FFCP PHASE1:Mm9::chr11:58424979..58425002,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:58424979..58425002,-|id=chr11:58424979..58425002,-|ontology_enrichment_celltype=CL:0002563!1.08e-15!9;CL:0002251!1.08e-15!9;CL:0000239!1.68e-11!6;CL:0000677!1.68e-11!6;CL:0000212!1.68e-11!6;CL:0000584!1.68e-11!6;CL:0000075!1.05e-09!7;CL:0002076!1.50e-08!15;CL:0000066!4.51e-08!25|ontology_enrichment_celltype_v019_2=CL:0000239,2.63e-19,6;CL:0000677,2.63e-19,6;CL:0000584,2.63e-19,6;CL:0002563,7.72e-18,9;CL:0002251,7.72e-18,9;CL:0000075,1.56e-16,7;CL:0000682,4.06e-13,3;CL:0000066,4.12e-13,25;CL:0002076,1.61e-10,15;CL:0000223,9.16e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.75e-21!15;UBERON:0000160!8.00e-20!43;UBERON:0001242!3.76e-18!13;UBERON:0000060!3.76e-18!13;UBERON:0001262!3.76e-18!13;UBERON:0004786!3.76e-18!13;UBERON:0005409!1.06e-17!59;UBERON:0003350!1.08e-15!9;UBERON:0004808!1.08e-15!9;UBERON:0001277!1.08e-15!9;UBERON:0004923!9.73e-14!24;UBERON:0000485!1.94e-12!11;UBERON:0004119!7.93e-07!130;UBERON:0000925!7.93e-07!130;UBERON:0006595!7.93e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.69e-26,31;UBERON:0000344,1.75e-23,15;UBERON:0003350,7.72e-18,9;UBERON:0004808,7.72e-18,9;UBERON:0001277,7.72e-18,9;UBERON:0005409,1.02e-16,47;UBERON:0001242,1.29e-16,13;UBERON:0001262,1.29e-16,13;UBERON:0004786,1.29e-16,13;UBERON:0000485,1.62e-14,11;UBERON:0004923,3.30e-14,24;UBERON:0001962,5.16e-10,2;UBERON:0001961,5.16e-10,2;UBERON:0001744,5.16e-10,2;UBERON:0001007,1.83e-07,116;UBERON:0001555,1.83e-07,116;UBERON:0007026,1.83e-07,116;UBERON:0004119,2.72e-07,118;UBERON:0000925,2.72e-07,118;UBERON:0006595,2.72e-07,118;UBERON:0002465,5.99e-07,3|phase1_expression=0,4.88565570695105,7.73498706962211,52.0238443447748,44.5797199652249,0.839396359559449,1.63528848416868,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,4.7997726838022,3.89995777814189,2.8711598205751,1.29228598847722,1.72376986148711,0.190023419456374,0.756090389279792,0,0,0,0,0.288851619751275,1.49611180822643,0.816677425049476,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0.35333957451034,0,0,0,0,0,0,0,3.76806803072898,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,11.2342386214491,5.02456076660734,0.213288250535234,0,0,0,0,0.190225626112559,3.32170343081158,0,0.502670417600539,0.198956472041151,0.38992817423824,8.98819408654222,4.53889904736858,4.18196673834171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p@chr11:58424979..58425002,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:58424979..58425002,- | |||
|description=CAGE_peak_at_chr11:58424979..58425002,- | |||
|id=chr11:58424979..58425002,- | |||
|ontology_enrichment_celltype=CL:0002563!1.08e-15!9;CL:0002251!1.08e-15!9;CL:0000239!1.68e-11!6;CL:0000677!1.68e-11!6;CL:0000212!1.68e-11!6;CL:0000584!1.68e-11!6;CL:0000075!1.05e-09!7;CL:0002076!1.50e-08!15;CL:0000066!4.51e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.63e-19,6;CL:0000677,2.63e-19,6;CL:0000584,2.63e-19,6;CL:0002563,7.72e-18,9;CL:0002251,7.72e-18,9;CL:0000075,1.56e-16,7;CL:0000682,4.06e-13,3;CL:0000066,4.12e-13,25;CL:0002076,1.61e-10,15;CL:0000223,9.16e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.75e-21!15;UBERON:0000160!