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FFCP PHASE1:Mm9::chr19:10708790..10708802,+: Difference between revisions

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{{FFCP|EntrezGene=71768|HGNC=|UniProt=Q3U515|association_with_transcript=67bp_to_ENSMUST00000055115,NM_027913,uc008gqn.2,uc008gqo.2_5end|description=CAGE_peak_3_at_Vwce_5end|id=chr19:10708790..10708802,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,6.10e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.27e-16!22;UBERON:0007499!1.27e-16!22;UBERON:0006925!1.27e-16!22;UBERON:0009497!1.27e-16!22;UBERON:0000015!1.27e-16!22;UBERON:0002423!1.27e-16!22;UBERON:0006235!1.27e-16!22;UBERON:0008835!1.27e-16!22;UBERON:0003894!1.27e-16!22;UBERON:0004161!1.27e-16!22;UBERON:0008836!1.27e-16!22;UBERON:0009854!1.96e-15!23;UBERON:0009856!1.96e-15!23;UBERON:0002365!2.31e-13!25;UBERON:0002330!2.31e-13!25;UBERON:0003929!6.87e-13!55;UBERON:0005172!1.77e-11!49;UBERON:0005173!1.77e-11!49;UBERON:0002417!1.77e-11!49;UBERON:0000916!1.77e-11!49;UBERON:0005911!4.19e-09!69;UBERON:0000490!2.88e-08!66;UBERON:0001007!8.04e-08!128;UBERON:0001555!8.04e-08!128;UBERON:0007026!8.04e-08!128;UBERON:0002368!8.88e-08!60;UBERON:0004119!2.18e-07!130;UBERON:0000925!2.18e-07!130;UBERON:0006595!2.18e-07!130;UBERON:0004921!3.30e-07!126;UBERON:0004185!3.30e-07!126;UBERON:0005057!4.22e-07!51;UBERON:0009569!7.02e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.94e-35,22;UBERON:0007499,6.94e-35,22;UBERON:0006925,6.94e-35,22;UBERON:0009497,6.94e-35,22;UBERON:0000015,6.94e-35,22;UBERON:0002423,6.94e-35,22;UBERON:0006235,6.94e-35,22;UBERON:0008835,6.94e-35,22;UBERON:0003894,6.94e-35,22;UBERON:0004161,6.94e-35,22;UBERON:0008836,6.94e-35,22;UBERON:0009854,4.03e-33,23;UBERON:0009856,4.03e-33,23;UBERON:0002365,5.13e-30,25;UBERON:0002330,5.13e-30,25;UBERON:0005172,1.11e-18,49;UBERON:0005173,1.11e-18,49;UBERON:0002417,1.11e-18,49;UBERON:0000916,1.11e-18,49;UBERON:0003929,1.04e-17,55;UBERON:0005256,3.29e-14,45;UBERON:0003104,9.52e-14,61;UBERON:0009142,9.52e-14,61;UBERON:0000490,1.19e-13,66;UBERON:0003914,2.25e-13,47;UBERON:0005911,9.00e-13,69;UBERON:0009569,3.13e-12,66;UBERON:0002368,1.59e-11,60;UBERON:0002530,3.36e-10,65;UBERON:0004921,8.27e-10,114;UBERON:0001007,1.65e-09,116;UBERON:0001555,1.65e-09,116;UBERON:0007026,1.65e-09,116;UBERON:0004119,3.23e-09,118;UBERON:0000925,3.23e-09,118;UBERON:0006595,3.23e-09,118;UBERON:0005177,3.30e-09,79;UBERON:0000949,1.15e-08,72;UBERON:0002100,2.33e-07,90;UBERON:0001041,2.95e-07,80|phase1_expression=0,0.348975407639361,0.909998478779072,3.32710632437513,4.50806156951712,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.255129870453209,0,0,0.639969691173627,0.91763712426868,1.14846392823004,0,1.07735616342945,0,0.504060259519861,0,0,0,0,0.866554859253824,0.498703936075477,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0.427115042397309,0,0,0,0,1.72084775396277,2.03991400112325,1.07940638327563,8.4470934268197,6.2723764193627,1.68533304158102,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0.346970653532272,0.304465478312141,0.922461989024234,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0.251308704225729,0,0,0,0,0.101839363850316,0,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0.215567992932842,0.378212160335639,0.175951124163949,0.657587197282725,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.264450566663544,0.213288250535234,0,0.515469845288373,1.81515172161008,0.444756087689741,0.951128130562796,2.37264530772256,1.15289268306808,1.00534083520108,1.79060824837036,0.779856348476481,0,0.432276099749388,1.39398891278057,0.379335801906163,0.456994050438915,0,1.01825663922657,0.775809948670503,0.210407459670956,1.26473074248515,1.18088118383682,0.941992367048249,1.23397163921801,2.66807364378434,1.83529616287703,0.982794975566015,1.57403478669398,2.23146133527353,3.61765739628625,5.60176873919124,8.34318798607351,3.89124544260085,3.84385978463314,7.18841032636773,5.58211421502755,3.74445207737473,3.03094653536534,1.97337154874103,4.3419916922703,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0,0,0,0.728341908464944,0,0,0,0.614870295887855,0.516856586336442,0,0,0,0,0,0,0.18006109403131,0,0.428674070063185,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0.330613822901344,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.337912250981556,0,0.13020438484395,0,0,0,0,0,0.410843828659309,1.16928740680016,1.07416017400489,0.596044064343795,0.360586348559907,0.147689527174577,0.302899349844443,0.533447646584999,0.302478555410522,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0.729320151204882,0,0.183843508450014,0.222246727801615,1.03017528619447,1.28367683836726,0,1.2673964994512,0.943131706930381,0.468207537349412,0.640251524048693,0.689225627467359,0,0.579421629724277,0.77163688185482,0,0.588795680537589,1.37147700954166,0.887379030796687,0.476872379894642,1.0174249164263,0.376437521661322,0.25384382367503,1.09756783723664,0.789209134313529,0.814824683075171,0.561142271657738,1.18635018124174,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0,0.701794825336225,1.07435527024149,0,0,0|short_description=p3@Vwce}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:71768
