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FFCP PHASE1:Mm9::chr13:51888984..51888993,-: Difference between revisions

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{{FFCP|EntrezGene=20354|HGNC=|UniProt=O09126|association_with_transcript=19bp_to_NM_013660,uc007qmo.1,uc007qmp.1_5end|description=CAGE_peak_3_at_Sema4d_5end|id=chr13:51888984..51888993,-|ontology_enrichment_celltype=CL:0000542!1.19e-07!13;CL:0000051!1.19e-07!13;CL:0000838!1.20e-07!12;CL:0000084!1.45e-07!11;CL:0000827!1.45e-07!11|ontology_enrichment_celltype_v019_2=CL:0000084,7.30e-14,11;CL:0000827,7.30e-14,11;CL:0000838,1.56e-12,12;CL:0000542,2.08e-11,13;CL:0000051,2.08e-11,13;CL:0000791,2.03e-10,9;CL:0000789,2.03e-10,9;CL:0002420,2.03e-10,9;CL:0002419,2.03e-10,9;CL:0000790,2.03e-10,9;CL:0000624,4.05e-09,8;CL:0000738,3.02e-08,17;CL:0002087,3.02e-08,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!2.72e-17!86;UBERON:0000153!1.08e-15!94;UBERON:0000033!2.43e-10!63;UBERON:0002346!2.00e-08!71;UBERON:0003075!2.00e-08!71;UBERON:0007284!2.00e-08!71;UBERON:0003056!9.86e-08!49;UBERON:0006562!1.35e-07!24;UBERON:0001557!1.35e-07!24;UBERON:0001042!1.35e-07!24;UBERON:0008814!1.35e-07!24;UBERON:0009145!1.35e-07!24;UBERON:0003408!1.56e-07!24;UBERON:0004121!2.01e-07!102;UBERON:0000924!2.01e-07!102;UBERON:0006601!2.01e-07!102;UBERON:0002370!2.64e-07!23;UBERON:0000974!2.64e-07!23;UBERON:0004807!2.64e-07!23;UBERON:0005058!2.64e-07!23;UBERON:0003351!2.64e-07!23;UBERON:0009113!2.64e-07!23;UBERON:0003295!2.64e-07!23;UBERON:0009722!2.64e-07!23;UBERON:0005562!2.64e-07!23;UBERON:0007690!2.64e-07!23;UBERON:0001049!4.50e-07!52;UBERON:0005068!4.50e-07!52;UBERON:0006241!4.50e-07!52;UBERON:0007135!4.50e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0007811,2.52e-12,36;UBERON:0002370,7.92e-11,23;UBERON:0000974,7.92e-11,23;UBERON:0004807,7.92e-11,23;UBERON:0005058,7.92e-11,23;UBERON:0003351,7.92e-11,23;UBERON:0009113,7.92e-11,23;UBERON:0003295,7.92e-11,23;UBERON:0009722,7.92e-11,23;UBERON:0005562,7.92e-11,23;UBERON:0007690,7.92e-11,23;UBERON:0006562,3.02e-10,24;UBERON:0003408,3.02e-10,24;UBERON:0001557,3.02e-10,24;UBERON:0001042,3.02e-10,24;UBERON:0008814,3.02e-10,24;UBERON:0009145,3.02e-10,24;UBERON:0000153,1.40e-09,43;UBERON:0000072,9.11e-09,27;UBERON:0004177,5.90e-08,29;UBERON:0005057,5.90e-08,29;UBERON:0002346,9.81e-08,64;UBERON:0003075,9.81e-08,64;UBERON:0007284,9.81e-08,64;UBERON:0003076,2.77e-07,12;UBERON:0003057,2.77e-07,12;UBERON:0000077,4.52e-07,35;UBERON:0010371,5.37e-07,73|phase1_expression=0.480446541314382,0,0,0,0,0,0,2.84071311571468,2.53419699873,4.91535505276186,0.34243593645101,0.717949430958028,3.25281386869291,1.48614684112296,0.333109761815663,0,0,0.630924330716475,0.411343300817216,0.84877930359606,0.425216450755349,3.77305614563364,1.82839852397255,0.159992422793407,0,0,0.430761996159075,0,0,0,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0,0.204169356262369,0,0,0.523523743973798,0,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0.139986421625363,0,0.503347818173209,2.17608642603403,1.34437519656986,0,0,0,0.202316460859598,0,0,0,0,0,0,0.7104801149461,0,0,0.622137673850866,0.135005938331691,0.210324961351382,1.42825492201902,1.54607978666129,0.122490799214954,0,0,0,1.27687338085188,0.46081959976873,0.263772575460388,0.0914876436024097,0,1.95428099300967,1.68828783009504,0.763991238884051,0.294628585473668,0.427115042397309,0.186399445825301,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0,0,0,1.29468941823586,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0.662524555381181,0.484875253135222,0,2.34224637609238,1.67557365450764,0.510914110417183,1.07833612055328,0,0.254140454146129,1.3481157546434,1.37250180845588,0,0.869121600961382,1.02286182932132,2.0778804455956,2.10913641988085,0.101839363850316,0.497627882440372,0,0.631325567659422,0.260240885925407,1.37941262660084,0.900310649026746,1.80845781402858,2.58538696775046,1.40925092313335,1.12442069471675,0.776110112217047,0.215567992932842,0,0.351902248327898,0,0,0,0.411564272815887,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0.234526059981096,0.36012412292203,0,0.196764231747404,0,0.232533944750408,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.486412857275134,0.584799949701329,0.219550