e-26,54;UBERON:0001049,4.83e-23,52;UBERON:0005068,4.83e-23,52;UBERON:0006241,4.83e-23,52;UBERON:0007135,4.83e-23,52;UBERON:0003528,2.70e-20,29;UBERON:0002791,2.70e-20,29;UBERON:0001893,2.70e-20,29;UBERON:0000955,6.11e-19,47;UBERON:0006238,6.11e-19,47;UBERON:0002616,2.81e-18,46;UBERON:0004121,6.20e-18,95;UBERON:0000924,6.20e-18,95;UBERON:0006601,6.20e-18,95;UBERON:0002346,1.39e-16,64;UBERON:0003075,1.39e-16,64;UBERON:0007284,1.39e-16,64;UBERON:0011216,1.11e-15,194;UBERON:0000956,2.08e-15,21;UBERON:0001869,2.08e-15,21;UBERON:0000203,2.08e-15,21;UBERON:0003080,6.74e-15,40;UBERON:0002780,2.36e-14,39;UBERON:0001890,2.36e-14,39;UBERON:0006240,2.36e-14,39;UBERON:0010371,3.45e-13,73;UBERON:0002619,7.78e-13,17;UBERON:0000344,6.46e-11,15;UBERON:0003056,1.03e-10,49;UBERON:0000160,3.05e-10,31;UBERON:0003350,3.53e-10,9;UBERON:0004808,3.53e-10,9;UBERON:0001277,3.53e-10,9;UBERON:0002021,4.17e-10,10;UBERON:0000411,4.17e-10,10;UBERON:0001950,4.17e-10,10;UBERON:0001242,1.95e-09,13;UBERON:0001262,1.95e-09,13;UBERON:0004786,1.95e-09,13;UBERON:0003076,3.56e-09,12;UBERON:0003057,3.56e-09,12;UBERON:0010314,2.43e-08,92;UBERON:0000485,6.36e-08,11;UBERON:0001948,1.61e-07,5;UBERON:0002315,1.61e-07,5;UBERON:0005409,3.40e-07,47|phase1_expression=0,2.44282785347553,2.72999543633722,1.51232105653415,1.50268718983904,2.35030980676646,2.33612640595526,0.129123323441576,0.281577444303333,0.468129052643987,0.171217968225505,0.239316476986009,0.342401459862411,0.174840804837995,0,0.607425802169478,0,0,0.274228867211478,0,0.850432901510698,0.297872853602656,0.783599367416806,1.11994695955385,2.06468352960453,2.29692785646008,1.7230479846363,1.72376986148711,0.380046838912748,0.756090389279792,1.99557459589774,0,0,0,2.3108129580102,1.66234645358492,3.26670970019791,0,0,0,0,0,0,0,0,0,0,2.61630187656536,2.19686182734472,0.58328969722285,2.79972843250725,4.31257693094915,0,0.725362142011344,0,0,0,0,2.02316460859598,1.05798195854407,1.26766280701236,0.677689064138264,0.889294796111139,0,0,0,1.79760066311043,3.07374644257244,3.21437798156281,3.51015439662396,3.78584930432488,5.42736870367227,3.3130281142742,1.95985278743926,0.958454710182364,2.75765635983006,1.10115880999389,1.91531007127782,1.53606533256243,1.18697658957174,1.09785172322892,5.2091337055676,1.3959149950069,0,1.98637722109853,3.24091444021034,2.13557521198654,3.16879057903011,0.605809546665472,0.755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0.563373679106722,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.68510327831436,0,0,0,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,1.8850203613211,1.78819938646014,0,0,0,1.04853447583376,2.28750301409313,1.38219787324151,0.869121600961382,1.27857728665165,1.66230435647648,0.811206315338788,0.101839363850316,0.248813941220186,0.252722758433675,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0.640568601424249,0.281105173679186,0.776110112217047,0,0,0,0.219195732427575,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0.536825675041487,1.68231958851302,4.42489833230923,1.32167513193519,0.793351699990633,0.213288250535234,0,0.257734922644187,1.00841762311671,1.77902435075896,1.90225626112559,0.949058123089023,2.14108641141214,2.26201687920243,2.78539060857611,0.779856348476481,1.79763881730844,1.08069024937347,0.995706366271836,0,0.228497025219458,0,0.407302655690628,0.581857461502877,0.631222379012867,0.316182685621286,1.32849133181642,1.09899109488962,0.987177311374404,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0.983528546038072,0.827810238914197,1.12385412991454,2.22702204525186,0,0.504941854408