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q3U515
|association_with_transcript=67bp_to_ENSMUST00000055115,NM_027913,uc008gqn.2,uc008gqo.2_5end
|cluster_id=chr19:10708790..10708802,+
|description=CAGE_peak_3_at_Vwce_5end
|id=chr19:10708790..10708802,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,6.10e-07,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!1.27e-16!22;UBERON:0007499!1.27e-16!22;UBERON:0006925!1.27e-16!22;UBERON:0009497!1.27e-16!22;UBERON:0000015!1.27e-16!22;UBERON:0002423!1.27e-16!22;UBERON:0006235!1.27e-16!22;UBERON:0008835!1.27e-16!22;UBERON:0003894!1.27e-16!22;UBERON:0004161!1.27e-16!22;UBERON:0008836!1.27e-16!22;UBERON:0009854!1.96e-15!23;UBERON:0009856!1.96e-15!23;UBERON:0002365!2.31e-13!25;UBERON:0002330!2.31e-13!25;UBERON:0003929!6.87e-13!55;UBERON:0005172!1.77e-11!49;UBERON:0005173!1.77e-11!49;UBERON:0002417!1.77e-11!49;UBERON:0000916!1.77e-11!49;UBERON:0005911!4.19e-09!69;UBERON:0000490!2.88e-08!66;UBERON:0001007!8.04e-08!128;UBERON:0001555!8.04e-08!128;UBERON:0007026!8.04e-08!128;UBERON:0002368!8.88e-08!60;UBERON:0004119!2.18e-07!130;UBERON:0000925!2.18e-07!130;UBERON:0006595!2.18e-07!130;UBERON:0004921!3.30e-07!126;UBERON:0004185!3.30e-07!126;UBERON:0005057!4.22e-07!51;UBERON:0009569!7.02e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.94e-35,22;UBERON:0007499,6.94e-35,22;UBERON:0006925,6.94e-35,22;UBERON:0009497,6.94e-35,22;UBERON:0000015,6.94e-35,22;UBERON:0002423,6.94e-35,22;UBERON:0006235,6.94e-35,22;UBERON:0008835,6.94e-35,22;UBERON:0003894,6.94e-35,22;UBERON:0004161,6.94e-35,22;UBERON:0008836,6.94e-35,22;UBERON:0009854,4.03e-33,23;UBERON:0009856,4.03e-33,23;UBERON:0002365,5.13e-30,25;UBERON:0002330,5.13e-30,25;UBERON:0005172,1.11e-18,49;UBERON:0005173,1.11e-18,49;UBERON:0002417,1.11e-18,49;UBERON:0000916,1.11e-18,49;UBERON:0003929,1.04e-17,55;UBERON:0005256,3.29e-14,45;UBERON:0003104,9.52e-14,61;UBERON:0009142,9.52e-14,61;UBERON:0000490,1.19e-13,66;UBERON:0003914,2.25e-13,47;UBERON:0005911,9.00e-13,69;UBERON:0009569,3.13e-12,66;UBERON:0002368,1.59e-11,60;UBERON:0002530,3.36e-10,65;UBERON:0004921,8.27e-10,114;UBERON:0001007,1.65e-09,116;UBERON:0001555,1.65e-09,116;UBERON:0007026,1.65e-09,116;UBERON:0004119,3.23e-09,118;UBERON:0000925,3.23e-09,118;UBERON:0006595,3.23e-09,118;UBERON:0005177,3.30e-09,79;UBERON:0000949,1.15e-08,72;UBERON:0002100,2.33e-07,90;UBERON:0001041,2.95e-07,80
|phase1_expression=0,0.348975407639361,0.909998478779072,3.32710632437513,4.50806156951712,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.255129870453209,0,0,0.639969691173627,0.91763712426868,1.14846392823004,0,1.07735616342945,0,0.504060259519861,0,0,0,0,0.866554859253824,0.498703936075477,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0.427115042397309,0,0,0,0,1.72084775396277,2.03991400112325,1.07940638327563,8.4470934268197,6.2723764193627,1.68533304158102,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0.346970653532272,0.304465478312141,0.922461989024234,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0.251308704225729,0,0,0,0,0.101839363850316,0,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0.215567992932842,0.378212160335639,0.175951124163949,0.657587197282725,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.264450566663544,0.213288250535234,0,0.515469845288373,1.81515172161008,0.444756087689741,0.951128130562796,2.37264530772256,1.15289268306808,1.00534083520108,1.79060824837036,0.779856348476481,0,0.432276099749388,1.39398891278057,0.379335801906163,0.456994050438915,0,1.01825663922657,0.775809948670503,0.210407459670956,1.26473074248515,1.18088118383682,0.941992367048249,1.23397163921801,2.66807364378434,1.83529616287703,0.982794975566015,1.57403478669398,2.23146133527353,3.61765739628625,5.60176873919124,8.34318798607351,3.89124544260085,3.84385978463314,7.18841032636773,5.58211421502755,3.74445207737473,3.03094653536534,1.97337154874103,4.3419916922703,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0,0,0,0.728341908464944,0,0,0,0.614870295887855,0.516856586336442,0,0,0,0,0,0,0.18006109403131,0,0.428674070063185,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0.330613822901344,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.337912250981556,0,0.13020438484395,0,0,0,0,0,0.410843828659309,1.16928740680016,1.07416017400489,0.596044064343795,0.360586348559907,0.147689527174577,0.302899349844443,0.533447646584999,0.302478555410522,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0.729320151204882,0,0.183843508450014,0.222246727801615,1.03017528619447,1.28367683836726,0,1.2673964994512,0.943131706930381,0.468207537349412,0.640251524048693,0.689225627467359,0,0.579421629724277,0.77163688185482,0,0.588795680537589,1.37147700954166,0.887379030796687,0.476872379894642,1.0174249164263,0.376437521661322,0.25384382367503,1.09756783723664,0.789209134313529,0.814824683075171,0.561142271657738,1.18635018124174,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0,0.701794825336225,1.07435527024149,0,0,0
|short_description=p3@Vwce
}}