8.00e-20!43;UBERON:0001242!3.76e-18!13;UBERON:0000060!3.76e-18!13;UBERON:0001262!3.76e-18!13;UBERON:0004786!3.76e-18!13;UBERON:0005409!1.06e-17!59;UBERON:0003350!1.08e-15!9;UBERON:0004808!1.08e-15!9;UBERON:0001277!1.08e-15!9;UBERON:0004923!9.73e-14!24;UBERON:0000485!1.94e-12!11;UBERON:0004119!7.93e-07!130;UBERON:0000925!7.93e-07!130;UBERON:0006595!7.93e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.69e-26,31;UBERON:0000344,1.75e-23,15;UBERON:0003350,7.72e-18,9;UBERON:0004808,7.72e-18,9;UBERON:0001277,7.72e-18,9;UBERON:0005409,1.02e-16,47;UBERON:0001242,1.29e-16,13;UBERON:0001262,1.29e-16,13;UBERON:0004786,1.29e-16,13;UBERON:0000485,1.62e-14,11;UBERON:0004923,3.30e-14,24;UBERON:0001962,5.16e-10,2;UBERON:0001961,5.16e-10,2;UBERON:0001744,5.16e-10,2;UBERON:0001007,1.83e-07,116;UBERON:0001555,1.83e-07,116;UBERON:0007026,1.83e-07,116;UBERON:0004119,2.72e-07,118;UBERON:0000925,2.72e-07,118;UBERON:0006595,2.72e-07,118;UBERON:0002465,5.99e-07,3 | |||
|phase1_expression=0,4.88565570695105,7.73498706962211,52.0238443447748,44.5797199652249,0.839396359559449,1.63528848416868,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,4.7997726838022,3.89995777814189,2.8711598205751,1.29228598847722,1.72376986148711,0.190023419456374,0.756090389279792,0,0,0,0,0.288851619751275,1.49611180822643,0.816677425049476,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0.35333957451034,0,0,0,0,0,0,0,3.76806803072898,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,11.2342386214491,5.02456076660734,0.213288250535234,0,0,0,0,0.190225626112559,3.32170343081158,0,0.502670417600539,0.198956472041151,0.38992817423824,8.98819408654222,4.53889904736858,4.18196673834171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr11:58424979..58425002,- | |||
}} |
Latest revision as of 04:15, 6 August 2015
Short description: | p@chr11:58424979..58425002, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:58424979..58425002, - |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.63e-19 | 6 |
gut absorptive cell | 2.63e-19 | 6 |
enterocyte | 2.63e-19 | 6 |
intestinal epithelial cell | 7.72e-18 | 9 |
epithelial cell of alimentary canal | 7.72e-18 | 9 |
columnar/cuboidal epithelial cell | 1.56e-16 | 7 |
M cell of gut | 4.06e-13 | 3 |
epithelial cell | 4.12e-13 | 25 |
endo-epithelial cell | 1.61e-10 | 15 |
endodermal cell | 9.16e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.69e-26 | 31 |
mucosa | 1.75e-23 | 15 |
epithelium of mucosa | 7.72e-18 | 9 |
gastrointestinal system epithelium | 7.72e-18 | 9 |
intestinal epithelium | 7.72e-18 | 9 |
gastrointestinal system | 1.02e-16 | 47 |
intestinal mucosa | 1.29e-16 | 13 |
wall of intestine | 1.29e-16 | 13 |
gastrointestinal system mucosa | 1.29e-16 | 13 |
simple columnar epithelium | 1.62e-14 | 11 |
organ component layer | 3.30e-14 | 24 |
gut-associated lymphoid tissue | 5.16e-10 | 2 |
mucosa-associated lymphoid tissue | 5.16e-10 | 2 |
lymphoid tissue | 5.16e-10 | 2 |
digestive system | 1.83e-07 | 116 |
digestive tract | 1.83e-07 | 116 |
primitive gut | 1.83e-07 | 116 |
endoderm-derived structure | 2.72e-07 | 118 |
endoderm | 2.72e-07 | 118 |
presumptive endoderm | 2.72e-07 | 118 |
lymphoid system | 5.99e-07 | 3 |