FFCP PHASE1:Mm9::chr1:88997137..88997146,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:88997137..88997146,-|id=chr1:88997137..88997146,-|ontology_enrichment_celltype=CL:0000239!2.20e-15!6;CL:0000677!2.20e-15!6;CL:0000212!2.20e-15!6;CL:0000584!2.20e-15!6;CL:0002563!2.91e-13!9;CL:0002251!2.91e-13!9;CL:0000075!4.37e-13!7;CL:0000066!2.65e-08!25;CL:0000473!7.00e-08!3;CL:0000627!7.00e-08!3;CL:0000682!7.00e-08!3;CL:0002076!1.51e-07!15|ontology_enrichment_celltype_v019_2=CL:0000239,6.12e-16,6;CL:0000677,6.12e-16,6;CL:0000584,6.12e-16,6;CL:0000075,1.05e-13,7;CL:0002563,1.03e-10,9;CL:0002251,1.03e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.62e-30!43;UBERON:0000344!4.51e-23!15;UBERON:0005409!1.73e-20!59;UBERON:0001242!3.03e-18!13;UBERON:0000060!3.03e-18!13;UBERON:0001262!3.03e-18!13;UBERON:0004786!3.03e-18!13;UBERON:0004923!1.99e-13!24;UBERON:0003350!2.91e-13!9;UBERON:0004808!2.91e-13!9;UBERON:0001277!2.91e-13!9;UBERON:0000485!1.16e-10!11;UBERON:0001007!2.56e-08!128;UBERON:0001555!2.56e-08!128;UBERON:0007026!2.56e-08!128;UBERON:0004119!4.22e-08!130;UBERON:0000925!4.22e-08!130;UBERON:0006595!4.22e-08!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.43e-30,31;UBERON:0000344,1.51e-24,15;UBERON:0005409,1.11e-19,47;UBERON:0001242,4.77e-16,13;UBERON:0001262,4.77e-16,13;UBERON:0004786,4.77e-16,13;UBERON:0004923,4.58e-15,24;UBERON:0001962,4.21e-13,2;UBERON:0001961,4.21e-13,2;UBERON:0001744,4.21e-13,2;UBERON:0003350,1.03e-10,9;UBERON:0004808,1.03e-10,9;UBERON:0001277,1.03e-10,9;UBERON:0001007,7.30e-10,116;UBERON:0001555,7.30e-10,116;UBERON:0007026,7.30e-10,116;UBERON:0004119,1.15e-09,118;UBERON:0000925,1.15e-09,118;UBERON:0006595,1.15e-09,118;UBERON:0002465,4.94e-09,3;UBERON:0000485,8.35e-09,11;UBERON:0003199,2.11e-07,1;UBERON:0004921,3.64e-07,114|phase1_expression=0,1.04692622291808,1.81999695755814,2.41971369045464,2.00358291978539,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,2.2940928106717,0.57423196411502,0.430761996159075,0.430942465371778,1.14014051673824,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,2.11560453330835,0,0,0,0,0.444756087689741,0.760902504450237,2.84717436926707,1.15289268306808,0.502670417600539,0.795825888164603,0.38992817423824,2.69645822596266,0.648414149624083,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0.476293691283074,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0|short_description=p@chr1:88997137..88997146,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:88997137..88997146,- | |||
|description=CAGE_peak_at_chr1:88997137..88997146,- | |||
|id=chr1:88997137..88997146,- | |||
|ontology_enrichment_celltype=CL:0000239!2.20e-15!6;CL:0000677!2.20e-15!6;CL:0000212!2.20e-15!6;CL:0000584!2.20e-15!6;CL:0002563!2.91e-13!9;CL:0002251!2.91e-13!9;CL:0000075!4.37e-13!7;CL:0000066!2.65e-08!25;CL:0000473!7.00e-08!3;CL:0000627!7.00e-08!3;CL:0000682!7.00e-08!3;CL:0002076!1.51e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.12e-16,6;CL:0000677,6.12e-16,6;CL:0000584,6.12e-16,6;CL:0000075,1.05e-13,7;CL:0002563,1.03e-10,9;CL:0002251,1.03e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.62e-30!43;UBERON:0000344!4.51e-23!15;UBERON:0005409!1.73e-20!59;UBERON:0001242!3.03e-18!13;UBERON:0000060!3.03e-18!13;UBERON:0001262!3.03e-18!13;UBERON:0004786!3.03e-18!13;UBERON:0004923!1.99e-13!24;UBERON:0003350!2.91e-13!9;UBERON:0004808!2.91e-13!9;UBERON:0001277!2.91e-13!9;UBERON:0000485!1.16e-10!11;UBERON:0001007!2.56e-08!128;UBERON:0001555!2.56e-08!128;UBERON:0007026!2.56e-08!128;UBERON:0004119!4.22e-08!130;UBERON:0000925!4.22e-08!130;UBERON:0006595!4.22e-08!