FFCP PHASE1:Mm9::chr18:84255362..84255383,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=249|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:84255362..84255383,-|id=chr18:84255362..84255383,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002612,3.34e-12,3;CL:0002611,2.09e-08,2;CL:0000540,1.47e-07,33;CL:0000047,1.47e-07,33;CL:0000031,1.47e-07,33;CL:0000404,1.47e-07,33;CL:0000117,4.58e-07,23;CL:0000337,4.58e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001948,5.87e-19,5;UBERON:0002315,5.87e-19,5;UBERON:0002240,9.36e-16,6;UBERON:0005174,9.36e-16,6;UBERON:0001137,9.36e-16,6;UBERON:0002257,3.34e-12,3;UBERON:0002256,2.09e-08,2;UBERON:0003076,1.02e-07,12;UBERON:0003057,1.02e-07,12|phase1_expression=0.80074423552397,0,0,0,0.500895729946347,0.503637815735669,0,0.129123323441576,0.84473233291,1.40438715793196,0,0.0797721589953364,0.171200729931206,0.34968160967599,0,0,0,0.157731082679119,0.411343300817216,0,0.0850432901510698,0.297872853602656,0,0,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,0,0,0,0.388859798148567,0,0,0.167782606057736,0,2.01656279485478,0.257259436035947,0.286533439938757,0,1.41621522601718,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.210324961351382,1.99955689082663,2.42955395046775,0.734944795289724,0.575072826109418,0,0,0,0.153606533256243,0.527545150920775,0.823388792421687,0.52091337055676,0.279182999001381,0,0.15279824777681,2.94628585473668,4.6982654663704,11.183966749518,0.227178579999552,0.226714680320357,0.289864488701678,0,0,0,0.649776417447669,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0.432982082022428,1.01343946190039,1.01104889002957,0.11418387971906,0,0,0.346970653532272,0.304465478312141,0,0.301445281105245,0.470354828542819,0.376999773989026,0.247194967734374,0,0,0.323533699894818,0,0,0,0,0,0,0.11981512450592,1.19980546198682,0.127070227073065,0.149790639404823,0,1.00523481690292,0,0,0.20778804455956,0.162241263067758,0.407357455401265,0.124406970610093,0.252722758433675,0,0.130120442962704,0.229902104433473,0,0,0.476255494059295,0.384341160854549,0.187403449119458,0,1.72454394346274,2.26927296201383,0.351902248327898,0.876782929710299,0,0.348252166522167,0.61734640922383,1.19420560091096,0,0.51469581422943,0.284163499395593,0.621377317606506,0.234526059981096,0,0.23674473558521,0.196764231747404,0.308534225774757,0.465067889500816,0.268273401399619,0.583826711835847,0.16455984991348,0.164167464079095,0,0.292399974850665,0.219550115291051,0.805238512562231,0,0.205809224758569,0,0,0.853153002140936,0.464473343720877,0.515469845288373,0.80673409849337,0.22237804384487,0,0.949058123089023,0,0.251335208800269,0,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.342745537829186,1.1270773567308,0.610953983535943,0.193952487167626,0.210407459670956,0.189709611372772,0.295220295959204,0.156998727841375,0,0,0,0.589676985339609,0,0,0,0.50925170356284,0,0,0,1.43768206527355,0.744281895337007,0.312037673114561,0,0,0,0.369506380333209,0.757965647081939,0.814824882210129,0.509235257325564,0,0.335012514883631,0.238043640886014,0.780534591431195,0.315270288212382,0.44292937929755,0.318909537314974,0,0,0.433947175744535,0,0,0,0.275936746304732,0.481651769963376,0.586058432961016,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0.238968797952552,0,0.283076530788832,1.21443210502468,0.584511715822624,1.97643888973262,6.42642632843614,0.425820255624806,0.178065603667255,0.977321756121456,0.494910368917606,0,0,0.302323556964751,0.565815239267694,0.885905678642318,0,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0.164549020602121,0,0,0.21183207086382,0.441056796109