746,0.94652465824877,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0,1.16902343164525,0.395287777946524,1.28528526568723,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0.922305443831782,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0.258717367565509,0,0,0.535106452806212,0.493647061806363,0,0,0.63549621259146,0.220528398054962,0.49465875882444,0,0.542816324353403,0.716234064018819,0.656563598980245,0.291480836629851,0.927126510052548,0.341741761595705,0.412773735926445,0.185194527369712,0.188368457004691,0,0.228778173206523,0.169978429993855,0,0,0,0,0,0.648032044930808,0.836353184057875,0.87345025498471,1.34864346384821,0.661227645802687,1.83229159388821,1.8146096260851,0,0.56369293868419,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0.314578033277133,0.724752362478018,0,0,0.405450430580328,0.410843828659309,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0.147689527174577,0.201932899896295,0.0762068066549998,0.201652370273681,0.292373642219257,0.192423683280659,0.233753804363138,0.680191150845634,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,6.7770221114048,4.60325236507177,4.58316410751517,3.09335728218638,1.37016503954128,3.0215755895588,2.70009000092722,2.2516060161211,0.906284817968409,2.07104124700728,0.31136204275253,0,0.341467211508268,0.486213434136588,0.838452650511929,0.919217542250071,0.666740183404846,0.206035057238894,0,0.252697211763798,1.01391719956096,0.754505365544305,0.37456602987953,0.448176066834085,0.689225627467359,0.952587382566147,0.115884325944855,0.578727661391115,0.412085900803307,0,0,0.177475806159338,0.715308569841963,0.436039249896986,0.470546902076653,0.338458431566706,0.73171189149109,0,0.407412341537585,0,0.355905054372522,0.788035859004508,0,0.77468420592983,0.771626443924566,0.999242311751784,0.701794825336225,0.214871054048298,0,0.882365676478062,0.231867835620421|short_description=p5@Bdh1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:71911 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80XN0 | |||
|association_with_transcript=0bp_to_ENSMUST00000115227,ENSMUST00000128286,NM_001122683,uc007yxj.2,uc007yxk.2_5end | |||
|cluster_id=chr16:31428831..31428841,+ | |||
|description=CAGE_peak_5_at_Bdh1_5end | |||
|id=chr16:31428831..31428841,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.02e-11!23;CL:0000337!4.02e-11!23;CL:0000221!1.82e-10!44;CL:0000133!1.82e-10!44;CL:0002319!2.08e-10!43;CL:0000540!1.05e-07!33;CL:0000047!1.05e-07!33;CL:0000031!1.05e-07!33;CL:0000404!1.05e-07!33;CL:0002321!3.11e-07!70;CL:0000220!3.11e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.05e-19,23;CL:0000337,7.05e-19,23;CL:0002319,1.40e-15,43;CL:0000221,4.97e-15,44;CL:0000133,4.97e-15,44;CL:0002321,8.96e-15,70;CL:0000540,2.46e-12,33;CL:0000047,2.46e-12,33;CL:0000031,2.46e-12,33;CL:0000404,2.46e-12,33;CL:0002563,3.53e-10,9;CL:0002251,3.53e-10,9;CL:0000393,1.84e-09,39;CL:0000211,1.84e-09,39;CL:0000239,3.41e-07,6;CL:0000677,3.41e-07,6;CL:0000584,3.41e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.57e-18!75;UBERON:0001016!2.57e-18!75;UBERON:0001017!5.35e-18!73;UBERON:0005743!5.35e-18!73;UBERON:0002020!2.70e-17!34;UBERON:0001049!1.90e-15!52;UBERON:0005068!1.90e-15!52;UBERON:0006241!1.90e-15!52;UBERON:0007135!1.90e-15!52;UBERON:0002791!5.83e-14!29;UBERON:0003528!5.83e-14!29;UBERON:0001893!5.83e-14!29;UBERON:0000955!9.85e-14!50;UBERON:0006238!9.85e-14!50;UBERON:0002616!2.33e-13!49;UBERON:0004121!2.64e-13!102;UBERON:0000924!2.64e-13!102;UBERON:0006601!2.64e-13!102;UBERON:0000956!6.24e-12!21;UBERON:0001869!6.24e-12!21;UBERON:0000203