FFCP PHASE1:Mm9::chr6:67505591..67505606,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=419|UniProt=|association_with_transcript=-23bp_to_ENSMUST00000103302,uc012enb.1_5end|description=CAGE_peak_1_at_ENSMUST00000103302_5end,CAGE_peak_1_at_uc012enb.1_5end|id=chr6:67505591..67505606,+|ontology_enrichment_celltype=CL:0000553!1.86e-25!6;CL:0000556!1.86e-25!6;CL:0000050!8.20e-17!9;CL:0000414!1.16e-13!11;CL:0002027!3.87e-13!3;CL:0002006!3.87e-13!3;CL:0002024!3.87e-13!3;CL:0000839!1.78e-11!13;CL:0002031!8.02e-10!25;CL:0000763!3.21e-09!16;CL:0000049!1.13e-07!19;CL:0000988!2.00e-07!32;CL:0002032!2.00e-07!32;CL:0000037!2.00e-07!32;CL:0000566!2.00e-07!32;CL:0000837!2.00e-07!32|ontology_enrichment_celltype_v019_2=CL:0000553,3.46e-29,6;CL:0000556,3.46e-29,6;CL:0000050,1.71e-19,9;CL:0000839,1.66e-13,13;CL:0000763,5.72e-11,16;CL:0002027,3.67e-10,3;CL:0002006,3.67e-10,3;CL:0002024,3.67e-10,3;CL:0002031,8.51e-10,25;CL:0000049,3.15e-09,19;CL:0000945,4.10e-08,1;CL:0000236,4.10e-08,1;CL:0000826,4.10e-08,1;CL:0000988,1.40e-07,32;CL:0002032,1.40e-07,32;CL:0000037,1.40e-07,32;CL:0000837,1.40e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002465!1.99e-13!3;UBERON:0000331!6.77e-13!3;UBERON:0002116!6.77e-13!3;UBERON:0001204!6.77e-13!3;UBERON:0001168!6.77e-13!3;UBERON:0001962!1.14e-09!2;UBERON:0001961!1.14e-09!2;UBERON:0001744!1.14e-09!2;UBERON:0002371!3.21e-09!16;UBERON:0002193!2.78e-07!48;UBERON:0000344!7.93e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0002465,5.34e-21,3;UBERON:0001962,7.66e-15,2;UBERON:0001961,7.66e-15,2;UBERON:0001744,7.66e-15,2;UBERON:0002371,5.72e-11,16;UBERON:0002193,9.07e-11,48;UBERON:0002405,9.07e-11,48;UBERON:0000331,8.39e-10,3;UBERON:0002116,8.39e-10,3;UBERON:0001204,8.39e-10,3;UBERON:0001168,8.39e-10,3;UBERON:0003199,2.54e-08,1;UBERON:0001474,5.85e-08,22;UBERON:0004765,5.85e-08,22;UBERON:0001434,5.85e-08,22;UBERON:0000029,7.68e-08,1;UBERON:0001097,7.68e-08,1;UBERON:0003968,7.68e-08,1;UBERON:0001467,7.68e-08,1;UBERON:0002108,1.43e-07,4;UBERON:0002204,1.61e-07,32;UBERON:0000344,1.63e-07,15;UBERON:0004923,5.59e-07,24|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,39.6851524084059,4.89693314689703,58.2027695085949,59.0963208840734,33.1023928402464,0,0,0,22.7189240366637,36.0172571275457,0,0,0,3.42042155021473,1.76421090831952,0.443461021310609,0,0,0,0,0,0,1.25559489221072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1272170905819,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02522528478712,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000103302,p1@uc012enb.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=419 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-23bp_to_ENSMUST00000103302,uc012enb.1_5end | |||
|cluster_id=chr6:67505591..67505606,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000103302_5end,CAGE_peak_1_at_uc012enb.1_5end | |||
|id=chr6:67505591..67505606,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.86e-25!6;CL:0000556!1.86e-25!6;CL:0000050!8.20e-17!9;CL:0000414!1.16e-13!11;CL:0002027!3.87e-13!3;CL:0002006!3.87e-13!3;CL:0002024!3.87e-13!3;CL:0000839!1.78e-11!13;CL:0002031!8.02e-10!25;CL:0000763!3.21e-09!16;CL:0000049!1.13e-07!19;CL:0000988!2.00e-07!32;CL:0002032!2.00e-07!32;CL:0000037!2.00e-07!32;CL:0000566!2.00e-07!32;CL:0000837!2.00e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.46e-29,6;CL:0000556,3.46e-29,6;CL:0000050,1.71e-19,9;CL:0000839,1.66e-13,13;CL:0000763,5.72e-11,16;CL:0002027,3.67e-10,3;CL:0002006,3.67e-10,3;CL:0002024,3.67e-10,3;CL:0002031,8.51e-10,25;CL:0000049,3.15e-09,19;CL:0000945,4.10