FFCP PHASE1:Mm9::chr11:58200225..58200263,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1293|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:58200225..58200263,+|id=chr11:58200225..58200263,+|ontology_enrichment_celltype=CL:0002563!8.64e-13!9;CL:0002251!8.64e-13!9;CL:0000239!9.57e-10!6;CL:0000677!9.57e-10!6;CL:0000212!9.57e-10!6;CL:0000584!9.57e-10!6;CL:0000075!3.36e-08!7;CL:0002076!7.48e-07!15|ontology_enrichment_celltype_v019_2=CL:0000239,5.31e-13,6;CL:0000677,5.31e-13,6;CL:0000584,5.31e-13,6;CL:0002563,4.34e-11,9;CL:0002251,4.34e-11,9;CL:0000075,4.95e-11,7;CL:0000682,3.24e-07,3;CL:0000066,7.54e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.46e-30!59;UBERON:0000160!3.31e-27!43;UBERON:0000344!9.26e-22!15;UBERON:0001242!1.23e-18!13;UBERON:0000060!1.23e-18!13;UBERON:0001262!1.23e-18!13;UBERON:0004786!1.23e-18!13;UBERON:0003350!8.64e-13!9;UBERON:0004808!8.64e-13!9;UBERON:0001277!8.64e-13!9;UBERON:0004923!6.14e-12!24;UBERON:0001007!1.35e-10!128;UBERON:0001555!1.35e-10!128;UBERON:0007026!1.35e-10!128;UBERON:0004119!2.90e-10!130;UBERON:0000925!2.90e-10!130;UBERON:0006595!2.90e-10!130;UBERON:0000485!4.44e-10!11;UBERON:0004921!3.71e-09!126;UBERON:0004185!3.71e-09!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.10e-41,31;UBERON:0005409,1.77e-39,47;UBERON:0000344,4.82e-23,15;UBERON:0001242,7.66e-19,13;UBERON:0001262,7.66e-19,13;UBERON:0004786,7.66e-19,13;UBERON:0001007,6.82e-14,116;UBERON:0001555,6.82e-14,116;UBERON:0007026,6.82e-14,116;UBERON:0004119,1.59e-13,118;UBERON:0000925,1.59e-13,118;UBERON:0006595,1.59e-13,118;UBERON:0004923,3.27e-13,24;UBERON:0004921,7.15e-12,114;UBERON:0003350,4.34e-11,9;UBERON:0004808,4.34e-11,9;UBERON:0001277,4.34e-11,9;UBERON:0002108,1.16e-09,4;UBERON:0000485,7.16e-09,11;UBERON:0000331,3.65e-08,3;UBERON:0002116,3.65e-08,3;UBERON:0001204,3.65e-08,3;UBERON:0001168,3.65e-08,3|phase1_expression=0,6.2815573375085,3.63999391511629,7.25914107136392,4.50806156951712,4.36486106970913,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,9.5995453676044,6.8822784320151,4.01962374880514,4.73838195774982,6.24866574789078,17.6721780094428,6.80481350351813,10.199603490144,0,0,0,0.866554859253824,2.65975432573588,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,4.11061966988616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31958806090611,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,5.30717792710717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,5.81791246659797,0,0,0.902072229254653,1.4117846723634,1.77902435075896,3.42406127002606,4.2707615539006,2.79988223030818,4.02136334080431,2.38747766449381,3.31438948102504,4.49409704327111,5.40345124686736,5.97423819763102,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,17.184071124272,0,0,0.540026704109006,1.04544148007234,0.218362563746178,1.07891477107857,1.23980183588004,1.30877970992015,16.0722566881823,0,12.4012446510522,0,0,0,0,0,0,0,0,5.55643477899814,6.04863013141517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0.685738504770831,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0,0.492522411877817,0,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0,0,0|short_description=p@chr11:58200225..58200263,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1293 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:58200225..58200263,+ | |||
|description=CAGE_peak_at_chr11:58200225..58200263,+ | |||
