FFCP PHASE1:Mm9::chr11:53584769..53584779,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:53584769..53584779,+|id=chr11:53584769..53584779,+|ontology_enrichment_celltype=CL:0002563!1.48e-16!9;CL:0002251!1.48e-16!9;CL:0000239!6.91e-12!6;CL:0000677!6.91e-12!6;CL:0000212!6.91e-12!6;CL:0000584!6.91e-12!6;CL:0000075!4.71e-10!7;CL:0002076!3.92e-09!15;CL:0000066!6.83e-09!25;CL:0000473!8.91e-07!3;CL:0000627!8.91e-07!3;CL:0000682!8.91e-07!3|ontology_enrichment_celltype_v019_2=CL:0002563,3.15e-19,9;CL:0002251,3.15e-19,9;CL:0000239,1.28e-15,6;CL:0000677,1.28e-15,6;CL:0000584,1.28e-15,6;CL:0000075,2.32e-13,7;CL:0000066,4.07e-13,25;CL:0000682,9.21e-12,3;CL:0002076,3.20e-11,15;CL:0000223,3.27e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.03e-27!15;UBERON:0001242!2.96e-24!13;UBERON:0000060!2.96e-24!13;UBERON:0001262!2.96e-24!13;UBERON:0004786!2.96e-24!13;UBERON:0000160!6.90e-23!43;UBERON:0005409!3.68e-19!59;UBERON:0004923!8.87e-18!24;UBERON:0003350!1.48e-16!9;UBERON:0004808!1.48e-16!9;UBERON:0001277!1.48e-16!9;UBERON:0000485!3.55e-13!11;UBERON:0001007!1.98e-11!128;UBERON:0001555!1.98e-11!128;UBERON:0007026!1.98e-11!128;UBERON:0004119!4.11e-11!130;UBERON:0000925!4.11e-11!130;UBERON:0006595!4.11e-11!130;UBERON:0004921!7.43e-10!126;UBERON:0004185!7.43e-10!126;UBERON:0000331!3.20e-07!3;UBERON:0002116!3.20e-07!3;UBERON:0001204!3.20e-07!3;UBERON:0001168!3.20e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.50e-40,15;UBERON:0000160,1.37e-36,31;UBERON:0001242,1.54e-33,13;UBERON:0001262,1.54e-33,13;UBERON:0004786,1.54e-33,13;UBERON:0005409,9.44e-26,47;UBERON:0004923,3.01e-24,24;UBERON:0003350,3.15e-19,9;UBERON:0004808,3.15e-19,9;UBERON:0001277,3.15e-19,9;UBERON:0002108,7.31e-16,4;UBERON:0000485,1.36e-15,11;UBERON:0000331,1.26e-12,3;UBERON:0002116,1.26e-12,3;UBERON:0001204,1.26e-12,3;UBERON:0001168,1.26e-12,3;UBERON:0001007,9.37e-11,116;UBERON:0001555,9.37e-11,116;UBERON:0007026,9.37e-11,116;UBERON:0004119,1.65e-10,118;UBERON:0000925,1.65e-10,118;UBERON:0006595,1.65e-10,118;UBERON:0004921,1.38e-08,114;UBERON:0001962,3.52e-08,2;UBERON:0001961,3.52e-08,2;UBERON:0001744,3.52e-08,2|phase1_expression=0,7.32848356042658,1.36499771816861,6.95667686005709,4.50806156951712,1.51091344720701,0.934450562382103,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,2.23989391910769,2.52350209173887,3.44539178469012,2.58457197695445,2.37018355954478,8.36103045608045,10.3332353201572,2.88249663851896,0,0,0,0.866554859253824,1.66234645358492,1.22501613757421,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,18.1730330641089,5.28901133327089,0,0,0,0,0,0.190225626112559,5.69434873853414,0.164698954724011,0.502670417600539,0.397912944082302,0.58489226135736,1.79763881730844,4.32276099749388,3.38540164532424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538192240565737,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,1.29614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr11:53584769..53584779,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:53584769..53584779,+ | |||
|description=CAGE_peak_at_chr11:53584769..53584779,+ | |||
|id=chr11:53584769..53584779,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.48e-16!9;CL:0002251!1.48e-16!9;CL:0000239!6.91e-12!6;CL:0000677!6.91e-12!6;CL:0000212!6.91e-12!6;CL:0000584!6.91e-12!6;CL:0000075!4.71e-10!7;CL:0002076!3.92e-09!15;CL:0000066!6.83e-09!25;CL:0000473!8.91e-07!3;CL:0000627!8.91e-07!3;CL:0000682!8.91e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.15e-19,9;CL:0002251,3.15e-19,9;CL:0000239,1.28e-15,6;CL:0000677,1.28e-15,6;CL:0000584,1.28e-15,6;CL:0000075,2.32e-13,7;CL:0000066,4.07e-13,25;CL:0000682,9.21e-12,3;CL:0002076,3.20e-11,15;CL:0000223,3.27e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.03e-27!15;UBERON:0001242!2.96e-24!13;UBERON:0000060!2