FFCP PHASE1:Mm9::chr11:4136414..4136436,+: Difference between revisions
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{{FFCP|EntrezGene=18413|HGNC=|MCL_coexpression_id=36|UniProt=P53347|association_with_transcript=0bp_to_ENSMUST00000075221,ENSMUST00000131764_5end|description=CAGE_peak_2_at_Osm_5end|id=chr11:4136414..4136436,+|ontology_enrichment_celltype=CL:0000988!8.47e-17!32;CL:0002032!8.47e-17!32;CL:0000037!8.47e-17!32;CL:0000566!8.47e-17!32;CL:0000837!8.47e-17!32;CL:0002031!1.13e-12!25;CL:0002320!1.01e-11!46;CL:0000134!1.01e-11!46;CL:0000838!4.42e-10!12;CL:0000738!5.51e-10!17;CL:0002087!5.51e-10!17;CL:0000084!1.59e-09!11;CL:0000827!1.59e-09!11;CL:0000219!1.72e-09!54;CL:0000049!4.54e-09!19;CL:0000542!5.78e-09!13;CL:0000051!5.78e-09!13;CL:0000791!8.77e-09!9;CL:0000789!8.77e-09!9;CL:0002420!8.77e-09!9;CL:0002419!8.77e-09!9;CL:0000790!8.77e-09!9;CL:0000624!3.42e-08!8;CL:0000763!9.56e-07!16|ontology_enrichment_celltype_v019_2=CL:0000988,5.03e-29,32;CL:0002032,5.03e-29,32;CL:0000037,5.03e-29,32;CL:0000837,5.03e-29,32;CL:0002320,2.27e-24,46;CL:0000134,2.27e-24,46;CL:0000219,8.75e-20,54;CL:0002031,1.06e-19,25;CL:0000049,3.06e-18,19;CL:0000791,1.68e-17,9;CL:0000789,1.68e-17,9;CL:0002420,1.68e-17,9;CL:0002419,1.68e-17,9;CL:0000790,1.68e-17,9;CL:0000624,3.37e-16,8;CL:0000034,6.23e-15,97;CL:0000084,5.52e-14,11;CL:0000827,5.52e-14,11;CL:0000763,4.07e-13,16;CL:0000838,1.15e-12,12;CL:0000738,1.24e-12,17;CL:0002087,1.24e-12,17;CL:0000723,1.47e-12,91;CL:0000048,1.47e-12,91;CL:0000893,2.24e-12,6;CL:0002489,2.24e-12,6;CL:0000898,2.24e-12,6;CL:0000809,2.24e-12,6;CL:0000810,2.24e-12,6;CL:0000895,2.24e-12,6;CL:0000808,2.24e-12,6;CL:0000894,2.24e-12,6;CL:0000806,2.24e-12,6;CL:0000807,2.24e-12,6;CL:0000805,2.24e-12,6;CL:0002425,2.24e-12,6;CL:0002436,2.24e-12,6;CL:0002427,2.24e-12,6;CL:0002428,2.24e-12,6;CL:0002429,2.24e-12,6;CL:0002433,2.24e-12,6;CL:0002431,2.24e-12,6;CL:0002432,2.24e-12,6;CL:0000542,1.49e-11,13;CL:0000051,1.49e-11,13;CL:0000553,2.08e-11,6;CL:0000556,2.08e-11,6;CL:0000839,1.53e-08,13;CL:0000050,2.28e-07,9;CL:0000557,3.07e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.03e-07,3;DOID:4045,1.03e-07,3|ontology_enrichment_uberon=UBERON:0002193!8.05e-23!48;UBERON:0002390!2.02e-22!45;UBERON:0003061!2.02e-22!45;UBERON:0002405!4.28e-16!70;UBERON:0003081!1.87e-12!88;UBERON:0001474!5.23e-12!22;UBERON:0004765!5.23e-12!22;UBERON:0001434!5.23e-12!22;UBERON:0004177!8.38e-12!29;UBERON:0002384!1.01e-11!46;UBERON:0002371!1.29e-11!16;UBERON:0002204!1.33e-09!32;UBERON:0002370!2.02e-09!23;UBERON:0000974!2.02e-09!23;UBERON:0004807!2.02e-09!23;UBERON:0005058!2.02e-09!23;UBERON:0003351!2.02e-09!23;UBERON:0009113!2.02e-09!23;UBERON:0003295!2.02e-09!23;UBERON:0009722!2.02e-09!23;UBERON:0005562!2.02e-09!23;UBERON:0007690!2.02e-09!23;UBERON:0006562!9.32e-09!24;UBERON:0003408!9.32e-09!24;UBERON:0001557!9.32e-09!24;UBERON:0001042!9.32e-09!24;UBERON:0008814!9.32e-09!24;UBERON:0009145!9.32e-09!24;UBERON:0000072!4.30e-07!27;UBERON:0005057!5.25e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