Revision as of 06:33, 6 August 2015

Short description:p3@Vwce
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Vwce_5end
Coexpression cluster:NA
Association with transcript: 67bp_to_ENSMUST00000055115, NM_027913, uc008gqn.2, uc008gqo.2_5end
EntrezGene:71768
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p3@Vwce

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F48.45
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G48.34
liver, neonate N00.CNhs11117.641-24F43.89
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte6.10e-075

Uber anatomy
Ontology termp-valuen
liver6.94e-3522
epithelial sac6.94e-3522
digestive gland6.94e-3522
epithelium of foregut-midgut junction6.94e-3522
anatomical boundary6.94e-3522
hepatobiliary system6.94e-3522
foregut-midgut junction6.94e-3522
hepatic diverticulum6.94e-3522
liver primordium6.94e-3522
septum transversum6.94e-3522
liver bud6.94e-3522
digestive tract diverticulum4.03e-3323
sac4.03e-3323
exocrine gland5.13e-3025
exocrine system5.13e-3025
abdomen element1.11e-1849
abdominal segment element1.11e-1849
abdominal segment of trunk1.11e-1849
abdomen1.11e-1849
gut epithelium1.04e-1755
trunk mesenchyme3.29e-1445
mesenchyme9.52e-1461
entire embryonic mesenchyme9.52e-1461
unilaminar epithelium1.19e-1366
epithelial tube2.25e-1347
endo-epithelium9.00e-1369
subdivision of trunk3.13e-1266
endocrine gland1.59e-1160
gland3.36e-1065
subdivision of digestive tract8.27e-10114
digestive system1.65e-09116
digestive tract1.65e-09116
primitive gut1.65e-09116
endoderm-derived structure3.23e-09118
endoderm3.23e-09118
presumptive endoderm3.23e-09118
trunk region element3.30e-0979
endocrine system1.15e-0872
trunk2.33e-0790
foregut2.95e-0780
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