FFCP PHASE1:Mm9::chrX:149079031..149079087,-: Difference between revisions
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{{FFCP|EntrezGene=110380|HGNC=|MCL_coexpression_id=87|UniProt=|association_with_transcript=0bp_to_ENSMUST00000137217_5end|description=CAGE_peak_3_at_Shroom2_5end|id=chrX:149079031..149079087,-|ontology_enrichment_celltype=CL:0000540!7.35e-20!33;CL:0000047!7.35e-20!33;CL:0000031!7.35e-20!33;CL:0000404!7.35e-20!33;CL:0000117!1.38e-18!23;CL:0000337!1.38e-18!23;CL:0000393!1.70e-17!39;CL:0000211!1.70e-17!39;CL:0000221!1.75e-15!44;CL:0000133!1.75e-15!44;CL:0002319!2.14e-15!43;CL:0000055!1.69e-13!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.46e-23,23;CL:0000337,3.46e-23,23;CL:0000540,4.16e-20,33;CL:0000047,4.16e-20,33;CL:0000031,4.16e-20,33;CL:0000404,4.16e-20,33;CL:0000393,1.60e-15,39;CL:0000211,1.60e-15,39;CL:0002319,3.29e-13,43;CL:0000221,1.06e-12,44;CL:0000133,1.06e-12,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.67e-29!75;UBERON:0001016!2.67e-29!75;UBERON:0001017!4.73e-29!73;UBERON:0005743!4.73e-29!73;UBERON:0004121!1.04e-24!102;UBERON:0000924!1.04e-24!102;UBERON:0006601!1.04e-24!102;UBERON:0002020!5.77e-23!34;UBERON:0002346!1.14e-21!71;UBERON:0003075!1.14e-21!71;UBERON:0007284!1.14e-21!71;UBERON:0001049!2.95e-21!52;UBERON:0005068!2.95e-21!52;UBERON:0006241!2.95e-21!52;UBERON:0007135!2.95e-21!52;UBERON:0000033!1.69e-19!63;UBERON:0000955!4.13e-19!50;UBERON:0006238!4.13e-19!50;UBERON:0002616!2.29e-18!49;UBERON:0002791!3.56e-18!29;UBERON:0003528!3.56e-18!29;UBERON:0001893!3.56e-18!29;UBERON:0003056!9.68e-17!49;UBERON:0003080!1.82e-15!40;UBERON:0002780!1.07e-14!39;UBERON:0001890!1.07e-14!39;UBERON:0006240!1.07e-14!39;UBERON:0000956!6.25e-12!21;UBERON:0001869!6.25e-12!21;UBERON:0000203!6.25e-12!21;UBERON:0002619!3.20e-10!17;UBERON:0007811!1.30e-09!86;UBERON:0002021!5.40e-09!10;UBERON:0000411!5.40e-09!10;UBERON:0001950!5.40e-09!10;UBERON:0002420!1.29e-07!8;UBERON:0007245!1.29e-07!8;UBERON:0010009!1.29e-07!8;UBERON:0010011!1.29e-07!8;UBERON:0000454!1.29e-07!8;UBERON:0000153!1.71e-07!94;UBERON:0002240!6.17e-07!6;UBERON:0005174!6.17e-07!6;UBERON:0001137!6.17e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.49e-29,34;UBERON:0001017,4.69e-28,73;UBERON:0001016,7.63e-27,75;UBERON:0000073,6.43e-26,54;UBERON:0001049,6.11e-24,52;UBERON:0005068,6.11e-24,52;UBERON:0006241,6.11e-24,52;UBERON:0007135,6.11e-24,52;UBERON:0002346,3.52e-23,64;UBERON:0003075,3.52e-23,64;UBERON:0007284,3.52e-23,64;UBERON:0003528,4.58e-23,29;UBERON:0002791,4.58e-23,29;UBERON:0001893,4.58e-23,29;UBERON:0004121,3.42e-22,95;UBERON:0000924,3.42e-22,95;UBERON:0006601,3.42e-22,95;UBERON:0003080,1.58e-18,40;UBERON:0000955,1.63e-18,47;UBERON:0006238,1.63e-18,47;UBERON:0010371,1.72e-18,73;UBERON:0003056,1.90e-18,49;UBERON:0002616,1.22e-17,46;UBERON:0002780,1.46e-17,39;UBERON:0001890,1.46e-17,39;UBERON:0006240,1.46e-17,39;UBERON:0000956,4.27e-15,21;UBERON:0001869,4.27e-15,21;UBERON:0000203,4.27e-15,21;UBERON:0002619,6.24e-13,17;UBERON:0010314,9.12e-12,92;UBERON:0002021,5.32e-11,10;UBERON:0000411,5.32e-11,10;UBERON:0001950,5.32