.27e-24,46;UBERON:0002193,5.47e-24,48;UBERON:0002405,5.47e-24,48;UBERON:0002390,6.25e-24,45;UBERON:0003061,6.25e-24,45;UBERON:0002371,9.02e-22,16;UBERON:0001474,2.82e-17,22;UBERON:0004765,2.82e-17,22;UBERON:0001434,2.82e-17,22;UBERON:0002204,9.50e-17,32;UBERON:0003081,2.51e-10,87;UBERON:0000926,3.18e-08,120;UBERON:0004120,3.18e-08,120;UBERON:0006603,3.18e-08,120;UBERON:0004177,2.80e-07,29;UBERON:0005057,2.80e-07,29|phase1_expression=0,0,0,0,0,0,0,9.8133725815598,2.53419699873,1.87251621057595,2.22583358693156,3.03134204182278,9.75844160607873,11.3646523144697,1.33243904726265,1.21485160433896,3.49780939064073,3.15462165358238,2.60517423850904,2.54633791078818,0,0.198581902401771,0.783599367416806,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95210098400125,6.2506827561904,8.89990364755457,12.9410927366823,10.9287277593351,12.1377588257788,0,0,0,0,0,0,0,0,0,0.671130424230945,2.90144856804538,1.00828139742739,0,0,0,0,0,0,0,0,4.04954872776629,2.96659908770092,1.4209602298922,1.19840044207362,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0,0.884610551949874,0.323533699894818,0.662524555381181,2.42437626567611,0,0,0,0,4.55297473122497,4.19931911695385,3.04968544975355,0,0,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0.622034853050465,0,0,0,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,6.31991868581911,3.86021860672073,1.70498099637356,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0.575392274901621,0,1.09824565275233,1.43768206527355,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0,0.390267295715598,0,0,0.159454768657487,0.163863314715738,0.345369963731791,0.289298117163023,4.52373851817817,0.54390568381871,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,1.36696704638282,0,0.555583582109135,0.753473828018764,1.91371918809435,2.0590035588587,3.22959016988325,4.19854356970974,4.14599921413271,0,0,0,0,0,0,0.404593039154462,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,1.58005560314089,0.202725215290164,0.308132871494482,0.649604114888975,0,0.596044064343795,0.600977247599844,0.443068581523732,0.605798699688886,0.381034033274999,0.302478555410522,1.16949456887703,1.15454209968395,0.818138315270983,0,0,0,0,0.19318959403219,0.187682475451182,0,0.428736758158132,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.64183841918363,0,0,0,0,0,0.229741875822453,0,0,0.192909220463705,0,0,0,0.354951612318675,0.238436189947321,0.436039249896986,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0.231867835620421|short_description=p2@Osm}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18413 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P53347 | |||
|association_with_transcript=0bp_to_ENSMUST00000075221,ENSMUST00000131764_5end | |||
|cluster_id=chr11:4136414..4136436,+ | |||
|description=CAGE_peak_2_at_Osm_5end | |||
|id=chr11:4136414..4136436,+ | |||
