FFCP PHASE1:Mm9::chr3:122215088..122215124,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=424|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:122215088..122215124,+|id=chr3:122215088..122215124,+|ontology_enrichment_celltype=CL:0002563!1.81e-10!9;CL:0002251!1.81e-10!9;CL:0000239!1.10e-07!6;CL:0000677!1.10e-07!6;CL:0000212!1.10e-07!6;CL:0000584!1.10e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,2.11e-19,9;CL:0002251,2.11e-19,9;CL:0000239,7.76e-14,6;CL:0000677,7.76e-14,6;CL:0000584,7.76e-14,6;CL:0000075,9.39e-12,7;CL:0000066,3.91e-11,25;CL:0002076,5.97e-11,15;CL:0000682,2.94e-08,3;CL:0000223,8.59e-08,20;CL:0002250,3.84e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.95e-31!43;UBERON:0005409!1.52e-29!59;UBERON:0000344!2.98e-17!15;UBERON:0001242!5.24e-15!13;UBERON:0000060!5.24e-15!13;UBERON:0001262!5.24e-15!13;UBERON:0004786!5.24e-15!13;UBERON:0004119!7.37e-14!130;UBERON:0000925!7.37e-14!130;UBERON:0006595!7.37e-14!130;UBERON:0004923!4.95e-13!24;UBERON:0001007!9.97e-13!128;UBERON:0001555!9.97e-13!128;UBERON:0007026!9.97e-13!128;UBERON:0004921!2.18e-11!126;UBERON:0004185!2.18e-11!126;UBERON:0003350!1.81e-10!9;UBERON:0004808!1.81e-10!9;UBERON:0001277!1.81e-10!9;UBERON:0000485!4.52e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.49e-42,31;UBERON:0005409,1.91e-38,47;UBERON:0000344,4.76e-33,15;UBERON:0001242,1.59e-28,13;UBERON:0001262,1.59e-28,13;UBERON:0004786,1.59e-28,13;UBERON:0004923,8.10e-22,24;UBERON:0003350,2.11e-19,9;UBERON:0004808,2.11e-19,9;UBERON:0001277,2.11e-19,9;UBERON:0000485,1.47e-15,11;UBERON:0001007,6.06e-15,116;UBERON:0001555,6.06e-15,116;UBERON:0007026,6.06e-15,116;UBERON:0004119,1.45e-14,118;UBERON:0000925,1.45e-14,118;UBERON:0006595,1.45e-14,118;UBERON:0004921,8.20e-13,114;UBERON:0002108,1.79e-10,4;UBERON:0000331,2.23e-08,3;UBERON:0002116,2.23e-08,3;UBERON:0001204,2.23e-08,3;UBERON:0001168,2.23e-08,3|phase1_expression=0,3.48975407639361,5.91499011206397,4.83942738090928,5.50985302940982,12.255186849568,7.70921713965235,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,7.67963629408352,10.0940083669555,6.89078356938024,15.5074318617267,9.48073423817912,18.0522248483555,5.79669298447841,17.9601713630797,0,0,0,4.91047753577167,3.32469290716985,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0.505524445014783,1.59857431606684,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,22.3670113461747,0,0,8.68553987709211,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.505445516867349,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,8.92130714056255,3.17340679996253,0.213288250535234,0.232236671860439,0.644337306610467,0.605050573870028,0.444756087689741,0.760902504450237,3.32170343081158,1.64698954724011,2.26201687920243,2.58643413653496,2.9244613067868,6.29173586057955,7.78096979548899,10.9527700289902,0,0.114248512609729,0,0,0,0,0.442655759869801,0.590440591918409,0.31399745568275,0.370191491765402,0.296452627087149,0,0,0,0.405720242777006,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13163047853539,0.885905678642318,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.63549621259146,0,0,0,0,0,0.164140899745061,7.57850175237612,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0,0,0.324016022465404,0,0.436725127492355,1.07891477107857,1.73572257023205,2.09404753587224,16.7203315546413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0.167884616364078,0.19318959403219,0.187682475451182,2.93042598827624,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.282328141245992,0,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0,0,0,0.385813221962283,0,0,0.214871054048298,0,0.220591419119515,0|short_description=p@chr3:122215088..122215124,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=424 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:122215088..122215124,+ | |||
|description=CAGE_peak_at_chr3:122215088..122215124,+ | |||