924,0.16488625294148,0.322928853391811,0.301564624640779,0.119372344003136,0,0,0.556275906031529,0.512612642393558,0.206386867963223,0.185194527369712,0.376736914009382,0.136694227721025,0,0.509935289981566,0.839708713941948,0.552799895217695,0,1.10717597753397,0.609958401380546,0.432021363287205,0.627264888043406,0.218362563746178,0.134864346384821,0.0826534557253359,1.04702376793612,0.388844919875379,0.621339313086926,0,0.299033092087958,0.330916980914195,0.194451188344048,0.516639293910924,0,0.821500670520278,0.39061315453185,0.629156066554265,0,0.576060012515731,0,0.405450430580328,0.102710957164827,0.51968329191118,0.537080087002444,0.39736270956253,0.240390899039938,0.590758108698309,0.100966449948148,0.381034033274999,0.806609481094724,0.487289403698762,0.384847366561318,0.701261413089414,0,0.221985953374065,0.179427713218951,0.167884616364078,0,0,0,0,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0,0.51776031175182,1.3492355185943,1.59609949360412,0.341467211508268,0.486213434136588,0.628839487883947,0.735374033800057,0.44449345560323,1.03017528619447,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=249 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:84255362..84255383,- | |||
|description=CAGE_peak_at_chr18:84255362..84255383,- | |||
|id=chr18:84255362..84255383,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,3.34e-12,3;CL:0002611,2.09e-08,2;CL:0000540,1.47e-07,33;CL:0000047,1.47e-07,33;CL:0000031,1.47e-07,33;CL:0000404,1.47e-07,33;CL:0000117,4.58e-07,23;CL:0000337,4.58e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,5.87e-19,5;UBERON:0002315,5.87e-19,5;UBERON:0002240,9.36e-16,6;UBERON:0005174,9.36e-16,6;UBERON:0001137,9.36e-16,6;UBERON:0002257,3.34e-12,3;UBERON:0002256,2.09e-08,2;UBERON:0003076,1.02e-07,12;UBERON:0003057,1.02e-07,12 | |||
|phase1_expression=0.80074423552397,0,0,0,0.500895729946347,0.503637815735669,0,0.129123323441576,0.84473233291,1.40438715793196,0,0.0797721589953364,0.171200729931206,0.34968160967599,0,0,0,0.157731082679119,0.411343300817216,0,0.0850432901510698,0.297872853602656,0,0,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,0,0,0,0.388859798148567,0,0,0.167782606057736,0,2.01656279485478,0.257259436035947,0.286533439938757,0,1.41621522601718,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.210324961351382,1.99955689082663,2.42955395046775,0.734944795289724,0.575072826109418,0,0,0,0.153606533256243,0.527545150920775,0.823388792421687,0.52091337055676,0.279182999001381,0,0.15279824777681,2.94628585473668,4.6982654663704,11.183966749518,0.227178579999552,0.226714680320357,0.289864488701678,0,0,0,0.649776417447669,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0.432982082022428,1.01343946190039,1.01104889002957,0.11418387971906,0,0,0.346970653532272,0.304465478312141,0,0.301445281105245,0.470354828542819,0.376999773989026,0.247194967734374,0,0,0.323533699894818,0,0,0,0,0,0,0.11981512450592,1.19980546198682,0.127070227073065,0.149790639404823,0,1.00523481690292,0,0,0.20778804455956,0.162241263067758,0.407357455401265,0.124406970610093,0.252722758433675,0,0.130120442962704,0.229902104433473,0,0,0.476255494059295,0.384341160854549,0.187403449119458,0,1.72454394346274,2.26927296201383,0.351902248327898,0.876782929710299,0,0.348252166522167,0.61734640922383,1.19420560091096,0,0.51469581422943,0.284163499395593,0.621377317606506,0.234526059981096,0,0.23674473558521,0.196764231747404,0.308534225774757,0.465067889500816,0.268273401399619,0.583826711835847,0.16455984991348,0.164167464079095,0,0.292399974850665,0.219550115291051,0.805238512562231,0,0.205809224758569