FFCP PHASE1:Mm9::chr1:74455956..74455973,+: Difference between revisions
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{{FFCP|EntrezGene=22349|HGNC=|MCL_coexpression_id=12|UniProt=Q62468,Q8CEJ4|association_with_transcript=0bp_to_NM_009509,uc007bmb.2_5end|description=CAGE_peak_1_at_Vil1_5end|id=chr1:74455956..74455973,+|ontology_enrichment_celltype=CL:0002563!9.20e-08!9;CL:0002251!9.20e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,4.13e-09,9;CL:0002251,4.13e-09,9;CL:0000239,5.25e-07,6;CL:0000677,5.25e-07,6;CL:0000584,5.25e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!3.44e-26!59;UBERON:0000160!1.38e-24!43;UBERON:0004119!3.89e-13!130;UBERON:0000925!3.89e-13!130;UBERON:0006595!3.89e-13!130;UBERON:0001007!1.42e-12!128;UBERON:0001555!1.42e-12!128;UBERON:0007026!1.42e-12!128;UBERON:0000344!2.05e-12!15;UBERON:0004921!1.67e-11!126;UBERON:0004185!1.67e-11!126;UBERON:0001242!6.30e-11!13;UBERON:0000060!6.30e-11!13;UBERON:0001262!6.30e-11!13;UBERON:0004786!6.30e-11!13;UBERON:0004923!6.98e-10!24;UBERON:0003350!9.20e-08!9;UBERON:0004808!9.20e-08!9;UBERON:0001277!9.20e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.79e-27,31;UBERON:0005409,4.11e-26,47;UBERON:0000344,9.09e-15,15;UBERON:0001242,5.88e-13,13;UBERON:0001262,5.88e-13,13;UBERON:0004786,5.88e-13,13;UBERON:0004923,6.84e-11,24;UBERON:0003350,4.13e-09,9;UBERON:0004808,4.13e-09,9;UBERON:0001277,4.13e-09,9;UBERON:0004119,3.68e-07,118;UBERON:0000925,3.68e-07,118;UBERON:0006595,3.68e-07,118;UBERON:0000485,7.06e-07,11|phase1_expression=0,1932.62580750678,1477.83752953721,1811.1556973053,1787.69686017851,382.093222871461,469.561407597007,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,14.1171861650776,0,0,1112.10733083697,1107.35859971123,1350.01934763441,1220.34873511866,1097.61045930192,2364.84145513457,1492.01836817879,853.440735512268,0,0,0,132.582893465835,145.787783979398,133.322589639327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,2.89864488701678,0,0,0,0,0,70.2222100658759,0,0,0,0,0,0,0,1.08245520505607,0,0,253.602396856032,0,0,0,0,0.922461989024234,0,0.352766121407114,2.38766523526383,52.4053331596873,0.433798070759735,0,0,0,0,635.595905753797,0,0,1603.75939259954,0,0,0,0,0,0,0,0,0,0,3.86989582631202,0.497627882440372,1.51633655060205,0,0,0,0,0,0,0,0,0,0,0.567318240503458,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0,2075.36037592124,1062.82682742078,6.39864751605702,15.0953836709285,84.0215847820049,232.944470939961,353.803467757189,396.430204818573,1321.08890733992,583.034299722999,412.943748058843,417.211721870293,401.820983552507,1320.36571131305,1094.52308456545,1135.30439882315,1.70701110857774,7.65465034485183,12.3978509240388,19.3468761453049,34.1356377415021,24.4072653218309,44.9611778953469,71.8861420660663,81.4823397496735,82.7994969915281,0.296452627087149,0.333690211432188,0.786235980452812,0.899448449539415,0.405720242777006,0.72353147925725,2.29163266603278,1.72617682470486,0.648540907100142,1.09824565275233,1.43768206527355,0,0.624075346229121,0.757736633841335,0.538192240565737,0,0,0,0.162964976442026,1.86719594352707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0.283880170416537,1.06839362200353,0.488660878060728,0,0,4.37005145078967,12.6975893925195,23.7642400492432,19.1946230372502,19.0609791725235,87.8656196771952,8.36127577798263,9.26893183800275,2.84433082142234,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,8.68285319835728,5.08396970073168,0,0,0,0,0,0.492422699235184,1068.2772662484,0,0.170870880797853,1.23832120777933,0.370389054739423,0,0,0,0,0,