|ontology_enrichment_celltype=CL:0000988!8.47e-17!32;CL:0002032!8.47e-17!32;CL:0000037!8.47e-17!32;CL:0000566!8.47e-17!32;CL:0000837!8.47e-17!32;CL:0002031!1.13e-12!25;CL:0002320!1.01e-11!46;CL:0000134!1.01e-11!46;CL:0000838!4.42e-10!12;CL:0000738!5.51e-10!17;CL:0002087!5.51e-10!17;CL:0000084!1.59e-09!11;CL:0000827!1.59e-09!11;CL:0000219!1.72e-09!54;CL:0000049!4.54e-09!19;CL:0000542!5.78e-09!13;CL:0000051!5.78e-09!13;CL:0000791!8.77e-09!9;CL:0000789!8.77e-09!9;CL:0002420!8.77e-09!9;CL:0002419!8.77e-09!9;CL:0000790!8.77e-09!9;CL:0000624!3.42e-08!8;CL:0000763!9.56e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.03e-29,32;CL:0002032,5.03e-29,32;CL:0000037,5.03e-29,32;CL:0000837,5.03e-29,32;CL:0002320,2.27e-24,46;CL:0000134,2.27e-24,46;CL:0000219,8.75e-20,54;CL:0002031,1.06e-19,25;CL:0000049,3.06e-18,19;CL:0000791,1.68e-17,9;CL:0000789,1.68e-17,9;CL:0002420,1.68e-17,9;CL:0002419,1.68e-17,9;CL:0000790,1.68e-17,9;CL:0000624,3.37e-16,8;CL:0000034,6.23e-15,97;CL:0000084,5.52e-14,11;CL:0000827,5.52e-14,11;CL:0000763,4.07e-13,16;CL:0000838,1.15e-12,12;CL:0000738,1.24e-12,17;CL:0002087,1.24e-12,17;CL:0000723,1.47e-12,91;CL:0000048,1.47e-12,91;CL:0000893,2.24e-12,6;CL:0002489,2.24e-12,6;CL:0000898,2.24e-12,6;CL:0000809,2.24e-12,6;CL:0000810,2.24e-12,6;CL:0000895,2.24e-12,6;CL:0000808,2.24e-12,6;CL:0000894,2.24e-12,6;CL:0000806,2.24e-12,6;CL:0000807,2.24e-12,6;CL:0000805,2.24e-12,6;CL:0002425,2.24e-12,6;CL:0002436,2.24e-12,6;CL:0002427,2.24e-12,6;CL:0002428,2.24e-12,6;CL:0002429,2.24e-12,6;CL:0002433,2.24e-12,6;CL:0002431,2.24e-12,6;CL:0002432,2.24e-12,6;CL:0000542,1.49e-11,13;CL:0000051,1.49e-11,13;CL:0000553,2.08e-11,6;CL:0000556,2.08e-11,6;CL:0000839,1.53e-08,13;CL:0000050,2.28e-07,9;CL:0000557,3.07e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.03e-07,3;DOID:4045,1.03e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!8.05e-23!48;UBERON:0002390!2.02e-22!45;UBERON:0003061!2.02e-22!45;UBERON:0002405!4.28e-16!70;UBERON:0003081!1.87e-12!88;UBERON:0001474!5.23e-12!22;UBERON:0004765!5.23e-12!22;UBERON:0001434!5.23e-12!22;UBERON:0004177!8.38e-12!29;UBERON:0002384!1.01e-11!46;UBERON:0002371!1.29e-11!16;UBERON:0002204!1.33e-09!32;UBERON:0002370!2.02e-09!23;UBERON:0000974!2.02e-09!23;UBERON:0004807!2.02e-09!23;UBERON:0005058!2.02e-09!23;UBERON:0003351!2.02e-09!23;UBERON:0009113!2.02e-09!23;UBERON:0003295!2.02e-09!23;UBERON:0009722!2.02e-09!23;UBERON:0005562!2.02e-09!23;UBERON:0007690!2.02e-09!23;UBERON:0006562!9.32e-09!24;UBERON:0003408!9.32e-09!24;UBERON:0001557!9.32e-09!24;UBERON:0001042!9.32e-09!24;UBERON:0008814!9.32e-09!24;UBERON:0009145!9.32e-09!24;UBERON:0000072!4.30e-07!27;UBERON:0005057!5.25e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.27e-24,46;UBERON:0002193,5.47e-24,48;UBERON:0002405,5.47e-24,48;UBERON:0002390,6.25e-24,45;UBERON:0003061,6.25e-24,45;UBERON:0002371,9.02e-22,16;UBERON:0001474,2.82e-17,22;UBERON:0004765,2.82e-17,22;UBERON:0001434,2.82e-17,22;UBERON:0002204,9.50e-17,32;UBERON:0003081,2.51e-10,87;UBERON:0000926,3.18e-08,120;UBERON:0004120,3.18e-08,120;UBERON:0006603,3.18e-08,120;UBERON:0004177,2.80e-07,29;UBERON:0005057,2.80e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