|id=chr3:122215088..122215124,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.81e-10!9;CL:0002251!1.81e-10!9;CL:0000239!1.10e-07!6;CL:0000677!1.10e-07!6;CL:0000212!1.10e-07!6;CL:0000584!1.10e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.11e-19,9;CL:0002251,2.11e-19,9;CL:0000239,7.76e-14,6;CL:0000677,7.76e-14,6;CL:0000584,7.76e-14,6;CL:0000075,9.39e-12,7;CL:0000066,3.91e-11,25;CL:0002076,5.97e-11,15;CL:0000682,2.94e-08,3;CL:0000223,8.59e-08,20;CL:0002250,3.84e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.95e-31!43;UBERON:0005409!1.52e-29!59;UBERON:0000344!2.98e-17!15;UBERON:0001242!5.24e-15!13;UBERON:0000060!5.24e-15!13;UBERON:0001262!5.24e-15!13;UBERON:0004786!5.24e-15!13;UBERON:0004119!7.37e-14!130;UBERON:0000925!7.37e-14!130;UBERON:0006595!7.37e-14!130;UBERON:0004923!4.95e-13!24;UBERON:0001007!9.97e-13!128;UBERON:0001555!9.97e-13!128;UBERON:0007026!9.97e-13!128;UBERON:0004921!2.18e-11!126;UBERON:0004185!2.18e-11!126;UBERON:0003350!1.81e-10!9;UBERON:0004808!1.81e-10!9;UBERON:0001277!1.81e-10!9;UBERON:0000485!4.52e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.49e-42,31;UBERON:0005409,1.91e-38,47;UBERON:0000344,4.76e-33,15;UBERON:0001242,1.59e-28,13;UBERON:0001262,1.59e-28,13;UBERON:0004786,1.59e-28,13;UBERON:0004923,8.10e-22,24;UBERON:0003350,2.11e-19,9;UBERON:0004808,2.11e-19,9;UBERON:0001277,2.11e-19,9;UBERON:0000485,1.47e-15,11;UBERON:0001007,6.06e-15,116;UBERON:0001555,6.06e-15,116;UBERON:0007026,6.06e-15,116;UBERON:0004119,1.45e-14,118;UBERON:0000925,1.45e-14,118;UBERON:0006595,1.45e-14,118;UBERON:0004921,8.20e-13,114;UBERON:0002108,1.79e-10,4;UBERON:0000331,2.23e-08,3;UBERON:0002116,2.23e-08,3;UBERON:0001204,2.23e-08,3;UBERON:0001168,2.23e-08,3 | |||
|phase1_expression=0,3.48975407639361,5.91499011206397,4.83942738090928,5.50985302940982,12.255186849568,7.70921713965235,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,7.67963629408352,10.0940083669555,6.89078356938024,15.5074318617267,9.48073423817912,18.0522248483555,5.79669298447841,17.9601713630797,0,0,0,4.91047753577167,3.32469290716985,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0.505524445014783,1.59857431606684,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,22.3670113461747,0,0,8.68553987709211,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.505445516867349,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,8.92130714056255,3.17340679996253,0.213288250535234,0.232236671860439,0.644337306610467,0.605050573870028,0.444756087689741,0.760902504450237,3.32170343081158,1.64698954724011,2.26201687920243,2.58643413653496,2.9244613067868,6.29173586057955,7.78096979548899,10.9527700289902,0,0.114248512609729,0,0,0,0,0.442655759869801,0.590440591918409,0.31399745568275,0.370191491765402,0.296452627087149,0,0,0,0.405720242777006,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13163047853539,0.885905678642318,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.63549621259146,0,0,0,0,0,0.164140899745061,7.57850175237612,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0,0,0.324016022465404,0,0.436725127492355,1.07891477107857,1.73572257023205,2.09404753587224,16.7203315546413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0.167884616364078,0.19318959403219,0.187682475451182,2.93042598827624,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.282328141245992,0,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0,0,0,0.385813221962283,0,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr3:122215088..122215124,+ | |||
}} |
Latest revision as of 23:22, 5 August 2015
Short description: | p@chr3:122215088..122215124, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:122215088..122215124, + |
Coexpression cluster: | MCL_coexpression_mm9:424 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.11e-19 | 9 |
epithelial cell of alimentary canal | 2.11e-19 | 9 |
brush border epithelial cell | 7.76e-14 | 6 |
gut absorptive cell | 7.76e-14 | 6 |
enterocyte | 7.76e-14 | 6 |
columnar/cuboidal epithelial cell | 9.39e-12 | 7 |
epithelial cell | 3.91e-11 | 25 |
endo-epithelial cell | 5.97e-11 | 15 |
M cell of gut | 2.94e-08 | 3 |
endodermal cell | 8.59e-08 | 20 |
intestinal crypt stem cell | 3.84e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.49e-42 | 31 |
gastrointestinal system | 1.91e-38 | 47 |
mucosa | 4.76e-33 | 15 |
intestinal mucosa | 1.59e-28 | 13 |
wall of intestine | 1.59e-28 | 13 |
gastrointestinal system mucosa | 1.59e-28 | 13 |
organ component layer | 8.10e-22 | 24 |
epithelium of mucosa | 2.11e-19 | 9 |
gastrointestinal system epithelium | 2.11e-19 | 9 |
intestinal epithelium | 2.11e-19 | 9 |
simple columnar epithelium | 1.47e-15 | 11 |
digestive system | 6.06e-15 | 116 |
digestive tract | 6.06e-15 | 116 |
primitive gut | 6.06e-15 | 116 |
endoderm-derived structure | 1.45e-14 | 118 |
endoderm | 1.45e-14 | 118 |
presumptive endoderm | 1.45e-14 | 118 |
subdivision of digestive tract | 8.20e-13 | 114 |
small intestine | 1.79e-10 | 4 |
ileal mucosa | 2.23e-08 | 3 |
ileum | 2.23e-08 | 3 |
mucosa of small intestine | 2.23e-08 | 3 |
wall of small intestine | 2.23e-08 | 3 |