.96e-24!13;UBERON:0001262!2.96e-24!13;UBERON:0004786!2.96e-24!13;UBERON:0000160!6.90e-23!43;UBERON:0005409!3.68e-19!59;UBERON:0004923!8.87e-18!24;UBERON:0003350!1.48e-16!9;UBERON:0004808!1.48e-16!9;UBERON:0001277!1.48e-16!9;UBERON:0000485!3.55e-13!11;UBERON:0001007!1.98e-11!128;UBERON:0001555!1.98e-11!128;UBERON:0007026!1.98e-11!128;UBERON:0004119!4.11e-11!130;UBERON:0000925!4.11e-11!130;UBERON:0006595!4.11e-11!130;UBERON:0004921!7.43e-10!126;UBERON:0004185!7.43e-10!126;UBERON:0000331!3.20e-07!3;UBERON:0002116!3.20e-07!3;UBERON:0001204!3.20e-07!3;UBERON:0001168!3.20e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.50e-40,15;UBERON:0000160,1.37e-36,31;UBERON:0001242,1.54e-33,13;UBERON:0001262,1.54e-33,13;UBERON:0004786,1.54e-33,13;UBERON:0005409,9.44e-26,47;UBERON:0004923,3.01e-24,24;UBERON:0003350,3.15e-19,9;UBERON:0004808,3.15e-19,9;UBERON:0001277,3.15e-19,9;UBERON:0002108,7.31e-16,4;UBERON:0000485,1.36e-15,11;UBERON:0000331,1.26e-12,3;UBERON:0002116,1.26e-12,3;UBERON:0001204,1.26e-12,3;UBERON:0001168,1.26e-12,3;UBERON:0001007,9.37e-11,116;UBERON:0001555,9.37e-11,116;UBERON:0007026,9.37e-11,116;UBERON:0004119,1.65e-10,118;UBERON:0000925,1.65e-10,118;UBERON:0006595,1.65e-10,118;UBERON:0004921,1.38e-08,114;UBERON:0001962,3.52e-08,2;UBERON:0001961,3.52e-08,2;UBERON:0001744,3.52e-08,2 | |||
|phase1_expression=0,7.32848356042658,1.36499771816861,6.95667686005709,4.50806156951712,1.51091344720701,0.934450562382103,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,2.23989391910769,2.52350209173887,3.44539178469012,2.58457197695445,2.37018355954478,8.36103045608045,10.3332353201572,2.88249663851896,0,0,0,0.866554859253824,1.66234645358492,1.22501613757421,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,18.1730330641089,5.28901133327089,0,0,0,0,0,0.190225626112559,5.69434873853414,0.164698954724011,0.502670417600539,0.397912944082302,0.58489226135736,1.79763881730844,4.32276099749388,3.38540164532424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538192240565737,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,1.29614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr11:53584769..53584779,+ | |||
}} |
Latest revision as of 01:57, 6 August 2015
Short description: | p@chr11:53584769..53584779, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:53584769..53584779, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.15e-19 | 9 |
epithelial cell of alimentary canal | 3.15e-19 | 9 |
brush border epithelial cell | 1.28e-15 | 6 |
gut absorptive cell | 1.28e-15 | 6 |
enterocyte | 1.28e-15 | 6 |
columnar/cuboidal epithelial cell | 2.32e-13 | 7 |
epithelial cell | 4.07e-13 | 25 |
M cell of gut | 9.21e-12 | 3 |
endo-epithelial cell | 3.20e-11 | 15 |
endodermal cell | 3.27e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.50e-40 | 15 |
intestine | 1.37e-36 | 31 |
intestinal mucosa | 1.54e-33 | 13 |
wall of intestine | 1.54e-33 | 13 |
gastrointestinal system mucosa | 1.54e-33 | 13 |
gastrointestinal system | 9.44e-26 | 47 |
organ component layer | 3.01e-24 | 24 |
epithelium of mucosa | 3.15e-19 | 9 |
gastrointestinal system epithelium | 3.15e-19 | 9 |
intestinal epithelium | 3.15e-19 | 9 |
small intestine | 7.31e-16 | 4 |
simple columnar epithelium | 1.36e-15 | 11 |
ileal mucosa | 1.26e-12 | 3 |
ileum | 1.26e-12 | 3 |
mucosa of small intestine | 1.26e-12 | 3 |
wall of small intestine | 1.26e-12 | 3 |
digestive system | 9.37e-11 | 116 |
digestive tract | 9.37e-11 | 116 |
primitive gut | 9.37e-11 | 116 |
endoderm-derived structure | 1.65e-10 | 118 |
endoderm | 1.65e-10 | 118 |
presumptive endoderm | 1.65e-10 | 118 |
subdivision of digestive tract | 1.38e-08 | 114 |
gut-associated lymphoid tissue | 3.52e-08 | 2 |
mucosa-associated lymphoid tissue | 3.52e-08 | 2 |
lymphoid tissue | 3.52e-08 | 2 |