|id=chr11:58200225..58200263,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.64e-13!9;CL:0002251!8.64e-13!9;CL:0000239!9.57e-10!6;CL:0000677!9.57e-10!6;CL:0000212!9.57e-10!6;CL:0000584!9.57e-10!6;CL:0000075!3.36e-08!7;CL:0002076!7.48e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.31e-13,6;CL:0000677,5.31e-13,6;CL:0000584,5.31e-13,6;CL:0002563,4.34e-11,9;CL:0002251,4.34e-11,9;CL:0000075,4.95e-11,7;CL:0000682,3.24e-07,3;CL:0000066,7.54e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.46e-30!59;UBERON:0000160!3.31e-27!43;UBERON:0000344!9.26e-22!15;UBERON:0001242!1.23e-18!13;UBERON:0000060!1.23e-18!13;UBERON:0001262!1.23e-18!13;UBERON:0004786!1.23e-18!13;UBERON:0003350!8.64e-13!9;UBERON:0004808!8.64e-13!9;UBERON:0001277!8.64e-13!9;UBERON:0004923!6.14e-12!24;UBERON:0001007!1.35e-10!128;UBERON:0001555!1.35e-10!128;UBERON:0007026!1.35e-10!128;UBERON:0004119!2.90e-10!130;UBERON:0000925!2.90e-10!130;UBERON:0006595!2.90e-10!130;UBERON:0000485!4.44e-10!11;UBERON:0004921!3.71e-09!126;UBERON:0004185!3.71e-09!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.10e-41,31;UBERON:0005409,1.77e-39,47;UBERON:0000344,4.82e-23,15;UBERON:0001242,7.66e-19,13;UBERON:0001262,7.66e-19,13;UBERON:0004786,7.66e-19,13;UBERON:0001007,6.82e-14,116;UBERON:0001555,6.82e-14,116;UBERON:0007026,6.82e-14,116;UBERON:0004119,1.59e-13,118;UBERON:0000925,1.59e-13,118;UBERON:0006595,1.59e-13,118;UBERON:0004923,3.27e-13,24;UBERON:0004921,7.15e-12,114;UBERON:0003350,4.34e-11,9;UBERON:0004808,4.34e-11,9;UBERON:0001277,4.34e-11,9;UBERON:0002108,1.16e-09,4;UBERON:0000485,7.16e-09,11;UBERON:0000331,3.65e-08,3;UBERON:0002116,3.65e-08,3;UBERON:0001204,3.65e-08,3;UBERON:0001168,3.65e-08,3 | |||
|phase1_expression=0,6.2815573375085,3.63999391511629,7.25914107136392,4.50806156951712,4.36486106970913,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,9.5995453676044,6.8822784320151,4.01962374880514,4.73838195774982,6.24866574789078,17.6721780094428,6.80481350351813,10.199603490144,0,0,0,0.866554859253824,2.65975432573588,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,4.11061966988616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31958806090611,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,5.30717792710717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,5.81791246659797,0,0,0.902072229254653,1.4117846723634,1.77902435075896,3.42406127002606,4.2707615539006,2.79988223030818,4.02136334080431,2.38747766449381,3.31438948102504,4.49409704327111,5.40345124686736,5.97423819763102,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,17.184071124272,0,0,0.540026704109006,1.04544148007234,0.218362563746178,1.07891477107857,1.23980183588004,1.30877970992015,16.0722566881823,0,12.4012446510522,0,0,0,0,0,0,0,0,5.55643477899814,6.04863013141517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0.685738504770831,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0,0.492522411877817,0,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0,0,0 | |||
|short_description=p@chr11:58200225..58200263,+ | |||
}} |
Latest revision as of 04:09, 6 August 2015
Short description: | p@chr11:58200225..58200263, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:58200225..58200263, + |
Coexpression cluster: | MCL_coexpression_mm9:1293 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.31e-13 | 6 |
gut absorptive cell | 5.31e-13 | 6 |
enterocyte | 5.31e-13 | 6 |
intestinal epithelial cell | 4.34e-11 | 9 |
epithelial cell of alimentary canal | 4.34e-11 | 9 |
columnar/cuboidal epithelial cell | 4.95e-11 | 7 |
M cell of gut | 3.24e-07 | 3 |
epithelial cell | 7.54e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.10e-41 | 31 |
gastrointestinal system | 1.77e-39 | 47 |
mucosa | 4.82e-23 | 15 |
intestinal mucosa | 7.66e-19 | 13 |
wall of intestine | 7.66e-19 | 13 |
gastrointestinal system mucosa | 7.66e-19 | 13 |
digestive system | 6.82e-14 | 116 |
digestive tract | 6.82e-14 | 116 |
primitive gut | 6.82e-14 | 116 |
endoderm-derived structure | 1.59e-13 | 118 |
endoderm | 1.59e-13 | 118 |
presumptive endoderm | 1.59e-13 | 118 |
organ component layer | 3.27e-13 | 24 |
subdivision of digestive tract | 7.15e-12 | 114 |
epithelium of mucosa | 4.34e-11 | 9 |
gastrointestinal system epithelium | 4.34e-11 | 9 |
intestinal epithelium | 4.34e-11 | 9 |
small intestine | 1.16e-09 | 4 |
simple columnar epithelium | 7.16e-09 | 11 |
ileal mucosa | 3.65e-08 | 3 |
ileum | 3.65e-08 | 3 |
mucosa of small intestine | 3.65e-08 | 3 |
wall of small intestine | 3.65e-08 | 3 |