e-11,10;UBERON:0002420,2.97e-09,8;UBERON:0007245,2.97e-09,8;UBERON:0010009,2.97e-09,8;UBERON:0010011,2.97e-09,8;UBERON:0000454,2.97e-09,8;UBERON:0002240,2.15e-08,6;UBERON:0005174,2.15e-08,6;UBERON:0001137,2.15e-08,6;UBERON:0001948,2.12e-07,5;UBERON:0002315,2.12e-07,5;UBERON:0000369,9.90e-07,5;UBERON:0002435,9.90e-07,5;UBERON:0000204,9.90e-07,5;UBERON:0010082,9.90e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,18.4107979382234,33.3264316941381,30.4239073682966,0,0,0,0,0.7104801149461,0.599200221036809,0.384218305321555,2.28117147078651,2.43010688997043,1.89292465216244,19.7099179238624,26.5042249141936,8.20688354740192,5.65488279007595,8.27296907949019,12.1127469099328,12.1302971180928,13.0565553267807,17.1452174049252,18.2060410768795,14.0646610050325,8.65467296904281,7.87867654044352,8.86229837105499,52.1492596288392,48.406371471695,37.0934897192348,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0.608930956624282,0,0.60289056221049,0.23517741427141,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,13.1815762676244,9.15001205637253,18.7224984648168,9.03886464999838,5.11430914660661,6.64921742590592,7.62533936418461,0,0,0,0,0,0.689706313300419,0.900310649026746,1.65775299619287,2.51735046859913,3.33095672740609,2.52994656311268,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,8.20130799400096,13.377599609307,0,0,0,0,0.257734922644187,0,0,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,11.2385412991454,10.5490517932983,0,0,0,1.17131623288992,0.861693590931196,0.955875191810208,0.445597348164788,1.98153571552183,7.2865926301481,1.46127928955656,3.16230222357219,10.2822821254978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.658196082408484,0,0,0,0,0,0,0,0,0,0,13.1651964427462,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0.209088296014469,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.5433366030021,21.6352861158373,13.1765968091061,10.998603669996,10.2762377965596,14.3524840504043,9.45031500324528,6.30449684513909,8.15656336171568,7.7664046762773,0.415149390336707,0.399024873401031,1.53660245178721,1.70174701947806,3.77303692730368,4.77993121970037,2.44471400581777,3.29656091582231,4.1719497246936,4.04315538822076,4.56262739802432,3.9611531691076,3.27745276144588,3.39333307745807,3.0440798546475,2.38146845641537,3.47652977834566,2.31491064556446,5.76920261124629,3.23837624295674,3.08582327146874,3.19456451086807,1.66905332963125,3.34296758254356,3.67026583619789,3.46919892355874,2.56099162021882,3.6829759601298,2.30866993537965,2.80571135828869,3.08451047122853,1.87158516513571,4.09231043169689,2.01417893541756,2.70069255373598,4.99621155875892,2.57324769289949,2.14871054048298,2.67803664896381,2.42650561031467,0.695603506861264|short_description=p3@Shroom2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:110380 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000137217_5end | |||
|cluster_id=chrX:149079031..149079087,- | |||
|description=CAGE_peak_3_at_Shroom2_5end | |||
|id=chrX:149079031..149079087,- | |||