0,28.6401185404534,0.790839983952838,7.9294592179471,36.397799856947,19.2361232333311,50.2233896616208,17.262636337257,20.91132429851,15.4436005770577,428.247871756084,0,0,0,0,0,0.645799117388655,0.168956125490778,0.821500670520278,0.2604087696879,0.419437377702843,0.483168241652012,0.288030006257865,0.632022241256357,0.202725215290164,0,0.129920822977795,0,0,0.480781798079875,0.590758108698309,0.403865799792591,0.304827226619999,0.403304740547362,1.16949456887703,1.15454209968395,1.16876902181569,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.853668028770671,2.67417388775123,2.72497111416377,14.5236371675511,20.0022055021454,19.9854005521727,20.5388294138762,21.7319602116866,16.9831130926461,17.7308760902912,19.7583580761452,19.2075457214608,17.5752535004177,18.5754539600399,18.0779548473975,18.1334667235883,17.7196937345422,16.6334779751869,21.6007629002812,18.8124354528898,16.4520971063651,19.040380578835,19.4806417459734,19.6305890308689,16.2805895856768,20.2563677807139,19.1483800522665,23.0068331379673,17.0834426098811,18.3218337218548,10.6400071224119,16.2683683245264,15.8183421004536,0.499621155875892,24.7967504952133,28.1481080803271,1.53030665655075,0.441182838239031,0.463735671240843|short_description=p1@Vil1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22349 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q62468,uniprot:Q8CEJ4 | |||
|association_with_transcript=0bp_to_NM_009509,uc007bmb.2_5end | |||
|cluster_id=chr1:74455956..74455973,+ | |||
|description=CAGE_peak_1_at_Vil1_5end | |||
|id=chr1:74455956..74455973,+ | |||
|ontology_enrichment_celltype=CL:0002563!9.20e-08!9;CL:0002251!9.20e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.13e-09,9;CL:0002251,4.13e-09,9;CL:0000239,5.25e-07,6;CL:0000677,5.25e-07,6;CL:0000584,5.25e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.44e-26!59;UBERON:0000160!1.38e-24!43;UBERON:0004119!3.89e-13!130;UBERON:0000925!3.89e-13!130;UBERON:0006595!3.89e-13!130;UBERON:0001007!1.42e-12!128;UBERON:0001555!1.42e-12!128;UBERON:0007026!1.42e-12!128;UBERON:0000344!2.05e-12!15;UBERON:0004921!1.67e-11!126;UBERON:0004185!1.67e-11!126;UBERON:0001242!6.30e-11!13;UBERON:0000060!6.30e-11!13;UBERON:0001262!6.30e-11!13;UBERON:0004786!6.30e-11!13;UBERON:0004923!6.98e-10!24;UBERON:0003350!9.20e-08!9;UBERON:0004808!9.20e-08!9;UBERON:0001277!9.20e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.79e-27,31;UBERON:0005409,4.11e-26,47;UBERON:0000344,9.09e-15,15;UBERON:0001242,5.88e-13,13;UBERON:0001262,5.88e-13,13;UBERON:0004786,5.88e-13,13;UBERON:0004923,6.84e-11,24;UBERON:0003350,4.13e-09,9;UBERON:0004808,4.13e-09,9;UBERON:0001277,4.13e-09,9;UBERON:0004119,3.68e-07,118;UBERON:0000925,3.68e-07,118;UBERON:0006595,3.68e-07,118;UBERON:0000485,7.06e-07,11 | |||
|phase1_expression=0,1932.62580750678,1477.83752953721,1811.1556973053,1787.69686017851,382.093222871461,469.561407597007,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,14.1171861650776,0,0,1112.10733083697,1107.35859971123,1350.01934763441,1220.34873511866,1097.61045930192,2364.84145513457,1492.01836817879,853.440735512268,0,0,0,132.582893465835,145.787783979398,133.322589639327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,2.89864488701678,0,0,0,0,0,70.2222100658759,0,0,0,0,0,0,0,1.08245520505607,0,0,253.602396856032,0,0,0,0,0.922461989024234,0,0.352766121407114,2.38766523526383,52.4053331596873,0.433798070759735,0,0,0,0,635.595905753797,0,0,1603.75939259954,0,0,0,0,0,0,0,0,0,0,3.86989582631202,0.497627882440372,1.51633655060205,0,0,0,0,0,0,0,0,0,0,0.567318240