,9.8133725815598,2.53419699873,1.87251621057595,2.22583358693156,3.03134204182278,9.75844160607873,11.3646523144697,1.33243904726265,1.21485160433896,3.49780939064073,3.15462165358238,2.60517423850904,2.54633791078818,0,0.198581902401771,0.783599367416806,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95210098400125,6.2506827561904,8.89990364755457,12.9410927366823,10.9287277593351,12.1377588257788,0,0,0,0,0,0,0,0,0,0.671130424230945,2.90144856804538,1.00828139742739,0,0,0,0,0,0,0,0,4.04954872776629,2.96659908770092,1.4209602298922,1.19840044207362,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0,0.884610551949874,0.323533699894818,0.662524555381181,2.42437626567611,0,0,0,0,4.55297473122497,4.19931911695385,3.04968544975355,0,0,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0.622034853050465,0,0,0,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,6.31991868581911,3.86021860672073,1.70498099637356,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0.575392274901621,0,1.09824565275233,1.43768206527355,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0,0.390267295715598,0,0,0.159454768657487,0.163863314715738,0.345369963731791,0.289298117163023,4.52373851817817,0.54390568381871,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,1.36696704638282,0,0.555583582109135,0.753473828018764,1.91371918809435,2.0590035588587,3.22959016988325,4.19854356970974,4.14599921413271,0,0,0,0,0,0,0.404593039154462,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,1.58005560314089,0.202725215290164,0.308132871494482,0.649604114888975,0,0.596044064343795,0.600977247599844,0.443068581523732,0.605798699688886,0.381034033274999,0.302478555410522,1.16949456887703,1.15454209968395,0.818138315270983,0,0,0,0,0.19318959403219,0.187682475451182,0,0.428736758158132,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.64183841918363,0,0,0,0,0,0.229741875822453,0,0,0.192909220463705,0,0,0,0.354951612318675,0.238436189947321,0.436039249896986,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0.231867835620421 | |||
|short_description=p2@Osm | |||
}} |
Revision as of 21:45, 5 August 2015
Short description: | p2@Osm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Osm_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000075221, ENSMUST00000131764_5end |
EntrezGene: | 18413 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.27e-24 | 46 |
hemolymphoid system | 5.47e-24 | 48 |
immune system | 5.47e-24 | 48 |
hematopoietic system | 6.25e-24 | 45 |
blood island | 6.25e-24 | 45 |
bone marrow | 9.02e-22 | 16 |
bone element | 2.82e-17 | 22 |
skeletal element | 2.82e-17 | 22 |
skeletal system | 2.82e-17 | 22 |
musculoskeletal system | 9.50e-17 | 32 |
lateral plate mesoderm | 2.51e-10 | 87 |
mesoderm | 3.18e-08 | 120 |
mesoderm-derived structure | 3.18e-08 | 120 |
presumptive mesoderm | 3.18e-08 | 120 |
hemopoietic organ | 2.80e-07 | 29 |
immune organ | 2.80e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.03e-07 | 3 |
muscle cancer | 1.03e-07 | 3 |