115291051,0.134206418760372,0.841159794256509,0.411618449517138,0.991256348951394,0.264450566663544,0.426576501070468,0,0,0,0.667134131534611,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.398282546508734,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.631222379012867,0.885311519739602,0.442830443938806,1.09899109488962,1.1105744752962,0.296452627087149,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0.325929952884052,0,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0.491764273019036,1.65562047782839,2.24770825982909,2.57865710502847,0,0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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20354
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:O09126
|association_with_transcript=19bp_to_NM_013660,uc007qmo.1,uc007qmp.1_5end
|cluster_id=chr13:51888984..51888993,-
|description=CAGE_peak_3_at_Sema4d_5end
|id=chr13:51888984..51888993,-
|ontology_enrichment_celltype=CL:0000542!1.19e-07!13;CL:0000051!1.19e-07!13;CL:0000838!1.20e-07!12;CL:0000084!1.45e-07!11;CL:0000827!1.45e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000084,7.30e-14,11;CL:0000827,7.30e-14,11;CL:0000838,1.56e-12,12;CL:0000542,2.08e-11,13;CL:0000051,2.08e-11,13;CL:0000791,2.03e-10,9;CL:0000789,2.03e-10,9;CL:0002420,2.03e-10,9;CL:0002419,2.03e-10,9;CL:0000790,2.03e-10,9;CL:0000624,4.05e-09,8;CL:0000738,3.02e-08,17;CL:0002087,3.02e-08,17
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!2.72e-17!86;UBERON:0000153!1.08e-15!94;UBERON:0000033!2.43e-10!63;UBERON:0002346!2.00e-08!71;UBERON:0003075!2.00e-08!71;UBERON:0007284!2.00e-08!71;UBERON:0003056!9.86e-08!49;UBERON:0006562!1.35e-07!24;UBERON:0001557!1.35e-07!24;UBERON:0001042!1.35e-07!24;UBERON:0008814!1.35e-07!24;UBERON:0009145!1.35e-07!24;UBERON:0003408!1.56e-07!24;UBERON:0004121!2.01e-07!102;UBERON:0000924!2.01e-07!102;UBERON:0006601!2.01e-07!102;UBERON:0002370!2.64e-07!23;UBERON:0000974!2.64e-07!23;UBERON:0004807!2.64e-07!23;UBERON:0005058!2.64e-07!23;UBERON:0003351!2.64e-07!23;UBERON:0009113!2.64e-07!23;UBERON:0003295!2.64e-07!23;UBERON:0009722!2.64e-07!23;UBERON:0005562!2.64e-07!23;UBERON:0007690!2.64e-07!23;UBERON:0001049!4.50e-07!52;UBERON:0005068!4.50e-07!52;UBERON:0006241!4.50e-07!52;UBERON:0007135!4.50e-07!52
|ontology_enrichment_uberon_v019_2=UBERON:0007811,2.52e-12,36;UBERON:0002370,7.92e-11,23;UBERON:0000974,7.92e-11,23;UBERON:0004807,7.92e-11,23;UBERON:0005058,7.92e-11,23;UBERON:0003351,7.92e-11,23;UBERON:0009113,7.92e-11,23;UBERON:0003295,7.92e-11,23;UBERON:0009722,7.92e-11,23;UBERON:0005562,7.92e-11,23;UBERON:0007690,7.92e-11,23;UBERON:0006562,3.02e-10,24;UBERON:0003408,3.02e-10,24;UBERON:0001557,3.02e-10,24;UBERON:0001042,3.02e-10,24;UBERON:0008814,3.02e-10,24;UBERON:0009145,3.02e-10,24;UBERON:0000153,1.40e-09,43;UBERON:0000072,9.11e-09,27;UBERON:0004177,5.90e-08,29;UBERON:0005057,5.90e-08,29;UBERON:0002346,9.81e-08,64;UBERON:0003075,9.81e-08,64;UBERON:0007284,9.81e-08,64;UBERON:0003076,2.77e-07,12;UBERON:0003057,2.77e-07,12;UBERON:0000077,4.52e-07,35;UBERON:0010371,5.37e-07,73
|phase1_expression=0.480446541314382,0,0,0,0,0,0,2.84071311571468,2.53419699873,4.91535505276186,0.34243593645101,0.717949430958028,3.25281386869291,1.48614684112296,0.333109761815663,0,0,0.630924330716475,0.411343300817216,0.84877930359606,0.425216450755349,3.77305614563364,1.82839852397255,0.159992422793407,0,0,0.430761996159075,0,0,0,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0,0.204169356262369,0,0,0.523523743973798,0,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0.139986421625363,0,0.503347818173209,2.17608642603403,1.34437519656986,0,0,0,0.202316460859598,0,0,0,0,0,0,0.7104801149461,0,0,0.622137673850866,0.135005938331691,0.210324961351382,1.42825492201902,1.54607978666129,0.122490799214954,0,0,0,1.27687338085188,0.46081959976873,0.263772575460388,0.0914876436024097,0,1.95428099300967,1.68828783009504,0.763991238884051,0.294628585473668,0.427115042397309,0.186399445825301,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0,0,0,1.29468941823586,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0.662524555381181,0.484875253135222,0,2.34224637609238,1.67557365450764,0.510914110417183,1.07833612055328,0,0.254140454146129,1.3481157546434,1