503458,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0,2075.36037592124,1062.82682742078,6.39864751605702,15.0953836709285,84.0215847820049,232.944470939961,353.803467757189,396.430204818573,1321.08890733992,583.034299722999,412.943748058843,417.211721870293,401.820983552507,1320.36571131305,1094.52308456545,1135.30439882315,1.70701110857774,7.65465034485183,12.3978509240388,19.3468761453049,34.1356377415021,24.4072653218309,44.9611778953469,71.8861420660663,81.4823397496735,82.7994969915281,0.296452627087149,0.333690211432188,0.786235980452812,0.899448449539415,0.405720242777006,0.72353147925725,2.29163266603278,1.72617682470486,0.648540907100142,1.09824565275233,1.43768206527355,0,0.624075346229121,0.757736633841335,0.538192240565737,0,0,0,0.162964976442026,1.86719594352707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0.283880170416537,1.06839362200353,0.488660878060728,0,0,4.37005145078967,12.6975893925195,23.7642400492432,19.1946230372502,19.0609791725235,87.8656196771952,8.36127577798263,9.26893183800275,2.84433082142234,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,8.68285319835728,5.08396970073168,0,0,0,0,0,0.492422699235184,1068.2772662484,0,0.170870880797853,1.23832120777933,0.370389054739423,0,0,0,0,0,0,28.6401185404534,0.790839983952838,7.9294592179471,36.397799856947,19.2361232333311,50.2233896616208,17.262636337257,20.91132429851,15.4436005770577,428.247871756084,0,0,0,0,0,0.645799117388655,0.168956125490778,0.821500670520278,0.2604087696879,0.419437377702843,0.483168241652012,0.288030006257865,0.632022241256357,0.202725215290164,0,0.129920822977795,0,0,0.480781798079875,0.590758108698309,0.403865799792591,0.304827226619999,0.403304740547362,1.16949456887703,1.15454209968395,1.16876902181569,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.853668028770671,2.67417388775123,2.72497111416377,14.5236371675511,20.0022055021454,19.9854005521727,20.5388294138762,21.7319602116866,16.9831130926461,17.7308760902912,19.7583580761452,19.2075457214608,17.5752535004177,18.5754539600399,18.0779548473975,18.1334667235883,17.7196937345422,16.6334779751869,21.6007629002812,18.8124354528898,16.4520971063651,19.040380578835,19.4806417459734,19.6305890308689,16.2805895856768,20.2563677807139,19.1483800522665,23.0068331379673,17.0834426098811,18.3218337218548,10.6400071224119,16.2683683245264,15.8183421004536,0.499621155875892,24.7967504952133,28.1481080803271,1.53030665655075,0.441182838239031,0.463735671240843 | |||
|short_description=p1@Vil1 | |||
}} |
Revision as of 00:08, 6 August 2015
Short description: | p1@Vil1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Vil1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_NM_009509, uc007bmb.2_5end |
EntrezGene: | 22349 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.13e-09 | 9 |
epithelial cell of alimentary canal | 4.13e-09 | 9 |
brush border epithelial cell | 5.25e-07 | 6 |
gut absorptive cell | 5.25e-07 | 6 |
enterocyte | 5.25e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.79e-27 | 31 |
gastrointestinal system | 4.11e-26 | 47 |
mucosa | 9.09e-15 | 15 |
intestinal mucosa | 5.88e-13 | 13 |
wall of intestine | 5.88e-13 | 13 |
gastrointestinal system mucosa | 5.88e-13 | 13 |
organ component layer | 6.84e-11 | 24 |
epithelium of mucosa | 4.13e-09 | 9 |
gastrointestinal system epithelium | 4.13e-09 | 9 |
intestinal epithelium | 4.13e-09 | 9 |
endoderm-derived structure | 3.68e-07 | 118 |
endoderm | 3.68e-07 | 118 |
presumptive endoderm | 3.68e-07 | 118 |
simple columnar epithelium | 7.06e-07 | 11 |