|ontology_enrichment_celltype=CL:0000540!7.35e-20!33;CL:0000047!7.35e-20!33;CL:0000031!7.35e-20!33;CL:0000404!7.35e-20!33;CL:0000117!1.38e-18!23;CL:0000337!1.38e-18!23;CL:0000393!1.70e-17!39;CL:0000211!1.70e-17!39;CL:0000221!1.75e-15!44;CL:0000133!1.75e-15!44;CL:0002319!2.14e-15!43;CL:0000055!1.69e-13!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.46e-23,23;CL:0000337,3.46e-23,23;CL:0000540,4.16e-20,33;CL:0000047,4.16e-20,33;CL:0000031,4.16e-20,33;CL:0000404,4.16e-20,33;CL:0000393,1.60e-15,39;CL:0000211,1.60e-15,39;CL:0002319,3.29e-13,43;CL:0000221,1.06e-12,44;CL:0000133,1.06e-12,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.67e-29!75;UBERON:0001016!2.67e-29!75;UBERON:0001017!4.73e-29!73;UBERON:0005743!4.73e-29!73;UBERON:0004121!1.04e-24!102;UBERON:0000924!1.04e-24!102;UBERON:0006601!1.04e-24!102;UBERON:0002020!5.77e-23!34;UBERON:0002346!1.14e-21!71;UBERON:0003075!1.14e-21!71;UBERON:0007284!1.14e-21!71;UBERON:0001049!2.95e-21!52;UBERON:0005068!2.95e-21!52;UBERON:0006241!2.95e-21!52;UBERON:0007135!2.95e-21!52;UBERON:0000033!1.69e-19!63;UBERON:0000955!4.13e-19!50;UBERON:0006238!4.13e-19!50;UBERON:0002616!2.29e-18!49;UBERON:0002791!3.56e-18!29;UBERON:0003528!3.56e-18!29;UBERON:0001893!3.56e-18!29;UBERON:0003056!9.68e-17!49;UBERON:0003080!1.82e-15!40;UBERON:0002780!1.07e-14!39;UBERON:0001890!1.07e-14!39;UBERON:0006240!1.07e-14!39;UBERON:0000956!6.25e-12!21;UBERON:0001869!6.25e-12!21;UBERON:0000203!6.25e-12!21;UBERON:0002619!3.20e-10!17;UBERON:0007811!1.30e-09!86;UBERON:0002021!5.40e-09!10;UBERON:0000411!5.40e-09!10;UBERON:0001950!5.40e-09!10;UBERON:0002420!1.29e-07!8;UBERON:0007245!1.29e-07!8;UBERON:0010009!1.29e-07!8;UBERON:0010011!1.29e-07!8;UBERON:0000454!1.29e-07!8;UBERON:0000153!1.71e-07!94;UBERON:0002240!6.17e-07!6;UBERON:0005174!6.17e-07!6;UBERON:0001137!6.17e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.49e-29,34;UBERON:0001017,4.69e-28,73;UBERON:0001016,7.63e-27,75;UBERON:0000073,6.43e-26,54;UBERON:0001049,6.11e-24,52;UBERON:0005068,6.11e-24,52;UBERON:0006241,6.11e-24,52;UBERON:0007135,6.11e-24,52;UBERON:0002346,3.52e-23,64;UBERON:0003075,3.52e-23,64;UBERON:0007284,3.52e-23,64;UBERON:0003528,4.58e-23,29;UBERON:0002791,4.58e-23,29;UBERON:0001893,4.58e-23,29;UBERON:0004121,3.42e-22,95;UBERON:0000924,3.42e-22,95;UBERON:0006601,3.42e-22,95;UBERON:0003080,1.58e-18,40;UBERON:0000955,1.63e-18,47;UBERON:0006238,1.63e-18,47;UBERON:0010371,1.72e-18,73;UBERON:0003056,1.90e-18,49;UBERON:0002616,1.22e-17,46;UBERON:0002780,1.46e-17,39;UBERON:0001890,1.46e-17,39;UBERON:0006240,1.46e-17,39;UBERON:0000956,4.27e-15,21;UBERON:0001869,4.27e-15,21;UBERON:0000203,4.27e-15,21;UBERON:0002619,6.24e-13,17;UBERON:0010314,9.12e-12,92;UBERON:0002021,5.32e-11,10;UBERON:0000411,5.32e-11,10;UBERON:0001950,5.32e-11,10;UBERON:0002420,2.97e-09,8;UBERON:0007245,2.97e-09,8;UBERON:0010009,2.97e-09,8;UBERON:0010011,2.97e-09,8;UBERON:0000454,2.97e-09,8;UBERON:0002240,2.15e-08,6;UBERON:0005174,2.15e-08,6;UBERON:0001137,2.15e-08,6;UBERON:0001948,2.12e-07,5;UBERON:0002315,2.12e-07,5;UBERON:0000369,9.90e-07,5;UBERON:0002435,9.90e-07,5;UBERON:0000204,9.90e-07,5;UBERON:0010082,9.90e