,0,0,0.853153002140936,0.464473343720877,0.515469845288373,0.80673409849337,0.22237804384487,0,0.949058123089023,0,0.251335208800269,0,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.342745537829186,1.1270773567308,0.610953983535943,0.193952487167626,0.210407459670956,0.189709611372772,0.295220295959204,0.156998727841375,0,0,0,0.589676985339609,0,0,0,0.50925170356284,0,0,0,1.43768206527355,0.744281895337007,0.312037673114561,0,0,0,0.369506380333209,0.757965647081939,0.814824882210129,0.509235257325564,0,0.335012514883631,0.238043640886014,0.780534591431195,0.315270288212382,0.44292937929755,0.318909537314974,0,0,0.433947175744535,0,0,0,0.275936746304732,0.481651769963376,0.586058432961016,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0.238968797952552,0,0.283076530788832,1.21443210502468,0.584511715822624,1.97643888973262,6.42642632843614,0.425820255624806,0.178065603667255,0.977321756121456,0.494910368917606,0,0,0.302323556964751,0.565815239267694,0.885905678642318,0,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0.164549020602121,0,0,0.21183207086382,0.441056796109924,0.16488625294148,0.322928853391811,0.301564624640779,0.119372344003136,0,0,0.556275906031529,0.512612642393558,0.206386867963223,0.185194527369712,0.376736914009382,0.136694227721025,0,0.509935289981566,0.839708713941948,0.552799895217695,0,1.10717597753397,0.609958401380546,0.432021363287205,0.627264888043406,0.218362563746178,0.134864346384821,0.0826534557253359,1.04702376793612,0.388844919875379,0.621339313086926,0,0.299033092087958,0.330916980914195,0.194451188344048,0.516639293910924,0,0.821500670520278,0.39061315453185,0.629156066554265,0,0.576060012515731,0,0.405450430580328,0.102710957164827,0.51968329191118,0.537080087002444,0.39736270956253,0.240390899039938,0.590758108698309,0.100966449948148,0.381034033274999,0.806609481094724,0.487289403698762,0.384847366561318,0.701261413089414,0,0.221985953374065,0.179427713218951,0.167884616364078,0,0,0,0,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0,0.51776031175182,1.3492355185943,1.59609949360412,0.341467211508268,0.486213434136588,0.628839487883947,0.735374033800057,0.44449345560323,1.03017528619447,0,0.505394423527595,0.50695859978048,0.565879024158229,0.187283014939765,0.576226371643824,0.402048282689293,0.476293691283074,0.231768651889711,0.38581844092741,0,0.441596760403192,0.342869252385415,0.177475806159338,0,0.726732083161643,0.470546902076653,0.592302255241736,0.548783918618318,0,0.407412341537585,0,0.830445126869219,0.29551344712669,0,0.77468420592983,0.578719832943424,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr18:84255362..84255383,- | |||
}} |
Latest revision as of 05:05, 6 August 2015
Short description: | p@chr18:84255362..84255383, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:84255362..84255383, - |
Coexpression cluster: | MCL_coexpression_mm9:249 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 3.34e-12 | 3 |
neuron of the dorsal spinal cord | 2.09e-08 | 2 |
neuron | 1.47e-07 | 33 |
neuronal stem cell | 1.47e-07 | 33 |
neuroblast | 1.47e-07 | 33 |
electrically signaling cell | 1.47e-07 | 33 |
CNS neuron (sensu Vertebrata) | 4.58e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.58e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 5.87e-19 | 5 |
gray matter of spinal cord | 5.87e-19 | 5 |
spinal cord | 9.36e-16 | 6 |
dorsal region element | 9.36e-16 | 6 |
dorsum | 9.36e-16 | 6 |
ventral horn of spinal cord | 3.34e-12 | 3 |
dorsal horn of spinal cord | 2.09e-08 | 2 |
posterior neural tube | 1.02e-07 | 12 |
chordal neural plate | 1.02e-07 | 12 |