!6.24e-12!21;UBERON:0000064!6.68e-12!99;UBERON:0000033!7.34e-11!63;UBERON:0003080!1.26e-10!40;UBERON:0002780!2.53e-10!39;UBERON:0001890!2.53e-10!39;UBERON:0006240!2.53e-10!39;UBERON:0002346!2.77e-10!71;UBERON:0003075!2.77e-10!71;UBERON:0007284!2.77e-10!71;UBERON:0002619!9.29e-10!17;UBERON:0003056!7.80e-09!49;UBERON:0000344!1.40e-07!15;UBERON:0007811!2.57e-07!86;UBERON:0002021!5.80e-07!10;UBERON:0000411!5.80e-07!10;UBERON:0001950!5.80e-07!10;UBERON:0001242!8.74e-07!13;UBERON:0000060!8.74e-07!13;UBERON:0001262!8.74e-07!13;UBERON:0004786!8.74e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.04e-27,73;UBERON:0001016,1.41e-26,75;UBERON:0002020,2.43e-26,34;UBERON:0000073,4.36e-26,54;UBERON:0001049,4.83e-23,52;UBERON:0005068,4.83e-23,52;UBERON:0006241,4.83e-23,52;UBERON:0007135,4.83e-23,52;UBERON:0003528,2.70e-20,29;UBERON:0002791,2.70e-20,29;UBERON:0001893,2.70e-20,29;UBERON:0000955,6.11e-19,47;UBERON:0006238,6.11e-19,47;UBERON:0002616,2.81e-18,46;UBERON:0004121,6.20e-18,95;UBERON:0000924,6.20e-18,95;UBERON:0006601,6.20e-18,95;UBERON:0002346,1.39e-16,64;UBERON:0003075,1.39e-16,64;UBERON:0007284,1.39e-16,64;UBERON:0011216,1.11e-15,194;UBERON:0000956,2.08e-15,21;UBERON:0001869,2.08e-15,21;UBERON:0000203,2.08e-15,21;UBERON:0003080,6.74e-15,40;UBERON:0002780,2.36e-14,39;UBERON:0001890,2.36e-14,39;UBERON:0006240,2.36e-14,39;UBERON:0010371,3.45e-13,73;UBERON:0002619,7.78e-13,17;UBERON:0000344,6.46e-11,15;UBERON:0003056,1.03e-10,49;UBERON:0000160,3.05e-10,31;UBERON:0003350,3.53e-10,9;UBERON:0004808,3.53e-10,9;UBERON:0001277,3.53e-10,9;UBERON:0002021,4.17e-10,10;UBERON:0000411,4.17e-10,10;UBERON:0001950,4.17e-10,10;UBERON:0001242,1.95e-09,13;UBERON:0001262,1.95e-09,13;UBERON:0004786,1.95e-09,13;UBERON:0003076,3.56e-09,12;UBERON:0003057,3.56e-09,12;UBERON:0010314,2.43e-08,92;UBERON:0000485,6.36e-08,11;UBERON:0001948,1.61e-07,5;UBERON:0002315,1.61e-07,5;UBERON:0005409,3.40e-07,47 | |||
|phase1_expression=0,2.44282785347553,2.72999543633722,1.51232105653415,1.50268718983904,2.35030980676646,2.33612640595526,0.129123323441576,0.281577444303333,0.468129052643987,0.171217968225505,0.239316476986009,0.342401459862411,0.174840804837995,0,0.607425802169478,0,0,0.274228867211478,0,0.850432901510698,0.297872853602656,0.783599367416806,1.11994695955385,2.06468352960453,2.29692785646008,1.7230479846363,1.72376986148711,0.380046838912748,0.756090389279792,1.99557459589774,0,0,0,2.3108129580102,1.66234645358492,3.26670970019791,0,0,0,0,0,0,0,0,0,0,2.61630187656536,2.19686182734472,0.58328969722285,2.79972843250725,4.31257693094915,0,0.725362142011344,0,0,0,0,2.02316460859598,1.05798195854407,1.26766280701236,0.677689064138264,0.889294796111139,0,0,0,1.79760066311043,3.07374644257244,3.21437798156281,3.51015439662396,3.78584930432488,5.42736870367227,3.3130281142742,1.95985278743926,0.958454710182364,2.75765635983006,1.10115880999389,1.91531007127782,1.53606533256243,1.18697658957174,1.09785172322892,5.2091337055676,1.3959149950069,0,1.98637722109853,3.24091444021034,2.13557521198654,3.16879057903011,0.605809546665472,0.755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0.563373679106722,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.68510327831436,0,0,0,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,1.8850203613211,1.78819938646014,0,0,0,1.04853447583376,2.28750301409313,1.38219787324151,0.869121600961382,1.27857728665165,1.66230435647648,0.811206315338788,0.101839363850316,0.248813941220186,0.252722758433675,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0.640568601424249,0.281105173679186,0.776