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,18.4107979382234,33.3264316941381,30.4239073682966,0,0,0,0,0.7104801149461,0.599200221036809,0.384218305321555,2.28117147078651,2.43010688997043,1.89292465216244,19.7099179238624,26.5042249141936,8.20688354740192,5.65488279007595,8.27296907949019,12.1127469099328,12.1302971180928,13.0565553267807,17.1452174049252,18.2060410768795,14.0646610050325,8.65467296904281,7.87867654044352,8.86229837105499,52.1492596288392,48.406371471695,37.0934897192348,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0.608930956624282,0,0.60289056221049,0.23517741427141,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,13.1815762676244,9.15001205637253,18.7224984648168,9.03886464999838,5.11430914660661,6.64921742590592,7.62533936418461,0,0,0,0,0,0.689706313300419,0.900310649026746,1.65775299619287,2.51735046859913,3.33095672740609,2.52994656311268,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,8.20130799400096,13.377599609307,0,0,0,0,0.257734922644187,0,0,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,11.2385412991454,10.5490517932983,0,0,0,1.17131623288992,0.861693590931196,0.955875191810208,0.445597348164788,1.98153571552183,7.2865926301481,1.46127928955656,3.16230222357219,10.2822821254978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.658196082408484,0,0,0,0,0,0,0,0,0,0,13.1651964427462,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0.209088296014469,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.5433366030021,21.6352861158373,13.1765968091061,10.998603669996,10.2762377965596,14.3524840504043,9.45031500324528,6.30449684513909,8.15656336171568,7.7664046762773,0.415149390336707,0.399024873401031,1.53660245178721,1.70174701947806,3.77303692730368,4.77993121970037,2.44471400581777,3.29656091582231,4.1719497246936,4.04315538822076,4.56262739802432,3.9611531691076,3.27745276144588,3.39333307745807,3.0440798546475,2.38146845641537,3.47652977834566,2.31491064556446,5.76920261124629,3.23837624295674,3.08582327146874,3.19456451086807,1.66905332963125,3.34296758254356,3.67026583619789,3.46919892355874,2.56099162021882,3.6829759601298,2.30866993537965,2.80571135828869,3.08451047122853,1.87158516513571,4.09231043169689,2.01417893541756,2.70069255373598,4.99621155875892,2.57324769289949,2.14871054048298,2.67803664896381,2.42650561031467,0.695603506861264 | |||
|short_description=p3@Shroom2 | |||
}} |
Revision as of 02:38, 6 August 2015
Short description: | p3@Shroom2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Shroom2_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | 0bp_to_ENSMUST00000137217_5end |
EntrezGene: | 110380 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.46e-23 | 23 |
neuroblast (sensu Vertebrata) | 3.46e-23 | 23 |
neuron | 4.16e-20 | 33 |
neuronal stem cell | 4.16e-20 | 33 |
neuroblast | 4.16e-20 | 33 |
electrically signaling cell | 4.16e-20 | 33 |
electrically responsive cell | 1.60e-15 | 39 |
electrically active cell | 1.60e-15 | 39 |
neural cell | 3.29e-13 | 43 |
ectodermal cell | 1.06e-12 | 44 |
neurectodermal cell | 1.06e-12 | 44 |