FFCP PHASE1:Mm9::chr18:56547114..56547143,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=74|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:56547114..56547143,+|id=chr18:56547114..56547143,+|ontology_enrichment_celltype=CL:0002563!1.28e-11!9;CL:0002251!1.28e-11!9;CL:0000239!2.04e-08!6;CL:0000677!2.04e-08!6;CL:0000212!2.04e-08!6;CL:0000584!2.04e-08!6;CL:0000075!4.66e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,4.65e-09,6;CL:0000677,4.65e-09,6;CL:0000584,4.65e-09,6;CL:0002563,6.95e-09,9;CL:0002251,6.95e-09,9;CL:0000075,8.94e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.31e-19!43;UBERON:0000344!2.89e-16!15;UBERON:0001242!8.73e-14!13;UBERON:0000060!8.73e-14!13;UBERON:0001262!8.73e-14!13;UBERON:0004786!8.73e-14!13;UBERON:0005409!1.25e-13!59;UBERON:0003350!1.28e-11!9;UBERON:0004808!1.28e-11!9;UBERON:0001277!1.28e-11!9;UBERON:0000485!4.28e-09!11;UBERON:0004923!1.25e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.28e-36,31;UBERON:0005409,5.73e-25,47;UBERON:0000344,5.08e-13,15;UBERON:0001007,3.18e-11,116;UBERON:0001555,3.18e-11,116;UBERON:0007026,3.18e-11,116;UBERON:0004119,5.84e-11,118;UBERON:0000925,5.84e-11,118;UBERON:0006595,5.84e-11,118;UBERON:0004921,3.91e-09,114;UBERON:0003350,6.95e-09,9;UBERON:0004808,6.95e-09,9;UBERON:0001277,6.95e-09,9;UBERON:0001242,9.51e-09,13;UBERON:0001262,9.51e-09,13;UBERON:0004786,9.51e-09,13;UBERON:0010147,3.29e-08,2;UBERON:0003937,3.29e-08,2;UBERON:0005399,3.29e-08,2;UBERON:0004923,1.07e-07,24;UBERON:0001962,2.11e-07,2;UBERON:0001961,2.11e-07,2;UBERON:0001744,2.11e-07,2;UBERON:0000485,3.19e-07,11|phase1_expression=0,1.39590163055744,1.36499771816861,15.1232105653415,14.5259761684441,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11975752938901,1.60586496747019,1.72269589234506,0,0.861884930743556,0.950117097281869,0.756090389279792,0,0,0,0,0.577703239502549,0.831173226792462,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15279754584056,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.2061677114401,9.52022039988759,0,0,0,1.00841762311671,0.889512175379481,1.52180500890047,18.0321043386914,1.64698954724011,11.0587491872119,11.5394753783867,7.79856348476481,18.8752075817387,22.0460810872188,14.7364542208232,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.327726629431476,0,0.433947175744535,0,0,0,0,0.481651769963376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8170669899359,0.98931751764888,0,0,0.238744688006273,0.492422699235184,16.3229268512716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,1.03691978633434,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0,13.5424468089548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr18:56547114..56547143,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:56547114..56547143,+ | |||
|description=CAGE_peak_at_chr18:56547114..56547143,+ | |||
|id=chr18:56547114..56547143,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.28e-11!9;CL:0002251!1.28e-11!9;CL:0000239!2.04e-08!6;CL:0000677!2.04e-08!6;CL:0000212!2.04e-08!6;CL:0000584!2.04e-08!6;CL:0000075!4.66e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.65e-09,6;CL:0000677,4.65e-09,6;CL:0000584,4.65e-09,6;CL:0002563,6.95e-09,9;CL:0002251,6.95e-09,9;CL:0000075,8.94e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.31e-19!43;UBERON:0000344!2.89e-16!15;UBERON:0001242!8.73e-14!13;UBERON:0000060!8.73e-14!13;UBERON:0001262!8.73e-14!13;UBERON:0004