e-08,1;CL:0000236,4.10e-08,1;CL:0000826,4.10e-08,1;CL:0000988,1.40e-07,32;CL:0002032,1.40e-07,32;CL:0000037,1.40e-07,32;CL:0000837,1.40e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!1.99e-13!3;UBERON:0000331!6.77e-13!3;UBERON:0002116!6.77e-13!3;UBERON:0001204!6.77e-13!3;UBERON:0001168!6.77e-13!3;UBERON:0001962!1.14e-09!2;UBERON:0001961!1.14e-09!2;UBERON:0001744!1.14e-09!2;UBERON:0002371!3.21e-09!16;UBERON:0002193!2.78e-07!48;UBERON:0000344!7.93e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,5.34e-21,3;UBERON:0001962,7.66e-15,2;UBERON:0001961,7.66e-15,2;UBERON:0001744,7.66e-15,2;UBERON:0002371,5.72e-11,16;UBERON:0002193,9.07e-11,48;UBERON:0002405,9.07e-11,48;UBERON:0000331,8.39e-10,3;UBERON:0002116,8.39e-10,3;UBERON:0001204,8.39e-10,3;UBERON:0001168,8.39e-10,3;UBERON:0003199,2.54e-08,1;UBERON:0001474,5.85e-08,22;UBERON:0004765,5.85e-08,22;UBERON:0001434,5.85e-08,22;UBERON:0000029,7.68e-08,1;UBERON:0001097,7.68e-08,1;UBERON:0003968,7.68e-08,1;UBERON:0001467,7.68e-08,1;UBERON:0002108,1.43e-07,4;UBERON:0002204,1.61e-07,32;UBERON:0000344,1.63e-07,15;UBERON:0004923,5.59e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,39.6851524084059,4.89693314689703,58.2027695085949,59.0963208840734,33.1023928402464,0,0,0,22.7189240366637,36.0172571275457,0,0,0,3.42042155021473,1.76421090831952,0.443461021310609,0,0,0,0,0,0,1.25559489221072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1272170905819,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02522528478712,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000103302,p1@uc012enb.1 | |||
}} |
Latest revision as of 01:13, 6 August 2015
Short description: | p1@ENSMUST00000103302, p1@uc012enb.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103302_5end, CAGE_peak_1_at_uc012enb.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:419 |
Association with transcript: | -23bp_to_ENSMUST00000103302, uc012enb.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.46e-29 | 6 |
megakaryocyte | 3.46e-29 | 6 |
megakaryocyte-erythroid progenitor cell | 1.71e-19 | 9 |
myeloid lineage restricted progenitor cell | 1.66e-13 | 13 |
myeloid cell | 5.72e-11 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 3.67e-10 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.67e-10 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.67e-10 | 3 |
hematopoietic lineage restricted progenitor cell | 8.51e-10 | 25 |
common myeloid progenitor | 3.15e-09 | 19 |
lymphocyte of B lineage | 4.10e-08 | 1 |
B cell | 4.10e-08 | 1 |
pro-B cell | 4.10e-08 | 1 |
hematopoietic cell | 1.40e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.40e-07 | 32 |
hematopoietic stem cell | 1.40e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.40e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 5.34e-21 | 3 |
gut-associated lymphoid tissue | 7.66e-15 | 2 |
mucosa-associated lymphoid tissue | 7.66e-15 | 2 |
lymphoid tissue | 7.66e-15 | 2 |
bone marrow | 5.72e-11 | 16 |
hemolymphoid system | 9.07e-11 | 48 |
immune system | 9.07e-11 | 48 |
ileal mucosa | 8.39e-10 | 3 |
ileum | 8.39e-10 | 3 |
mucosa of small intestine | 8.39e-10 | 3 |
wall of small intestine | 8.39e-10 | 3 |
egg chamber | 2.54e-08 | 1 |
bone element | 5.85e-08 | 22 |
skeletal element | 5.85e-08 | 22 |
skeletal system | 5.85e-08 | 22 |
lymph node | 7.68e-08 | 1 |
axillary lymph node | 7.68e-08 | 1 |
peripheral lymph node | 7.68e-08 | 1 |
shoulder | 7.68e-08 | 1 |
small intestine | 1.43e-07 | 4 |
musculoskeletal system | 1.61e-07 | 32 |
mucosa | 1.63e-07 | 15 |
organ component layer | 5.59e-07 | 24 |