110112217047,0,0,0,0.219195732427575,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0.536825675041487,1.68231958851302,4.42489833230923,1.32167513193519,0.793351699990633,0.213288250535234,0,0.257734922644187,1.00841762311671,1.77902435075896,1.90225626112559,0.949058123089023,2.14108641141214,2.26201687920243,2.78539060857611,0.779856348476481,1.79763881730844,1.08069024937347,0.995706366271836,0,0.228497025219458,0,0.407302655690628,0.581857461502877,0.631222379012867,0.316182685621286,1.32849133181642,1.09899109488962,0.987177311374404,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0.983528546038072,0.827810238914197,1.12385412991454,2.22702204525186,0,0.504941854408746,0.94652465824877,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0,1.16902343164525,0.395287777946524,1.28528526568723,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0.922305443831782,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0.258717367565509,0,0,0.535106452806212,0.493647061806363,0,0,0.63549621259146,0.220528398054962,0.49465875882444,0,0.542816324353403,0.716234064018819,0.656563598980245,0.291480836629851,0.927126510052548,0.341741761595705,0.412773735926445,0.185194527369712,0.188368457004691,0,0.228778173206523,0.169978429993855,0,0,0,0,0,0.648032044930808,0.836353184057875,0.87345025498471,1.34864346384821,0.661227645802687,1.83229159388821,1.8146096260851,0,0.56369293868419,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0.314578033277133,0.724752362478018,0,0,0.405450430580328,0.410843828659309,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0.147689527174577,0.201932899896295,0.0762068066549998,0.201652370273681,0.292373642219257,0.192423683280659,0.233753804363138,0.680191150845634,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,6.7770221114048,4.60325236507177,4.58316410751517,3.09335728218638,1.37016503954128,3.0215755895588,2.70009000092722,2.2516060161211,0.906284817968409,2.07104124700728,0.31136204275253,0,0.341467211508268,0.486213434136588,0.838452650511929,0.919217542250071,0.666740183404846,0.206035057238894,0,0.252697211763798,1.01391719956096,0.754505365544305,0.37456602987953,0.448176066834085,0.689225627467359,0.952587382566147,0.115884325944855,0.578727661391115,0.412085900803307,0,0,0.177475806159338,0.715308569841963,0.436039249896986,0.470546902076653,0.338458431566706,0.73171189149109,0,0.407412341537585,0,0.355905054372522,0.788035859004508,0,0.77468420592983,0.771626443924566,0.999242311751784,0.701794825336225,0.214871054048298,0,0.882365676478062,0.231867835620421 | |||
|short_description=p5@Bdh1 | |||
}} |
Revision as of 07:12, 6 August 2015
Short description: | p5@Bdh1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Bdh1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000115227, ENSMUST00000128286, NM_001122683, uc007yxj.2, uc007yxk.2_5end |
EntrezGene: | 71911 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.05e-19 | 23 |
neuroblast (sensu Vertebrata) | 7.05e-19 | 23 |
neural cell | 1.40e-15 | 43 |
ectodermal cell | 4.97e-15 | 44 |
neurectodermal cell | 4.97e-15 | 44 |
embryonic cell | 8.96e-15 | 70 |
neuron | 2.46e-12 | 33 |
neuronal stem cell | 2.46e-12 | 33 |
neuroblast | 2.46e-12 | 33 |
electrically signaling cell | 2.46e-12 | 33 |
intestinal epithelial cell | 3.53e-10 | 9 |
epithelial cell of alimentary canal | 3.53e-10 | 9 |
electrically responsive cell | 1.84e-09 | 39 |
electrically active cell | 1.84e-09 | 39 |
brush border epithelial cell | 3.41e-07 | 6 |
gut absorptive cell | 3.41e-07 | 6 |
enterocyte | 3.41e-07 | 6 |