.37250180845588,0,0.869121600961382,1.02286182932132,2.0778804455956,2.10913641988085,0.101839363850316,0.497627882440372,0,0.631325567659422,0.260240885925407,1.37941262660084,0.900310649026746,1.80845781402858,2.58538696775046,1.40925092313335,1.12442069471675,0.776110112217047,0.215567992932842,0,0.351902248327898,0,0,0,0.411564272815887,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0.234526059981096,0.36012412292203,0,0.196764231747404,0,0.232533944750408,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.486412857275134,0.584799949701329,0.219550115291051,0.134206418760372,0.841159794256509,0.411618449517138,0.991256348951394,0.264450566663544,0.426576501070468,0,0,0,0.667134131534611,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.398282546508734,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.631222379012867,0.885311519739602,0.442830443938806,1.09899109488962,1.1105744752962,0.296452627087149,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0.325929952884052,0,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0.491764273019036,1.65562047782839,2.24770825982909,2.57865710502847,0,0.504941854408746,0.315508219416257,0,0.646270193198397,0,0,0.283076530788832,0,0.584511715822624,0.790575555893047,1.60660658210904,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0.428674070063185,0.177340233642274,0.891844088010353,0.164549020602121,0.304464949114599,0.704015124191131,0.63549621259146,0,0.32977250588296,0.322928853391811,0.180938774784468,0.358117032009409,0.328281799490123,0,2.22510362412612,0.683483523191411,0.206386867963223,0,0,0.410082683163076,0,1.35982743995084,0.979660166265606,0.967399816630967,0,0.158167996790568,0,0,0.627264888043406,0,0.134864346384821,0.0826534557253359,0,0.259229946583586,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.419437377702843,0.241584120826006,0,1.26404448251271,0.608175645870493,1.23253148597793,1.03936658382236,1.07416017400489,0.39736270956253,0.600977247599844,1.9199638532695,1.71642964911851,1.82896335972,0.907435666231565,0.487289403698762,1.44317762460494,1.75315353272353,0.680191150845634,0,0,0,0,1.50145980360946,0,1.07184189539533,0,1.12950368523413,1.38097570952153,1.14579102687879,0.515559547031063,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0,0,0,0.243106717068294,0,0,0.666740183404846,0,0.962757628775446,0,0,0.377252682772152,0.187283014939765,0.256100609619477,0.229741875822453,0.476293691283074,0.463537303779422,0,0,0.147198920134397,0.685738504770831,0.177475806159338,0.238436189947321,0,0,0.423073039458382,0.182927972872773,0.789209134313529,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0.578719832943424,0,0.233931608445408,0.214871054048298,0.191288332068843,0.661774257358546,1.62307484934295
|short_description=p3@Sema4d
}}

Revision as of 02:32, 6 August 2015

Short description:p3@Sema4d
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Sema4d_5end
Coexpression cluster:NA
Association with transcript: 19bp_to_NM_013660, uc007qmo.1, uc007qmp.1_5end
EntrezGene:20354
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p3@Sema4d

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.59
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A32.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D31.83
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
craniocervical region2.52e-1236
thymus7.92e-1123
neck7.92e-1123
respiratory system epithelium7.92e-1123
hemolymphoid system gland7.92e-1123
pharyngeal epithelium7.92e-1123
thymic region7.92e-1123
pharyngeal gland7.92e-1123
entire pharyngeal arch endoderm7.92e-1123
thymus primordium7.92e-1123
early pharyngeal endoderm7.92e-1123
pharynx3.02e-1024
gland of gut3.02e-1024
upper respiratory tract3.02e-1024
chordate pharynx3.02e-1024
pharyngeal arch system3.02e-1024
pharyngeal region of foregut3.02e-1024
anterior region of body1.40e-0943
segment of respiratory tract9.11e-0927
hemopoietic organ5.90e-0829
immune organ5.90e-0829
neurectoderm9.81e-0864
neural plate9.81e-0864
presumptive neural plate9.81e-0864
posterior neural tube2.77e-0712
chordal neural plate2.77e-0712
mixed endoderm/mesoderm-derived structure4.52e-0735
ecto-epithelium5.37e-0773
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