FFCP PHASE1:Mm9::chr8:108582687..108582734,+: Difference between revisions
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{{FFCP|EntrezGene=18021|HGNC=|MCL_coexpression_id=868|UniProt=B5B2U1,B5B2U3,B5B2U2|association_with_transcript=-5bp_to_ENSMUST00000093190,uc009nfe.2,uc012gjs.1,uc012gjt.1_5end|description=CAGE_peak_4_at_Nfatc3_5end|id=chr8:108582687..108582734,+|ontology_enrichment_celltype=CL:0000988!5.35e-14!32;CL:0002032!5.35e-14!32;CL:0000037!5.35e-14!32;CL:0000566!5.35e-14!32;CL:0000837!5.35e-14!32;CL:0000838!5.95e-12!12;CL:0000084!7.19e-11!11;CL:0000827!7.19e-11!11;CL:0000542!1.06e-10!13;CL:0000051!1.06e-10!13;CL:0000791!3.12e-10!9;CL:0000789!3.12e-10!9;CL:0002420!3.12e-10!9;CL:0002419!3.12e-10!9;CL:0000790!3.12e-10!9;CL:0002031!3.32e-10!25;CL:0002320!1.03e-09!46;CL:0000134!1.03e-09!46;CL:0000624!3.51e-09!8;CL:0000738!1.46e-08!17;CL:0002087!1.46e-08!17;CL:0000219!3.30e-08!54;CL:0000893!4.31e-07!6;CL:0002489!4.31e-07!6;CL:0000898!4.31e-07!6;CL:0000809!4.31e-07!6;CL:0000810!4.31e-07!6;CL:0000895!4.31e-07!6;CL:0000808!4.31e-07!6;CL:0000894!4.31e-07!6;CL:0000806!4.31e-07!6;CL:0000807!4.31e-07!6;CL:0000805!4.31e-07!6;CL:0002425!4.31e-07!6;CL:0002436!4.31e-07!6;CL:0002427!4.31e-07!6;CL:0002428!4.31e-07!6;CL:0002429!4.31e-07!6;CL:0002433!4.31e-07!6;CL:0002431!4.31e-07!6;CL:0002432!4.31e-07!6|ontology_enrichment_celltype_v019_2=CL:0000791,1.01e-20,9;CL:0000789,1.01e-20,9;CL:0002420,1.01e-20,9;CL:0002419,1.01e-20,9;CL:0000790,1.01e-20,9;CL:0000988,6.24e-20,32;CL:0002032,6.24e-20,32;CL:0000037,6.24e-20,32;CL:0000837,6.24e-20,32;CL:0000838,6.59e-19,12;CL:0000624,2.15e-18,8;CL:0000542,2.77e-17,13;CL:0000051,2.77e-17,13;CL:0000084,1.28e-16,11;CL:0000827,1.28e-16,11;CL:0002320,4.92e-14,46;CL:0000134,4.92e-14,46;CL:0002031,8.35e-14,25;CL:0000893,8.61e-14,6;CL:0002489,8.61e-14,6;CL:0000898,8.61e-14,6;CL:0000809,8.61e-14,6;CL:0000810,8.61e-14,6;CL:0000895,8.61e-14,6;CL:0000808,8.61e-14,6;CL:0000894,8.61e-14,6;CL:0000806,8.61e-14,6;CL:0000807,8.61e-14,6;CL:0000805,8.61e-14,6;CL:0002425,8.61e-14,6;CL:0002436,8.61e-14,6;CL:0002427,8.61e-14,6;CL:0002428,8.61e-14,6;CL:0002429,8.61e-14,6;CL:0002433,8.61e-14,6;CL:0002431,8.61e-14,6;CL:0002432,8.61e-14,6;CL:0000738,1.05e-12,17;CL:0002087,1.05e-12,17;CL:0000219,2.78e-11,54;CL:0000034,2.18e-09,97;CL:0000723,2.27e-07,91;CL:0000048,2.27e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.31e-07,3;DOID:4045,1.31e-07,3|ontology_enrichment_uberon=UBERON:0002193!1.80e-18!48;UBERON:0002390!7.58e-18!45;UBERON:0003061!7.58e-18!45;UBERON:0004177!3.58e-16!29;UBERON:0002370!4.40e-16!23;UBERON:0000974!4.40e-16!23;UBERON:0004807!4.40e-16!23;UBERON:0005058!4.40e-16!23;UBERON:0003351!4.40e-16!23;UBERON:0009113!4.40e-16!23;UBERON:0003295!4.40e-16!23;UBERON:0009722!4.40e-16!23;UBERON:0005562!4.40e-16!23;UBERON:0007690!4.40e-16!23;UBERON:0006562!4.39e-15!24;UBERON:0003408!4.39e-15!24;UBERON:0001557!4.39e-15!24;UBERON:0001042!4.39e-15!24;UBERON:0008814!4.39e-15!24;UBERON:0009145!4.39e-15!24;UBERON:0000072!6.77e-14!27;UBERON:0002405!2.12e-10!70;UBERON:0002384!1.03e-09!46;UBERON:0000065!1.28e-09!41;UBERON:0001004!3.40e-09!42;UBERON:0003081!3.60e-09