786!8.73e-14!13;UBERON:0005409!1.25e-13!59;UBERON:0003350!1.28e-11!9;UBERON:0004808!1.28e-11!9;UBERON:0001277!1.28e-11!9;UBERON:0000485!4.28e-09!11;UBERON:0004923!1.25e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.28e-36,31;UBERON:0005409,5.73e-25,47;UBERON:0000344,5.08e-13,15;UBERON:0001007,3.18e-11,116;UBERON:0001555,3.18e-11,116;UBERON:0007026,3.18e-11,116;UBERON:0004119,5.84e-11,118;UBERON:0000925,5.84e-11,118;UBERON:0006595,5.84e-11,118;UBERON:0004921,3.91e-09,114;UBERON:0003350,6.95e-09,9;UBERON:0004808,6.95e-09,9;UBERON:0001277,6.95e-09,9;UBERON:0001242,9.51e-09,13;UBERON:0001262,9.51e-09,13;UBERON:0004786,9.51e-09,13;UBERON:0010147,3.29e-08,2;UBERON:0003937,3.29e-08,2;UBERON:0005399,3.29e-08,2;UBERON:0004923,1.07e-07,24;UBERON:0001962,2.11e-07,2;UBERON:0001961,2.11e-07,2;UBERON:0001744,2.11e-07,2;UBERON:0000485,3.19e-07,11 | |||
|phase1_expression=0,1.39590163055744,1.36499771816861,15.1232105653415,14.5259761684441,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11975752938901,1.60586496747019,1.72269589234506,0,0.861884930743556,0.950117097281869,0.756090389279792,0,0,0,0,0.577703239502549,0.831173226792462,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15279754584056,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.2061677114401,9.52022039988759,0,0,0,1.00841762311671,0.889512175379481,1.52180500890047,18.0321043386914,1.64698954724011,11.0587491872119,11.5394753783867,7.79856348476481,18.8752075817387,22.0460810872188,14.7364542208232,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.327726629431476,0,0.433947175744535,0,0,0,0,0.481651769963376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8170669899359,0.98931751764888,0,0,0.238744688006273,0.492422699235184,16.3229268512716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,1.03691978633434,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0,13.5424468089548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr18:56547114..56547143,+ | |||
}} |
Latest revision as of 21:34, 5 August 2015
Short description: | p@chr18:56547114..56547143, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:56547114..56547143, + |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.65e-09 | 6 |
gut absorptive cell | 4.65e-09 | 6 |
enterocyte | 4.65e-09 | 6 |
intestinal epithelial cell | 6.95e-09 | 9 |
epithelial cell of alimentary canal | 6.95e-09 | 9 |
columnar/cuboidal epithelial cell | 8.94e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.28e-36 | 31 |
gastrointestinal system | 5.73e-25 | 47 |
mucosa | 5.08e-13 | 15 |
digestive system | 3.18e-11 | 116 |
digestive tract | 3.18e-11 | 116 |
primitive gut | 3.18e-11 | 116 |
endoderm-derived structure | 5.84e-11 | 118 |
endoderm | 5.84e-11 | 118 |
presumptive endoderm | 5.84e-11 | 118 |
subdivision of digestive tract | 3.91e-09 | 114 |
epithelium of mucosa | 6.95e-09 | 9 |
gastrointestinal system epithelium | 6.95e-09 | 9 |
intestinal epithelium | 6.95e-09 | 9 |
intestinal mucosa | 9.51e-09 | 13 |
wall of intestine | 9.51e-09 | 13 |
gastrointestinal system mucosa | 9.51e-09 | 13 |
male accessory sex gland | 3.29e-08 | 2 |
sex gland | 3.29e-08 | 2 |
male reproductive gland | 3.29e-08 | 2 |
organ component layer | 1.07e-07 | 24 |
gut-associated lymphoid tissue | 2.11e-07 | 2 |
mucosa-associated lymphoid tissue | 2.11e-07 | 2 |
lymphoid tissue | 2.11e-07 | 2 |
simple columnar epithelium | 3.19e-07 | 11 |