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.43e-30,31;UBERON:0000344,1.51e-24,15;UBERON:0005409,1.11e-19,47;UBERON:0001242,4.77e-16,13;UBERON:0001262,4.77e-16,13;UBERON:0004786,4.77e-16,13;UBERON:0004923,4.58e-15,24;UBERON:0001962,4.21e-13,2;UBERON:0001961,4.21e-13,2;UBERON:0001744,4.21e-13,2;UBERON:0003350,1.03e-10,9;UBERON:0004808,1.03e-10,9;UBERON:0001277,1.03e-10,9;UBERON:0001007,7.30e-10,116;UBERON:0001555,7.30e-10,116;UBERON:0007026,7.30e-10,116;UBERON:0004119,1.15e-09,118;UBERON:0000925,1.15e-09,118;UBERON:0006595,1.15e-09,118;UBERON:0002465,4.94e-09,3;UBERON:0000485,8.35e-09,11;UBERON:0003199,2.11e-07,1;UBERON:0004921,3.64e-07,114 | |||
|phase1_expression=0,1.04692622291808,1.81999695755814,2.41971369045464,2.00358291978539,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,2.2940928106717,0.57423196411502,0.430761996159075,0.430942465371778,1.14014051673824,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,2.11560453330835,0,0,0,0,0.444756087689741,0.760902504450237,2.84717436926707,1.15289268306808,0.502670417600539,0.795825888164603,0.38992817423824,2.69645822596266,0.648414149624083,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0.476293691283074,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | |||
|short_description=p@chr1:88997137..88997146,- | |||
}} |
Latest revision as of 03:31, 6 August 2015
Short description: | p@chr1:88997137..88997146, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:88997137..88997146, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.12e-16 | 6 |
gut absorptive cell | 6.12e-16 | 6 |
enterocyte | 6.12e-16 | 6 |
columnar/cuboidal epithelial cell | 1.05e-13 | 7 |
intestinal epithelial cell | 1.03e-10 | 9 |
epithelial cell of alimentary canal | 1.03e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.43e-30 | 31 |
mucosa | 1.51e-24 | 15 |
gastrointestinal system | 1.11e-19 | 47 |
intestinal mucosa | 4.77e-16 | 13 |
wall of intestine | 4.77e-16 | 13 |
gastrointestinal system mucosa | 4.77e-16 | 13 |
organ component layer | 4.58e-15 | 24 |
gut-associated lymphoid tissue | 4.21e-13 | 2 |
mucosa-associated lymphoid tissue | 4.21e-13 | 2 |
lymphoid tissue | 4.21e-13 | 2 |
epithelium of mucosa | 1.03e-10 | 9 |
gastrointestinal system epithelium | 1.03e-10 | 9 |
intestinal epithelium | 1.03e-10 | 9 |
digestive system | 7.30e-10 | 116 |
digestive tract | 7.30e-10 | 116 |
primitive gut | 7.30e-10 | 116 |
endoderm-derived structure | 1.15e-09 | 118 |
endoderm | 1.15e-09 | 118 |
presumptive endoderm | 1.15e-09 | 118 |
lymphoid system | 4.94e-09 | 3 |
simple columnar epithelium | 8.35e-09 | 11 |
egg chamber | 2.11e-07 | 1 |
subdivision of digestive tract | 3.64e-07 | 114 |