!88;UBERON:0000063!5.62e-09!35;UBERON:0005057!4.38e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.33e-21,23;UBERON:0000974,1.33e-21,23;UBERON:0004807,1.33e-21,23;UBERON:0005058,1.33e-21,23;UBERON:0003351,1.33e-21,23;UBERON:0009113,1.33e-21,23;UBERON:0003295,1.33e-21,23;UBERON:0009722,1.33e-21,23;UBERON:0005562,1.33e-21,23;UBERON:0007690,1.33e-21,23;UBERON:0006562,1.52e-20,24;UBERON:0003408,1.52e-20,24;UBERON:0001557,1.52e-20,24;UBERON:0001042,1.52e-20,24;UBERON:0008814,1.52e-20,24;UBERON:0009145,1.52e-20,24;UBERON:0000072,7.68e-18,27;UBERON:0002193,1.49e-17,48;UBERON:0002405,1.49e-17,48;UBERON:0002390,2.68e-17,45;UBERON:0003061,2.68e-17,45;UBERON:0004177,2.37e-16,29;UBERON:0005057,2.37e-16,29;UBERON:0000077,1.22e-14,35;UBERON:0002384,4.92e-14,46;UBERON:0007811,1.90e-12,36;UBERON:0000065,1.74e-10,41;UBERON:0001004,3.78e-10,42;UBERON:0000153,7.89e-10,43;UBERON:0000490,4.79e-09,66;UBERON:0003929,6.46e-08,55;UBERON:0003081,1.97e-07,87;UBERON:0002368,5.97e-07,60;UBERON:0000926,9.28e-07,120;UBERON:0004120,9.28e-07,120;UBERON:0006603,9.28e-07,120|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,2.67498572088167,3.04283884218592,1.54096171402954,1.03703806693937,4.45121897821135,4.80812213304486,0.666219523631325,0.404950534779652,0,2.5236973228659,2.05671650408608,3.81950686618227,0.0850432901510698,0.0992909512008853,0.261199789138935,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,2.3440060335714,1.57057123192139,11.1763982725893,8.19654581950135,3.39857247121808,0.125896817975577,0.101376931219515,0,0,0,0,0.194429899074283,0,0,9.56360854529097,10.8804321301702,4.7053131879945,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.280888840263504,0.170430322578058,0.259786004602869,0,0,0,2.54805239706646,0,0,0.253359865475099,0,0,1.03575153458869,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,2.27648736561249,2.39961092397363,1.27070227073065,0.149790639404823,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,1.40442637462647,1.28673953557358,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0.380451252225118,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0,0,0.54390568381871,0,0,0,0,0.163934945376675,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.683483523191411,0,0,0.188368457004691,0.136694227721025,0.228778173206523,2.37969801991397,3.77868921273877,2.07299960706636,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,1.12738587736838,0,0,0.194451188344048,0.129159823477731,0,0,0,0.104859344425711,0.241584120826006,0.576060012515731,2.21207784439725,0.202725215290164,0.102710957164827,0.77952493786677,0.716106782669926,1.39076948346885,0.841368146639782,1.18151621739662,2.22126189885925,1.21930890648,1.51239277705261,1.8516997340553,2.11666051608725,3.03879945672079,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.207574695168353,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p4@Nfatc3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18021 | |||
|HGNC= | |||
|MCL_coexpression_id=868 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B5B2U1,uniprot:B5B2U3,uniprot:B5B2U2 | |||
|association_with_transcript=-5bp_to_ENSMUST00000093190,uc009nfe.2,uc012gjs.1,uc012gjt.1_5end | |||
|cluster_id=chr8:108582687..108582734,+ | |||
|description=CAGE_peak_4_at_Nfatc3_5end | |||
|id=chr8:108582687..108582734,+ | |||
|ontology_enrichment_celltype=CL:0000988!5.35e-14!32;CL:0002032!5.35e-14!32;CL:0000037!5.35e-14!32;CL:0000566!5.35e-14!32;CL:0000837!5.35e-14!32;CL:0000838!5.95e-12!12;CL:0000084!7.19e-11!11;CL:0000827!7.19e-11!11;CL:0000542!1.06e-10!13;CL:0000051!1.06e-10!13;CL:0000791!3.12e-10!9;CL:0000789!3.12e-10!9;CL:0002420!3.12e-10!9;CL:0002419!3.12e-10!9;CL:0000790!3.12e-10!9;CL:0002031!3.32e-10!25;CL:0002320!1.03e-09!46;CL:0000134!1.03e-09!46;CL:0000624!3.51e-09!8;CL:0000738!1.46e-08!17;CL:0002087!1.46e-08!17;CL:0000219!3.30e-08!54;CL:0000893!4.31e-07!6;CL:0002489!4.31e-07!6;CL:0000898!4.31e-07!6;CL:0000809!4.31e-07!6;CL:0000810!4.31e-07!6;CL:0000895!4.31e-07!6;CL:0000808!4.31e-07!6;CL:0000894!4.31e-07!6;CL:0000806!4.31e-07!6;CL:0000807!4.31e-07!6;CL:0000805!4.31e-07!6;CL:0002425!4.31e-07!6;CL:0002436!4.31e-07!6;CL:0002427!4.31e-07!6;CL:0002428!4.31e-07!6;CL:0002429!4.31e-07!6;CL:0002433!4.31e-07!6;CL:0002431!4.31e-07!6;CL:0002432!4.31e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.01e-20,9;CL:0000789,1.01e-20,9;CL:0002420,1.01e-20,9;CL:0002419,1.01e-20,9;CL:0000790,1.01e-20,9;CL:0000988,6.24e-20,32;CL:0002032,6.24e-20,32;CL:0000037,6.24e-20,32;CL:0000837,6.24e-20,32;CL:0000838,6.59e-19,12;CL:0000624,2.15e-18,8;CL:0000542,2.77e-17,13;CL:0000051,2.77e-17,13;CL:0000084,1.28e-16,11;CL:0000827,1.28e-16,11;CL:0002320,4.92e-14,46;CL:0000134,4.92e-14,46;CL:0002031,8.35e-14,25;CL:0000893,8.61e-14,6;CL:0002489,8.61e-14,6;CL:0000898,8.61e-14,6;CL:0000809,8.61e-14,6;CL:0000810,8.61e-14,6;CL:0000895,8.61e-14,6;CL:0000808,8.61e-14,6;CL:0000894,8.61e-14,6;CL:0000806,8.61e-14,6;CL:0000807,8.61e-14,6;CL:0000805,8.61e-14,6;CL:0002425,8.61e-14,6;CL:0002436,8.61e-14,6;CL:0002427,8.61e-14,6;CL:0002428,8.61e-14,6;CL:0002429,8.61e-14,6;CL:0002433,8.61e-14,6;CL:0002431,8.61e-14,6;CL:0002432,8.61e-14,6;CL:0000738,1.05e-12,17;CL:0002087,1.05e-12,17;CL:0000219,2.78e-11,54;CL:0000034,2.18e-09,97;CL:0000723,2.27e-07,91;CL:0000048,2.27e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.31e-07,3;DOID:4045,1.31e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.80e-18!48;UBERON:0002390!7.58e-18!45;UBERON:0003061!7.58e-18!45;UBERON:0004177!3.58e-16!29;UBERON:0002370!4.40e-16!23;UBERON:0000974!4.40e-16!23;UBERON:0004807!4.40e-16!23;UBERON:0005058!4.40e-16!23;UBERON:0003351!4.40e-16!23;UBERON:0009113!4.40e-16!23;UBERON:0003295!4.40e-16!23;UBERON:0009722!4.40e-16!23;UBERON:0005562!4.40e-16!23;UBERON:0007690!4.40e-16!23;UBERON:0006562!4.39e-15!24;UBERON:0003408!4.39e-15!24;UBERON:0001557!4.39e-15!24;UBERON:0001042!4.39e-15!24;UBERON:0008814!4.39e-15!24;UBERON:0009145!4.39e-15!24;UBERON:0000072!6.77e-14!27;UBERON:0002405!2.12e-10!70;UBERON:0002384!1.03e-09!46;UBERON:0000065!1.28e-09!41;UBERON:0001004!3.40e-09!42;UBERON:0003081!3.60e-09!88;UBERON:0000063!5.62e-09!35;UBERON:0005057!4.38e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.33e-21,23;UBERON:0000974,1.33e-21,23;UBERON:0004807,1.33e-21,23;UBERON:0005058,1.33e-21,23;UBERON:0003351,1.33e-21,23;UBERON:0009113,1.33e-21,23;UBERON:0003295,1.33e-21,23;UBERON:0009722,1.33e-21,23;UBERON:0005562,1.33e-21,23;UBERON:0007690,1.33e-21,23;UBERON:0006562,1.52e-20,24;UBERON:0003408,1.52e-20,24;UBERON:0001557,1.52e-20,24;UBERON:0001042,1.52e-20,24;UBERON:0008814,1.52e-20,24;UBERON:0009145,1.52e-20,24;UBERON:0000072,7.68e-18,27;UBERON:0002193,1.49e-17,48;UBERON:0002405,1.49e-17,48;UBERON:0002390,2.68e-17,45;UBERON:0003061,2.68e-17,45;UBERON:0004177,2.37e-16,29;UBERON:0005057,2.37e-16,29;UBERON:0000077,1.22e-14,35;UBERON:0002384,4.92e-14,46;UBERON:0007811,1.90e-12,36;UBERON:0000065,1.74e-10,41;UBERON:0001004,3.78e-10,42;UBERON:0000153,7.89e-10,43;UBERON:0000490,4.79e-09,66;UBERON:0003929,6.46e-08,55;UBERON:0003081,1.97e-07,87;UBERON:0002368,5.97e-07,60;UBERON:0000926,9.28e-07,120;UBERON:0004120,9.28e-07,120;UBERON:0006603,9.28e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,2.67498572088167,3.04283884218592,1.54096171402954,1.03703806693937,4.45121897821135,4.80812213304486,0.666219523631325,0.404950534779652,0,2.5236973228659,2.05671650408608,3.81950686618227,0.0850432901510698,0.0992909512008853,0.261199789138935,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,2.3440060335714,1.57057123192139,11.1763982725893,8.19654581950135,3.39857247121808,0.125896817975577,0.101376931219515,0,0,0,0,0.194429899074283,0,0,9.56360854529097,10.8804321301702,4.7053131879945,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.280888840263504,0.170430322578058,0.259786004602869,0,0,0,2.54805239706646,0,0,0.253359865475099,0,0,1.03575153458869,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,2.27648736561249,2.39961092397363,1.27070227073065,0.149790639404823,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,1.40442637462647,1.28673953557358,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0.380451252225118,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0,0,0.54390568381871,0,0,0,0,0.163934945376675,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.683483523191411,0,0,0.188368457004691,0.136694227721025,0.228778173206523,2.37969801991397,3.77868921273877,2.07299960706636,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,1.12738587736838,0,0,0.194451188344048,0.129159823477731,0,0,0,0.104859344425711,0.241584120826006,0.576060012515731,2.21207784439725,0.202725215290164,0.102710957164827,0.77952493786677,0.716106782669926,1.39076948346885,0.841368146639782,1.18151621739662,2.22126189885925,1.21930890648,1.51239277705261,1.8516997340553,2.11666051608725,3.03879945672079,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.207574695168353,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p4@Nfatc3 | |||
}} |
Revision as of 20:34, 5 August 2015
Short description: | p4@Nfatc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Nfatc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:868 |
Association with transcript: | -5bp_to_ENSMUST00000093190, uc009nfe.2, uc012gjs.1, uc012gjt.1_5end |
EntrezGene: | 18021 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.31e-07 | 3 |
muscle cancer | 1.31e-07 | 3 |